compile.sh

#!/bin/bash
# main script to compile the anno biblio
# run the the project root
# pass in the name of the driver tex file (anbib)
filename=$1
filename="${filename%.*}"  # strip off any extension

# refresh the annotation files
# the .bib files are the source
cd bibs # outputs files into annos folder below bibs
awk -f ../scripts/x-anno.awk *.bib

# working copy without the annos
awk -f ../scripts/remove-anno.awk *.bib

#create the external annotations by citation
cd ..
scripts/combine-cites.sh

# regenerate the contrib-cites map
#head -n 1  ../contrib-cites.csv > annos/_.csv #grep the header
#cat annos/*.csv > ../contrib-cites.csv #put all into one file
#rm annos/*.csv #clean up
#cd ..

# put the contributors file into order by last name
head -n 1 contributors.csv > tmp
awk -F ',' '{if(NR>1){print $0}}' contributors.csv | sort -t , -k 3 >> tmp
[ -e contributors.old ] && rm contributors.old
mv contributors.csv contributors.old
mv tmp contributors.csv

# regenerate the include file for the contributors
awk -F ',' '{if(NR > 1) {print "\\addbibresource{bibs-no-anno/" $1 ".bib}"}}' contributors.csv > bibs_index.tex

# xelatex allows for modern fonts and unicode
xelatex $filename # first run to prepare for biber
biber $filename
xelatex $filename  # don't recall why there are two more, but it is needed.
xelatex $filename
open $filename.pdf