pyproject.toml

[build-system]
# Specifies the build backend and its requirements
# Docs: https://python-poetry.org/docs/pyproject/#build-system-table
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.poetry]
# Project metadata
# Docs: https://python-poetry.org/docs/pyproject/#toolpoetryname
package-mode = false
# name = "app"
# version = "0.0.1"
# description = ""
# authors = ["Alan Szmyt <szmyty@gmail.com>"]
readme = "README.md"
packages = [
    { include = "**/*.py", from = "scripts", to = "licenses", format = "sdist" },
    { include = "**/*.py", from = "scripts", to = "licenses", format = "wheel" },
]

[tool.poetry.scripts]
licenses = "scripts.licenses:main"

[tool.poetry.dependencies]
# Project dependencies
# Docs: https://python-poetry.org/docs/pyproject/#dependencies
python = ">=3.10,<3.13"  # Specifies supported Python versions

# Example dependencies
art = "^5.9"
bottleneck = "^1.3.7"
cyberpandas = "^1.1.1"
cython = "^0.29.34"
geopandas = "^0.12.2"
jupyter = "^1.0.0"
jupyter-contrib-nbextensions = "^0.7.0"
jupyterlab = "^3.6.2"
itikz = "^0.1.5"
kaleido = "0.2.1"
lxml = "^4.9.2"
matplotlib = "^3.7.1"
more-itertools = "^9.1.0"
notebook = {version = "^6.5.3", extras = ["json-logging"]}
numpy = "^1.24.2"
pandas = {extras = ["excel"], version = "^2.0.0"}
pandas-path = "^0.3.0"
plotly = "^5.14.1"
plotly-geo = "^1.0.0"
pydantic = "^1.10.6"
pyjanitor = "^0.24.0"
# pylatex = "1.4.0"
pytest = "^7.2.2"
scikit-learn = "^1.2.2"
scipy = "^1.10.1"
seaborn = "^0.12.2"
statistics = "^1.0.3.5"
tabulate = "^0.9.0"
types-tabulate = "^0.9.0.1"
wcmatch = "^8.4.1"
jupyterlab-github = "^3.0.1"
python-dotenv = "^1.0.0"
marshmallow = "^3.19.0"
spotipy = "^2.23.0"
kneed = "^0.8.2"
loguru = "^0.7.0"
pydot = "^1.4.2"
poethepoet = "^0.19.0"
objsize = "^0.7.0"
sqids = "^0.3.0"
pylatex = "^1.4.2"
opensource = "^1.0.2"

[tool.poetry.group.dev.dependencies]
# Development dependencies
# Docs: https://python-poetry.org/docs/pyproject/#development-dependencies
absolufy-imports = "^0.3.1"
bandit = {version = "^1.7.5", extras = ["all"]}
black = {version = "^23.1.0", extras = ["all"]}
codespell = "^2.2.4"
commitizen = "^2.42.1"
coverage = {version = "^7.2.1", extras = ["toml"]}
darglint = "^1.8.1"
docutils = "^0.19"
flake8 = "^6.0.0"
flake8-docstrings = "^1.7.0"
flake8-mutable = "^1.2.0"
flake8-plugin-utils = "^1.3.2"
flake8-pyproject = "^1.2.2"
flake8-rst-docstrings = "^0.3.0"
flynt = "^0.77"
ipykernel = "^6.21.2"
isort = "^5.12.0"
mypy = "^1.1.1"
pdoc = "^13.0.0"
pep8-naming = "^0.13.3"
pre-commit = "^3.1.1"
pre-commit-hooks = "^4.4.0"
py2puml = "^0.7.1"
pycodestyle = "^2.10.0"
pydocstyle = "^6.2.0"
pylic = "^3.5.0"
pylint = "^2.17.0"
pytest-clarity = "^1.0.1"
pytest-cov = "^4.0.0"
pytest-deadfixtures = "^2.2.1"
pytest-dotenv = "^0.5.2"
pytest-forked = "^1.6.0"
pytest-instafail = "^0.4.2"
pytest-isort = "^3.1.0"
pytest-mock = "^3.10.0"
pytest-rerunfailures = "^11.1.2"
pytest-sugar = "^0.9.6"
pytest-xdist = {version = "^3.2.1", extras = ["psutil"]}
pyupgrade = "^3.3.1"
ruff = "^0.0.256"
shellcheck-py = "^0.9.0.2"
typeguard = "^3.0.0"
yesqa = "^1.4.0"

