diff --git a/.gitignore b/.gitignore
index 25c2248..e05ceb4 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1,2 +1,3 @@
 supervisord*
 .phpunit.*
+mkdocs/site
diff --git a/mkdocs/Dockerfile b/mkdocs/Dockerfile
new file mode 100644
index 0000000..6b57d2f
--- /dev/null
+++ b/mkdocs/Dockerfile
@@ -0,0 +1,11 @@
+FROM python:3-bookworm
+
+## Install mkdocs
+RUN pip install mkdocs mkdocs-material && mkdocs --version
+
+EXPOSE 8000
+
+## Setup our docs
+RUN mkdir tripal_blast
+COPY . /tripal_blast/
+WORKDIR /tripal_blast
diff --git a/mkdocs/docs/admin/blast-databases.md b/mkdocs/docs/admin/blast-databases.md
new file mode 100644
index 0000000..58d60b6
--- /dev/null
+++ b/mkdocs/docs/admin/blast-databases.md
@@ -0,0 +1,7 @@
+
+# Managing BLAST databases
+
+!!! warning "Under Development"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/docs/admin/config.md b/mkdocs/docs/admin/config.md
new file mode 100644
index 0000000..b00e0a6
--- /dev/null
+++ b/mkdocs/docs/admin/config.md
@@ -0,0 +1,7 @@
+
+# Configuring BLAST
+
+!!! warning "Under Development"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/docs/admin/running-jobs.md b/mkdocs/docs/admin/running-jobs.md
new file mode 100644
index 0000000..9ed6260
--- /dev/null
+++ b/mkdocs/docs/admin/running-jobs.md
@@ -0,0 +1,7 @@
+
+# Running jobs automatically
+
+!!! warning "Under Development"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/docs/index.md b/mkdocs/docs/index.md
new file mode 100644
index 0000000..f9dd08c
--- /dev/null
+++ b/mkdocs/docs/index.md
@@ -0,0 +1,9 @@
+# Overview
+
+This module provides a basic interface to allow your users to utilize your server's NCBI BLAST+.
+
+Specifically it provides blast program-specific forms (blastn, blastp, tblastn, blastx are supported) where users can input their query sequence and choose from an admin configured list of available target databases to align their query sequence against.
+
+BLAST submissions result in the creation of Tripal jobs which then need to run from the command-line. This ensures that long running BLASTs will not cause page time-outs but does add some management overhead and might result in longer waits for users depending on how often you have cron set to run Tripal jobs.
+
+The BLAST results page is an expandable summary table with each hit being listed as a row in the table with query/hit/e-value information. The row can then be expanded to include additional information including the alignment. Download formats are allow users to download these results in the familiar tabular, GFF3 or HTML NCBI formats.
diff --git a/mkdocs/docs/install/composer-install.md b/mkdocs/docs/install/composer-install.md
new file mode 100644
index 0000000..4ad8b4e
--- /dev/null
+++ b/mkdocs/docs/install/composer-install.md
@@ -0,0 +1,6 @@
+
+# Adding Tripal BLAST to an existing site via Composer
+
+!!! warning "Under Development"
+
+    This documentation is still being developed as this module is being upgraded.
diff --git a/mkdocs/docs/install/docker-demo.md b/mkdocs/docs/install/docker-demo.md
new file mode 100644
index 0000000..40b31fe
--- /dev/null
+++ b/mkdocs/docs/install/docker-demo.md
@@ -0,0 +1,6 @@
+
+# Trying out Tripal BLAST with Docker
+
+!!! warning "Under Construction"
+
+    This documentation is still being developed as this module is being upgraded.
diff --git a/mkdocs/docs/users/previous-requests.md b/mkdocs/docs/users/previous-requests.md
new file mode 100644
index 0000000..8662aa2
--- /dev/null
+++ b/mkdocs/docs/users/previous-requests.md
@@ -0,0 +1,7 @@
+
+# Finding previous requests
+
+!!! warning "Under Construction"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/docs/users/result-page.md b/mkdocs/docs/users/result-page.md
new file mode 100644
index 0000000..d827228
--- /dev/null
+++ b/mkdocs/docs/users/result-page.md
@@ -0,0 +1,7 @@
+
+# BLAST result page
+
+!!! warning "Under Construction"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/docs/users/submit-blast.md b/mkdocs/docs/users/submit-blast.md
new file mode 100644
index 0000000..2daec57
--- /dev/null
+++ b/mkdocs/docs/users/submit-blast.md
@@ -0,0 +1,7 @@
+
+# Submitting a BLAST request
+
+!!! warning "Under Construction"
+
+    This documentation is still being developed as this module is being upgraded.
