diff --git a/ChangeLog-11.0.md b/ChangeLog-11.0.md
index d6d147c3..c75745c9 100644
--- a/ChangeLog-11.0.md
+++ b/ChangeLog-11.0.md
@@ -9,6 +9,10 @@ All notable changes are documented in this file using the [Keep a CHANGELOG](htt
 * [#1037](https://github.com/sebastianbergmann/php-code-coverage/pull/1037): Upgrade Bootstrap to version 5.3.3 for HTML report
 * [#1046](https://github.com/sebastianbergmann/php-code-coverage/pull/1046): CSS fixes for HTML report
 
+### Deprecated
+
+* The `SebastianBergmann\CodeCoverage\Filter::includeUncoveredFiles()`, `SebastianBergmann\CodeCoverage\Filter::excludeUncoveredFiles()`, and `SebastianBergmann\CodeCoverage\Filter::excludeFile()` methods have been deprecated
+
 ## [11.0.6] - 2024-08-22
 
 ### Changed
diff --git a/src/CodeCoverage.php b/src/CodeCoverage.php
index 9c885302..736380f0 100644
--- a/src/CodeCoverage.php
+++ b/src/CodeCoverage.php
@@ -287,11 +287,17 @@ public function disableCheckForUnintentionallyCoveredCode(): void
         $this->checkForUnintentionallyCoveredCode = false;
     }
 
+    /**
+     * @deprecated
+     */
     public function includeUncoveredFiles(): void
     {
         $this->includeUncoveredFiles = true;
     }
 
+    /**
+     * @deprecated
+     */
     public function excludeUncoveredFiles(): void
     {
         $this->includeUncoveredFiles = false;