From d94ae6b8cb7d3e70587897ef09e233f227817363 Mon Sep 17 00:00:00 2001
From: GitHub Actions <actions@github.com>
Date: Fri, 2 Feb 2024 08:57:53 +0000
Subject: [PATCH] Built site for rj: 0.2.30@26b49ae

---
 articles/associate_editors_guide.html | 4 ++--
 articles/editor_in_chief_guide.html   | 4 ++--
 articles/editors_guide.html           | 4 ++--
 pkgdown.yml                           | 2 +-
 4 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/articles/associate_editors_guide.html b/articles/associate_editors_guide.html
index 1adcfce..dcfd580 100644
--- a/articles/associate_editors_guide.html
+++ b/articles/associate_editors_guide.html
@@ -189,8 +189,8 @@ <h3 id="workflow">Workflow<a class="anchor" aria-label="anchor" href="#workflow"
 </ul>
 </li>
 </ul>
-<div class="grViz html-widget html-fill-item" id="htmlwidget-e829ef7de997d17fdc15" style="width:768px;height:1152px;"></div>
-<script type="application/json" data-for="htmlwidget-e829ef7de997d17fdc15">{"x":{"diagram":"digraph {\n\ngraph [layout = \"dot\",\n       rankdir = \"TB\",\n       outputorder = \"edgesfirst\",\n       bgcolor = \"white\"]\n\nnode [fontname = \"Helvetica\",\n      fontsize = \"10\",\n      shape = \"circle\",\n      fixedsize = \"true\",\n      width = \"0.5\",\n      style = \"filled\",\n      fillcolor = \"aliceblue\",\n      color = \"gray70\",\n      fontcolor = \"gray50\"]\n\nedge [fontname = \"Helvetica\",\n     fontsize = \"8\",\n     len = \"1.5\",\n     color = \"gray80\",\n     arrowsize = \"0.5\"]\n\n  \"1\" [label = \"Send for review?\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"2\" [label = \"Select reviewer (ideally two), rj::match_keywords() or use your own experts\", shape = \"rectangle\", width = \"5\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"3\" [label = \"Update reviewer in DESCRIPTION, rj::add_reviewer() \n This also generates the correspondence folder, containing the email template\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"4\" [label = \"Send email to reviewers, which includes motivating letter, pdf and R files \n rj::update_status() to out for review\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"5\" [label = \"Check all file changes into GitHub, \n including correspondence folder\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"6\" [label = \"Reviewer agreed (1 week)? \n Use agree_reviewer() or\n decline_reviewer()\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"7\" [label = \"Reviews received\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"8\" [label = \"Save reviews into correspondence folder, rj::add_review()\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"9\" [label = \"Make recommendation (AE: major revision, AE: minor revision, AE: accept or AE: reject),\n update DESCRIPTION using rj::update_status(), notify editor, check all into GitHub\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#76EEC6\"] \n  \"10\" [label = \"Send reminder email\", shape = \"rectangle\", width = \"2\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n\"1\"->\"2\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"3\" [label = \".\", color = \"grey50\"] \n\"3\"->\"4\" [label = \".\", color = \"grey50\"] \n\"4\"->\"5\" [label = \".\", color = \"grey50\"] \n\"5\"->\"6\" [label = \".\", color = \"grey50\"] \n\"6\"->\"7\" [label = \"Y\", color = \"dodgerblue2\"] \n\"7\"->\"8\" [label = \"Y\", color = \"dodgerblue2\"] \n\"8\"->\"9\" [label = \".\", color = \"grey50\"] \n\"6\"->\"2\" [label = \"N\", color = \"red\"] \n\"7\"->\"10\" [label = \"N\", color = \"red\"] \n\"10\"->\"7\" [label = \"done\", color = \"grey50\"] \n\"1\"->\"9\" [label = \"N\", color = \"red\"] \n}","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script>
+<div class="grViz html-widget html-fill-item" id="htmlwidget-55df89d19a40825a7ae2" style="width:768px;height:1152px;"></div>
