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counts values changing #10

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amjass12 opened this issue Dec 3, 2024 · 0 comments
Open

counts values changing #10

amjass12 opened this issue Dec 3, 2024 · 0 comments

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@amjass12
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amjass12 commented Dec 3, 2024

Hi!

I am sure I am misunderstanding something but couldn't find any documentation to explain this behaviour. I have found that when i run mousipy as follows:

`from mousipy import translate
adata_sub = translate(adata, stay_sparse=True)
print(np.amin(adata_sub.X)
print(np.amax(adata_sub.X)

0
18.51

#original object
print(np.amin(adata.X)
print(np.amax(adata.X)

0
8.84

`

The MAX value of the norm counts are now different. in fact they are higher than in the original adata object! Is there merging that is carried out by default for common genes /orthologues?

Thank you!

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