+
diff --git a/mkdocs/mkdocs.yml b/mkdocs/mkdocs.yml
new file mode 100644
index 0000000..e01d4c7
--- /dev/null
+++ b/mkdocs/mkdocs.yml
@@ -0,0 +1,100 @@
+site_name: Tripal BLAST Documentation
+site_url: https://tripal.github.io/tripal_blast
+site_author: Lacey-Anne Sanderson
+site_description: >-
+  Write your documentation in Markdown and create a professional static site in
+  minutes – searchable, customizable, in 60+ languages, for all devices
+
+# Repository
+repo_name: tripal/tripal_blast
+repo_url: https://github.com/tripal/tripal_blast
+
+# Copyright
+copyright: Copyright © 2018 - 2024, Lacey-Anne Sanderson, University of Saskatchewan
+
+nav:
+  - Home: index.md
+  - Installation:
+    - Adding to an existing site: install/composer-install.md
+    - Demonstration via Docker: install/docker-demo.md
+  - Guiding your Users:
+    - Submitting a BLAST request: users/submit-blast.md
+    - Finding previous requests: users/previous-requests.md
+    - BLAST result page: users/result-page.md
+  - Site Administration:
+    - Configuring BLAST: admin/config.md
+    - Managing BLAST databases: admin/blast-databases.md
+    - Running jobs automatically: admin/running-jobs.md
+  # - Customization:
+  #   - Custom Link-outs
+  #   - Custom Styling
+
+# Extensions
+markdown_extensions:
+  - abbr
+  - admonition
+  - attr_list
+  - def_list
+  - footnotes
+  - md_in_html
+  - toc:
+      permalink: true
+  - pymdownx.arithmatex:
+      generic: true
+  - pymdownx.betterem:
+      smart_enable: all
+  - pymdownx.caret
+  - pymdownx.details
+  - pymdownx.emoji:
+      emoji_generator: !!python/name:material.extensions.emoji.to_svg
+      emoji_index: !!python/name:material.extensions.emoji.twemoji
+  - pymdownx.highlight:
+      anchor_linenums: true
+      line_spans: __span
+      pygments_lang_class: true
+  - pymdownx.inlinehilite
+  - pymdownx.keys
+  - pymdownx.magiclink:
+      normalize_issue_symbols: true
+      repo_url_shorthand: true
+      user: squidfunk
+      repo: mkdocs-material
+  - pymdownx.mark
+  - pymdownx.smartsymbols
+  - pymdownx.snippets:
+      auto_append:
+        - includes/mkdocs.md
+  - pymdownx.superfences:
+      custom_fences:
+        - name: mermaid
+          class: mermaid
+          format: !!python/name:pymdownx.superfences.fence_code_format
+  - pymdownx.tabbed:
+      alternate_style: true
+      combine_header_slug: true
+      slugify: !!python/object/apply:pymdownx.slugs.slugify
+        kwds:
+          case: lower
+  - pymdownx.tasklist:
+      custom_checkbox: true
+  - pymdownx.tilde
+
+theme:
+  name: material
+  palette:
+    - media: "(prefers-color-scheme: light)"
+      scheme: default
+      primary: green
+      accent: teal
+      toggle:
+        icon: material/brightness-7
+        name: Switch to dark mode
+
+    # Palette toggle for dark mode
+    - media: "(prefers-color-scheme: dark)"
+      scheme: slate
+      primary: green
+      accent: teal
+      toggle:
+        icon: material/brightness-4
+        name: Switch to light mode