+<script type="application/json" data-for="htmlwidget-55df89d19a40825a7ae2">{"x":{"diagram":"digraph {\n\ngraph [layout = \"dot\",\n       rankdir = \"TB\",\n       outputorder = \"edgesfirst\",\n       bgcolor = \"white\"]\n\nnode [fontname = \"Helvetica\",\n      fontsize = \"10\",\n      shape = \"circle\",\n      fixedsize = \"true\",\n      width = \"0.5\",\n      style = \"filled\",\n      fillcolor = \"aliceblue\",\n      color = \"gray70\",\n      fontcolor = \"gray50\"]\n\nedge [fontname = \"Helvetica\",\n     fontsize = \"8\",\n     len = \"1.5\",\n     color = \"gray80\",\n     arrowsize = \"0.5\"]\n\n  \"1\" [label = \"Send for review?\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"2\" [label = \"Select reviewer (ideally two), rj::match_keywords() or use your own experts\", shape = \"rectangle\", width = \"5\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"3\" [label = \"Update reviewer in DESCRIPTION, rj::add_reviewer() \n This also generates the correspondence folder, containing the email template\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"4\" [label = \"Send email to reviewers, which includes motivating letter, pdf and R files \n rj::update_status() to out for review\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"5\" [label = \"Check all file changes into GitHub, \n including correspondence folder\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"6\" [label = \"Reviewer agreed (1 week)? \n Use agree_reviewer() or\n decline_reviewer()\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"7\" [label = \"Reviews received\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"8\" [label = \"Save reviews into correspondence folder, rj::add_review()\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"9\" [label = \"Make recommendation (AE: major revision, AE: minor revision, AE: accept or AE: reject),\n update DESCRIPTION using rj::update_status(), notify editor, check all into GitHub\", shape = \"rectangle\", width = \"6\", fontcolor = \"black\", fillcolor = \"#76EEC6\"] \n  \"10\" [label = \"Send reminder email\", shape = \"rectangle\", width = \"2\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n\"1\"->\"2\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"3\" [label = \".\", color = \"grey50\"] \n\"3\"->\"4\" [label = \".\", color = \"grey50\"] \n\"4\"->\"5\" [label = \".\", color = \"grey50\"] \n\"5\"->\"6\" [label = \".\", color = \"grey50\"] \n\"6\"->\"7\" [label = \"Y\", color = \"dodgerblue2\"] \n\"7\"->\"8\" [label = \"Y\", color = \"dodgerblue2\"] \n\"8\"->\"9\" [label = \".\", color = \"grey50\"] \n\"6\"->\"2\" [label = \"N\", color = \"red\"] \n\"7\"->\"10\" [label = \"N\", color = \"red\"] \n\"10\"->\"7\" [label = \"done\", color = \"grey50\"] \n\"1\"->\"9\" [label = \"N\", color = \"red\"] \n}","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script>
 </div>
 <div class="section level3">
 <h3 id="package-usage">Package usage<a class="anchor" aria-label="anchor" href="#package-usage"></a>
diff --git a/articles/editor_in_chief_guide.html b/articles/editor_in_chief_guide.html
index 2162bb5..3422704 100644
--- a/articles/editor_in_chief_guide.html
+++ b/articles/editor_in_chief_guide.html
@@ -135,8 +135,8 @@ <h2 id="workflow-and-operations">Workflow and operations<a class="anchor" aria-l
 <div class="section level3">
 <h3 id="workflow">Workflow<a class="anchor" aria-label="anchor" href="#workflow"></a>
 </h3>
-<div id="htmlwidget-45bdfbf630e717b0dcf4" style="width:400px;height:400px;" class="grViz html-widget"></div>
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+<div id="htmlwidget-5aeb101821d34111a4ff" style="width:400px;height:400px;" class="grViz html-widget"></div>
+<script type="application/json" data-for="htmlwidget-5aeb101821d34111a4ff">{"x":{"diagram":"digraph {\n\ngraph [layout = \"dot\",\n       rankdir = \"TB\",\n       outputorder = \"edgesfirst\",\n       bgcolor = \"white\"]\n\nnode [fontname = \"Helvetica\",\n      fontsize = \"10\",\n      shape = \"circle\",\n      fixedsize = \"true\",\n      width = \"0.5\",\n      style = \"filled\",\n      fillcolor = \"aliceblue\",\n      color = \"gray70\",\n      fontcolor = \"gray50\"]\n\nedge [fontname = \"Helvetica\",\n     fontsize = \"8\",\n     len = \"1.5\",\n     color = \"gray80\",\n     arrowsize = \"0.5\"]\n\n  \"1\" [label = \"check for new submissions or revisions get_submissions()\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"2\" [label = \"is this?