[tool.poetry.group.jupyter.dependencies]
# Jupyter-related dependencies
# Docs: https://python-poetry.org/docs/pyproject/#grouped-dependencies
ipyleaflet = "^0.17.2"
ipymidicontrols = "^0.1.3"
ipytone = "^0.4.1"
ipywidgets = "^8.0.6"
jlab-enhanced-cell-toolbar = "^3.5.1"
jlab-enhanced-launcher = "^3.2.0"
jupyter-archive = "^3.3.4"
jupyterlab-autorun-cells = "^1.0.0"
jupyterlab-autoversion = "^0.3.6"
jupyterlab-cell-flash = "^0.3.5"
jupyterlab-celltests = "^0.1.3"
jupyterlab-code-formatter = "^1.6.0"
jupyterlab-commands = "^0.3.4"
jupyterlab-drawio = "^0.9.0"
jupyterlab-execute-time = "^2.3.1"
jupyterlab-executor = "^2021.1.6"
jupyterlab-favorites = "^3.1.1"
jupyterlab-geojson = "^3.3.1"
jupyterlab-git = "^0.41.0"
jupyterlab-image-editor = "^0.1.0"
jupyterlab-js-logs = "^0.2.6"
jupyterlab-kernelspy = "^3.1.0"
jupyterlab-latex = "^3.1.0"
jupyterlab-logout = "^0.5.0"
jupyterlab-markup = "^2.0.0"
jupyterlab-materialdarker = "^0.6.1"
jupyterlab-nbconvert-nocode = "^0.4.0"
jupyterlab-recents = "^3.2.0"
jupyterlab-search-replace = "^1.0.1"
jupyterlab-spellchecker = "^0.7.3"
jupyterlab-spreadsheet-editor = "^0.6.1"
jupyterlab-system-monitor = "^0.8.0"
jupyterlab-templates = "^0.4.0"
jupyterlab-unfold = "^0.2.2"
lckr-jupyterlab-variableinspector = "^3.0.9"
python-lsp-server = {version = "^1.7.2", extras = ["all"]}
pythreejs = "^2.4.2"
voila = "^0.4.0"

[tool.poetry-exec-plugin.commands]
# Define custom commands to be run using poetry-exec-plugin
# Docs: https://github.com/python-poetry/poetry-exec-plugin
greet = "poetry run poe greet"

[tool.poetry.plugins.dotenv]
location = "app.env"

[tool.jupyter.kernel]
# Jupyter kernel configuration
name = "app-kernel"
display = "app Jupyter Kernel"

[tool.commitizen]
# Configuration for commitizen, a tool for managing conventional commits
# Docs: https://commitizen-tools.github.io/commitizen/config
bump_message = "bump(release): v$current_version -> v$new_version"
tag_format = "v$version"
update_changelog_on_bump = true
version = "0.0.1"
version_files = ["pyproject.toml:version"]

[tool.pytest.ini_options]
# Pytest configuration options
# Docs: https://docs.pytest.org/en/latest/reference/reference.html#ini-options-ref
minversion = "7.0"
pythonpath = "."
testpaths = ["app/tests"]
norecursedirs = ["app/tests/helpers"]
cache_dir = ".cache/.pytest_cache"
addopts = "--color=yes --doctest-modules --exitfirst --failed-first --strict-config --strict-markers --verbosity=2"
xfail_strict = true
console_output_style = "progress"
filterwarnings = [
    "error",
    "ignore::DeprecationWarning"
]
required_plugins = "pytest-clarity>=1.0.1 pytest-cov>=4.0.0 pytest-deadfixtures>=2.2.1 pytest-dotenv>=0.5.2 pytest-forked>=1.6.0 pytest-instafail>=0.4.2 pytest-isort>=3.1.0 pytest-rerunfailures>=11.1.2 pytest-mock>=3.10.0 pytest-sugar>=0.9.6 pytest-xdist>=3.2.1"

[tool.coverage.run]
# Coverage.py run configuration
# Docs: https://coverage.readthedocs.io/en/latest/config.html#run
branch = true
command_line = "--module pytest"
data_file = ".cache/coverage/.coverage"
source = ["."]

