environment.yml

name: SNVCurate
channels:
  - conda-forge
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=0_gnu
  - bzip2=1.0.8=h516909a_2
  - ca-certificates=2020.4.5.1=hecc5488_0
  - certifi=2020.4.5.1=py37hc8dfbb8_0
  - curl=7.68.0=hf8cf82a_0
  - htslib=1.9=h4da6232_3
  - jq=1.6=h14c3975_1000
  - krb5=1.16.4=h2fd8d38_0
  - ld_impl_linux-64=2.34=h53a641e_0
  - libblas=3.8.0=14_openblas
  - libcblas=3.8.0=14_openblas
  - libcurl=7.68.0=hda55be3_0
  - libdeflate=1.5=h516909a_0
  - libedit=3.1.20170329=hf8c457e_1001
  - libffi=3.2.1=he1b5a44_1007
  - libgcc-ng=9.2.0=h24d8f2e_2
  - libgfortran-ng=7.3.0=hdf63c60_5
  - libgomp=9.2.0=h24d8f2e_2
  - liblapack=3.8.0=14_openblas
  - libopenblas=0.3.7=h5ec1e0e_6
  - libssh2=1.8.2=h22169c7_2
  - libstdcxx-ng=9.2.0=hdf63c60_2
  - muse=1.0.rc=hdbcaa40_3
  - ncurses=6.1=hf484d3e_1002
  - numpy=1.18.1=py37h8960a57_1
  - oniguruma=6.9.3=h516909a_0
  - openssl=1.1.1g=h516909a_0
  - pandas=1.0.3=py37h0da4684_0
  - pip=20.0.2=py_2
  - pysam=0.15.4=py37hbcae180_0
  - python=3.7.6=h8356626_5_cpython
  - python-dateutil=2.8.1=py_0
  - python_abi=3.7=1_cp37m
  - pytz=2019.3=py_0
  - readline=8.0=hf8c457e_0
  - samtools=1.9=h10a08f8_12
  - setuptools=46.1.3=py37hc8dfbb8_0
  - six=1.14.0=py_1
  - sqlite=3.30.1=hcee41ef_0
  - tabix=0.2.6=ha92aebf_0
  - tk=8.6.10=hed695b0_0
  - wheel=0.34.2=py_1
  - xz=5.2.4=h516909a_1002
  - zlib=1.2.11=h516909a_1006
prefix: /home/vym1/.conda/envs/SNVCurate