\", shape = \"ellipse\", width = \"1\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"3\" [label = \"examine article: should \n the paper progress \n to review?\", shape = \"rectangle\", width = \"2\", fontcolor = \"black\", fillcolor = \"#FA8072\"] \n  \"4\" [label = \"assign to an EE or to self\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"5\" [label = \"acknowledge paper, Cc handling EE \n acknowledge_submission() \n acknowledge_revision()\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"6\" [label = \"acknowledge revision received, \n Cc handling EE\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#40E0D0\"] \n\"1\"->\"2\" [label = \".\"] \n\"2\"->\"3\" [label = \"new submission\"] \n\"3\"->\"4\" [label = \".\"] \n\"4\"->\"5\" [label = \".\"] \n\"2\"->\"6\" [label = \"revision\"] \n}","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script>
 </div>
 </div>
 <div class="section level2">
diff --git a/articles/editors_guide.html b/articles/editors_guide.html
index fb88ec0..fafde48 100644
--- a/articles/editors_guide.html
+++ b/articles/editors_guide.html
@@ -214,8 +214,8 @@ <h3 id="timeline-for-reviews">Timeline for reviews<a class="anchor" aria-label="
 <div class="section level3">
 <h3 id="workflow">Workflow<a class="anchor" aria-label="anchor" href="#workflow"></a>
 </h3>
-<div class="grViz html-widget html-fill-item" id="htmlwidget-a9170e7068066f19ae27" style="width:768px;height:1152px;"></div>
-<script type="application/json" data-for="htmlwidget-a9170e7068066f19ae27">{"x":{"diagram":"digraph {\n\ngraph [layout = \"dot\",\n       rankdir = \"TB\",\n       outputorder = \"edgesfirst\",\n       bgcolor = \"white\"]\n\nnode [fontname = \"Helvetica\",\n      fontsize = \"10\",\n      shape = \"circle\",\n      fixedsize = \"true\",\n      width = \"0.5\",\n      style = \"filled\",\n      fillcolor = \"aliceblue\",\n      color = \"gray70\",\n      fontcolor = \"gray50\"]\n\nedge [fontname = \"Helvetica\",\n     fontsize = \"8\",\n     len = \"1.5\",\n     color = \"gray80\",\n     arrowsize = \"0.5\"]\n\n  \"1\" [label = \"is this a new submission?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"2\" [label = \"examine article: should the paper progress to review?\", shape = \"ellipse\", width = \"5\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"3\" [label = \"is there a suitable AE?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"4\" [label = \"update status to be `with AE`, update_status(), copy folder to AEs repo\", shape = \"rectangle\", width = \"5\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"5\" [label = \"message/email AE\", shape = \"rectangle\", width = \"2\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"6\" [label = \"has AE returned reviews and decision?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"7\" [label = \"add_review() to correspondence folder, send decision to author, \n with reviews if appropriate, update_status(), \n notify and thank AE about decision, if appropriate\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#FA8072\"] \n  \"8\" [label = \"is the revision adequate?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"9\" [label = \"should it go back to AE?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"10\" [label = \"reject(), contact authors\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FA8072\"] \n  \"11\" [label = \"act as AE, find reviewers, update status, follow AE flow chart\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#40E0D0\"] \n\"1\"->\"2\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"3\" [label = \"Y\", color = \"dodgerblue2\"] \n\"3\"->\"4\" [label = \"Y\", color = \"dodgerblue2\"] \n\"4\"->\"5\" [label = \".\", color = \"grey50\"] \n\"5\"->\"6\" [label = \".\", color = \"grey50\"] \n\"6\"->\"7\" [label = \"Y\", color = \"dodgerblue2\"] \n\"1\"->\"8\" [label = \"N\", color = \"red\"] \n\"8\"->\"9\" [label = \"Y\", color = \"dodgerblue2\"] \n\"8\"->\"10\" [label = \"N\", color = \"red\"] \n\"9\"->\"7\" [label = \"N\", color = \"red\"] \n\"9\"->\"4\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"10\" [label = \"N\", color = \"red\"] \n\"3\"->\"11\" [label = \"N\", color = \"red\"] \n\"6\"->\"5\" [label = \"N\", color = \"red\"] \n}","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script>