[tool.coverage.report]
# Coverage.py report configuration
# Docs: https://coverage.readthedocs.io/en/latest/config.html#report
fail_under = 80
precision = 1
show_missing = true
skip_covered = false
omit = [
    "*conftest*",
    "*/test*",
]
exclude_lines = [
    "if __name__ == .__main__.:",
    "def __subclasshook__",
]

[tool.coverage.html]
# Coverage.py HTML report configuration
# Docs: https://coverage.readthedocs.io/en/latest/config.html#html
directory = ".cache/coverage/reports/html"

[tool.coverage.xml]
# Coverage.py XML report configuration
# Docs: https://coverage.readthedocs.io/en/latest/config.html#xml
output = ".cache/coverage/reports/xml/coverage.xml"

[tool.black]
# Black code formatter configuration
# Docs: https://black.readthedocs.io/en/stable/usage_and_configuration/the_basics.html#configuration-via-a-file
target-version = ["py310"]
line-length = 88
include_trailing_comma = false
include = '\.pyi?$'
exclude = '''
/(
    \.eggs
    | \.git
    | \.hg
    | \.mypy_cache
    | \.ruff_cache
    | \.pytest_cache
    | \.tox
    | \.cache
    | \.venv
    | \.ipynb_checkpoints
    | \.lsp_symlink
    | _build
    | buck-out
    | build
    | dist
    | migrations
    | venv
    # The following are specific to Black, you probably don't want those.
    | blib2to3
    | resources
)/
'''

[tool.isort]
# Isort configuration for sorting imports
# Docs: https://pycqa.github.io/isort/docs/configuration/options.html
profile = "black"
skip = [".venv", "venv", ".cache", "__init__.py"]
skip_glob = ["*__init__.py*"]
atomic = true
color_output = true
use_parentheses = true
multi_line_output = 3
include_trailing_comma = true
force_grid_wrap = 0
line_length = 88
ensure_newline_before_comments = true

[tool.mypy]
# Mypy configuration for static type checking
# Docs: https://mypy.readthedocs.io/en/latest/config_file.html
mypy_path = "."
files = "**/*.py"
exclude = ["venv", ".venv", "resources"]
color_output = true
cache_dir = ".cache/.mypy_cache"
plugins = ["numpy.typing.mypy_plugin", "pydantic.mypy"]
junit_xml = ".cache/coverage/reports/mypy.xml"
html_report = ".cache/coverage/reports/html"
follow_imports = "silent"
strict = true
pretty = true
warn_no_return = true
warn_return_any = true
warn_unreachable = true
warn_unused_configs = true
disallow_untyped_calls = true
disallow_untyped_defs = true
disallow_incomplete_defs = true
check_untyped_defs = true
disallow_untyped_decorators = true
disallow_subclassing_any = true
ignore_missing_imports = true
show_column_numbers = true
show_error_codes = true
show_error_context = true

[tool.pydantic-mypy]
# Pydantic plugin for mypy configuration
# Docs: https://pydantic-docs.helpmanual.io/mypy_plugin/#configuring-the-plugin
init_forbid_extra = true
init_typed = true
warn_required_dynamic_aliases = true
warn_untyped_fields = true

[tool.ruff]
# Ruff linter configuration
# Docs: https://github.com/charliermarsh/ruff
builtins = ["_"]
cache-dir = ".cache/.ruff_cache"
exclude = [
    ".bzr", ".cache", ".coverage", ".direnv", ".eggs", ".env", ".git", ".hg", ".idea",
    ".ipynb_checkpoints", ".mypy_cache", ".nox", ".pants.d", ".pytype", ".ruff_cache",
    ".sha1", ".svn", ".tox", ".venv", "__pycache__", "__pypackages__", "_build",
    "buck-out", "build", "dist", "docker", "docs", "logs", "node_modules", "out",
    "resources", "scripts", "site", "sql", "venv"
]
extend-exclude = ["./config"]
fix = false
fix-only = false
force-exclude = false
output-format = "grouped"
line-length = 88
namespace-packages = []
# required-version = "0.0.256"
respect-gitignore = true
show-fixes = true
src = ["."]
# target-version = "py310"

