Merge pull request #262 from nbelakovski-mssm/update_docker_docs #48

	name: Update Docs

	on:
	push:
	branches: [master]

	jobs:
	generate-docs:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3
	with:
	ref: "gh-pages"

	- name: Create conda environment
	run: conda create --quiet -c conda-forge --name deid

	- name: Install deid
	run: \|
	export PATH="/usr/share/miniconda/bin:$PATH"
	root=$PWD
	source activate deid
	cd /tmp
	git clone https://github.com/pydicom/deid
	cd deid
	pip install -e .
	pip install deid-data
	cd ./docs
	pip install -r api_docs/docs-requirements.txt
	/bin/bash ./apidoc.sh
	cd ../
	mv $root/.git ./docs/api_docs/.git
	rm -rf $root
	mv ./docs/api_docs $root
	cd $root
	ls -a
	git add .
	git status
	git config --global user.name "github-actions"
	git config --global user.email "[email protected]"
	git config --global pull.rebase true

	if git diff-index --quiet HEAD --; then
	printf "No changes\n"
	else
	printf "Changes\n"
	git commit -a -m "Adding changed documentation files"
	git push origin gh-pages \|\| echo "up to date"
	fi

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