TEi (Transposable element insertion identification) is design to identify TE insertion from paired-end illumina reads, takes whole-exome sequencing (WES), whole-genome sequencing (WGS) and Histone Modification (H3K27ac et al.) data
TEi has been successfully installed on Mac OSX, Linux, and Windows, using the devtools package to install directly from GitHub
devtools::install_github("tchen-tt/TEi")Improvements and new features will be added on a regular basis, please post on the github page with any question or if you would like to contribute.
Please contact us:
Tao Chen: [email protected]
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