[tool.ruff.lint]
allowed-confusables = ["−", "ρ", "∗"]
dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
extend-ignore = []
extend-select = ["B", "Q"]
external = []
fixable = [
    "A", "ANN", "ARG", "B", "BLE", "C", "COM", "D", "DTZ", "E", "EM", "ERA", "EXE",
    "F", "FBT", "G", "I", "ICN", "INP", "ISC", "N", "PD", "PGH", "PIE", "PL", "PT",
    "PTH", "Q", "RET", "RUF", "S", "SIM", "T", "TCH", "TID", "TRY", "UP", "W", "YTT"
]
ignore = []
select = ["ALL"]
task-tags = ["TODO", "FIXME", "XXX", "HACK"]
typing-modules = ["airflow.typing_compat"]
unfixable = ["F401"]

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["I001"]
"app/tests/test_app.py" = ["S101"]

[tool.ruff.lint.pydocstyle]
# Pydocstyle configuration for docstring style checking
# Docs: https://github.com/PyCQA/pydocstyle
convention = "google"
ignore-decorators = ["typing.overload"]
property-decorators = []

[tool.ruff.lint.flake8-annotations]
# Flake8 annotations configuration
# Docs: https://github.com/sco1/flake8-annotations
allow-star-arg-any = false
ignore-fully-untyped = false
mypy-init-return = false
suppress-dummy-args = false
suppress-none-returning = false

[tool.ruff.lint.flake8-bandit]
# Flake8 bandit configuration for security checks
# Docs: https://github.com/tylerwince/flake8-bandit
check-typed-exception = false
hardcoded-tmp-directory = ["/tmp", "/var/tmp", "/dev/shm"]

[tool.ruff.lint.flake8-bugbear]
# Flake8 bugbear configuration for finding likely bugs
# Docs: https://github.com/PyCQA/flake8-bugbear
extend-immutable-calls = ["fastapi.Depends", "fastapi.Query"]

[tool.ruff.lint.flake8-builtins]
# Flake8 builtins configuration to avoid shadowing Python builtins
# Docs: https://github.com/gforcada/flake8-builtins
builtins-ignorelist = ["id"]

[tool.ruff.lint.flake8-comprehensions]
# Flake8 comprehensions configuration to simplify comprehensions
# Docs: https://github.com/adamchainz/flake8-comprehensions
allow-dict-calls-with-keyword-arguments = false

[tool.poe]
# Poethepoet configuration for task management
# Docs: https://github.com/nat-n/poethepoet
verbosity = -1
include = ["tasks.toml"]
envfile = "./config/poe.env"

[tool.pylic]
# Pylic configuration for license compliance checks
# Docs: https://github.com/ubersan/pylic
safe_licenses = [
    "Apache 2.0",
    "Apache Software License",
    "BSD 3-Clause",
    "BSD License",
    "BSD",
    "Eclipse Public License 2.0 (EPL-2.0)",
    "GNU General Public License v2 (GPLv2)",
    "GNU Lesser General Public License v2 (LGPLv2)",
    "GNU Library or Lesser General Public License (LGPL)",
    "GPL v2",
    "ISC License (ISCL)",
    "MIT License",
    "Mozilla Public License 2.0 (MPL 2.0)",
    "Public Domain",
    "Python Software Foundation License",
    "The Unlicense (Unlicense)",
    "Historical Permission Notice and Disclaimer (HPND)",
    "GNU Lesser General Public License v3 or later (LGPLv3+)",
    "BSD 3-Clause License",
    "GNU Lesser General Public License v2 or later (LGPLv2+)",
    "MPL-2.0",
    "MIT",
    "Apache License 2.0",
]
unsafe_packages = [
    "kneed",
    "pytoolconfig",
    "app",
    "python-lsp-jsonrpc",
    "ypy-websocket",
    "flynt"
]

[tool.flynt]
# Flynt configuration for converting string formatting to f-strings
# Docs: https://github.com/ikamensh/flynt
line-length = 88
verbose = true
transform-concats = true
exclude = [".venv"]