+<div class="grViz html-widget html-fill-item" id="htmlwidget-05bd61f06b52ce42f287" style="width:768px;height:1152px;"></div>
+<script type="application/json" data-for="htmlwidget-05bd61f06b52ce42f287">{"x":{"diagram":"digraph {\n\ngraph [layout = \"dot\",\n       rankdir = \"TB\",\n       outputorder = \"edgesfirst\",\n       bgcolor = \"white\"]\n\nnode [fontname = \"Helvetica\",\n      fontsize = \"10\",\n      shape = \"circle\",\n      fixedsize = \"true\",\n      width = \"0.5\",\n      style = \"filled\",\n      fillcolor = \"aliceblue\",\n      color = \"gray70\",\n      fontcolor = \"gray50\"]\n\nedge [fontname = \"Helvetica\",\n     fontsize = \"8\",\n     len = \"1.5\",\n     color = \"gray80\",\n     arrowsize = \"0.5\"]\n\n  \"1\" [label = \"is this a new submission?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"2\" [label = \"examine article: should the paper progress to review?\", shape = \"ellipse\", width = \"5\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"3\" [label = \"is there a suitable AE?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"4\" [label = \"update status to be `with AE`, update_status(), copy folder to AEs repo\", shape = \"rectangle\", width = \"5\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"5\" [label = \"message/email AE\", shape = \"rectangle\", width = \"2\", fontcolor = \"black\", fillcolor = \"#E5E5E5\"] \n  \"6\" [label = \"has AE returned reviews and decision?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"7\" [label = \"add_review() to correspondence folder, send decision to author, \n with reviews if appropriate, update_status(), \n notify and thank AE about decision, if appropriate\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#FA8072\"] \n  \"8\" [label = \"is the revision adequate?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"9\" [label = \"should it go back to AE?\", shape = \"ellipse\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FFA500\"] \n  \"10\" [label = \"reject(), contact authors\", shape = \"rectangle\", width = \"3\", fontcolor = \"black\", fillcolor = \"#FA8072\"] \n  \"11\" [label = \"act as AE, find reviewers, update status, follow AE flow chart\", shape = \"rectangle\", width = \"4\", fontcolor = \"black\", fillcolor = \"#40E0D0\"] \n\"1\"->\"2\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"3\" [label = \"Y\", color = \"dodgerblue2\"] \n\"3\"->\"4\" [label = \"Y\", color = \"dodgerblue2\"] \n\"4\"->\"5\" [label = \".\", color = \"grey50\"] \n\"5\"->\"6\" [label = \".\", color = \"grey50\"] \n\"6\"->\"7\" [label = \"Y\", color = \"dodgerblue2\"] \n\"1\"->\"8\" [label = \"N\", color = \"red\"] \n\"8\"->\"9\" [label = \"Y\", color = \"dodgerblue2\"] \n\"8\"->\"10\" [label = \"N\", color = \"red\"] \n\"9\"->\"7\" [label = \"N\", color = \"red\"] \n\"9\"->\"4\" [label = \"Y\", color = \"dodgerblue2\"] \n\"2\"->\"10\" [label = \"N\", color = \"red\"] \n\"3\"->\"11\" [label = \"N\", color = \"red\"] \n\"6\"->\"5\" [label = \"N\", color = \"red\"] \n}","config":{"engine":"dot","options":null}},"evals":[],"jsHooks":[]}</script>
 </div>
 <div class="section level3">
 <h3 id="dealing-with-problematic-authors">Dealing with problematic authors<a class="anchor" aria-label="anchor" href="#dealing-with-problematic-authors"></a>
diff --git a/pkgdown.yml b/pkgdown.yml
index b82dc78..0e1305a 100644
--- a/pkgdown.yml
+++ b/pkgdown.yml
@@ -7,7 +7,7 @@ articles:
   editors_guide: editors_guide.html
   issue_build_guide: issue_build_guide.html
   website_build_guide: website_build_guide.html
-last_built: 2024-02-02T08:49Z
+last_built: 2024-02-02T08:57Z
 urls:
   reference: https://rjournal.github.io/rj/reference
   article: https://rjournal.github.io/rj/articles