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editor.py
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editor.py
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# -*- coding: utf-8 -*-
# Owlready2
# Copyright (C) 2013-2019 Jean-Baptiste LAMY
# LIMICS (Laboratoire d'informatique médicale et d'ingénierie des connaissances en santé), UMR_S 1142
# University Paris 13, Sorbonne paris-Cité, Bobigny, France
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
# You should have received a copy of the GNU Lesser General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
from collections import defaultdict
from functools import reduce
import editobj3, editobj3.introsp as introsp, editobj3.field as field, editobj3.editor as editor
from owlready2 import *
from owlready2.base import _universal_datatype_2_abbrev
from owlready2.prop import _CLASS_PROPS, _TYPE_PROPS
IGNORE_DOMAINLESS_PROPERTY = False
introsp.def_attr("topObjectProperty", field.HiddenField)
def _keep_most_generic(s):
r = set()
for i in s:
for parent in i.is_a:
if parent in s: break
else: r.add(i)
return r
#def _available_ontologies(o):
# return sorted(o.ontology.indirectly_imported_ontologies(), key = lambda x: x.name)
def _available_classes():
#r = set()
#for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.classes)
r = default_world.search(subclass_of = Thing)
return sorted(_keep_most_generic(r), key = lambda x: str(x))
#def _available_properties(o):
# r = set()
# for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.properties)
# return sorted(_keep_most_generic(r), key = lambda x: str(x))
#def _available_properties_and_types(o):
# return [FunctionalProperty, InverseFunctionalProperty, TransitiveProperty, SymmetricProperty, AsymmetricProperty, ReflexiveProperty, IrreflexiveProperty] + _available_properties(o)
#def _available_classes_and_datatypes(o):
# r = set()
# for ontology in o.ontology.indirectly_imported_ontologies():
# r.update(ontology.classes)
# r = _keep_most_generic(r)
# r.update(owlready._PYTHON_2_DATATYPES.keys())
# return sorted(r, key = lambda x: str(x))
def _get_label(o): return str(o).replace("_", " ")
#descr = introsp.description(EntityClass)
#descr.def_attr("ontology" , field.HiddenField)
#descr = introsp.description_for_type(Thing)
##descr.def_attr("ontology" , field.ObjectSelectorField, addable_values = _available_ontologies)
#descr.def_attr("namespace" , field.HiddenField)
#descr.def_attr("name" , field.StringField)
#descr.def_attr("python_name" , field.StringField)
#descr.def_attr("is_a" , field.HierarchyAndObjectListField, addable_values = _available_classes)
#descr.def_attr("equivalent_to", field.HierarchyAndObjectListField, addable_values = _available_classes)
#descr.set_label(_get_label)
#descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_class.svg"))
#descr = introsp.description_for_type(Property)
##descr.def_attr("ontology" , field.ObjectSelectorField, addable_values = _available_ontologies)
#descr.def_attr("namespace" , field.HiddenField)
#descr.def_attr("name" , field.StringField)
#descr.def_attr("python_name" , field.StringField)
#descr.def_attr("is_a" , field.HierarchyAndObjectListField, addable_values = _available_properties_and_types)
#descr.def_attr("domain" , field.HierarchyAndObjectListField, addable_values = _available_classes , reorder_method = None)
#descr.def_attr("range" , field.HierarchyAndObjectListField, addable_values = _available_classes_and_datatypes, reorder_method = None)
#descr.def_attr("inverse_property", field.ObjectSelectorField , addable_values = lambda o: [None] + _available_properties(o))
#descr.def_attr("equivalent_to" , field.HierarchyAndObjectListField, addable_values = _available_properties_and_types)
#descr.set_label(_get_label)
#descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_property.svg"))
descr = introsp.description(Thing)
descr.def_attr("iri" , field.StringField)
descr.def_attr("namespace" , field.HiddenField)
descr.def_attr("is_a" , field.HiddenField)
descr.def_attr("is_instance_of" , field.HiddenField)
descr.def_attr("name" , field.HiddenField)
descr.def_attr("storid" , field.HiddenField)
descr.def_attr("equivalent_to" , field.HiddenField)
descr.def_attr("properties" , field.HiddenField)
descr.def_attr("inverse_properties", field.HiddenField)
descr.set_label(_get_label)
descr.set_icon_filename(os.path.join(os.path.dirname(__file__), "icons", "owl_instance.svg"))
descr.set_constructor(introsp.Constructor(lambda Class, parent: Class(namespace = parent.namespace)))
introsp.MAX_NUMBER_OF_ATTRIBUTE_FOR_EMBEDDING = 0
def _get_priority(Prop):
return Prop.editobj_priority.first()
def _intersect_reduce(s):
if not s: return set()
if len(s) == 1: return s[0]
return reduce(set.intersection, s)
def _flattened_or(Classes):
if Classes: yield from _flattened_or_iteration(Classes)
else: yield Thing
def _flattened_or_iteration(Classes):
for Class in Classes:
if isinstance(Class, ThingClass): yield Class
elif isinstance(Class, Or): yield from _flattened_or_iteration(Class.Classes)
def _get_class_one_of(Class):
if isinstance(Class, OneOf): return Class.instances
if isinstance(Class, ThingClass):
s = []
for ancestor in Class.ancestors():
for superclass in ancestor.is_a + ancestor.equivalent_to:
if isinstance(superclass, OneOf): s.append(superclass.instances)
return _intersect_reduce(s)
def _prop_use_children_group(Prop, domain):
for superprop in Prop.mro():
if (superprop in _CLASS_PROPS) or (superprop in _TYPE_PROPS): continue
if isinstance(superprop, PropertyClass) and not superprop.is_functional_for(domain): return True
for range in _flattened_or(Prop.range):
if isinstance(range, ThingClass) and _has_object_property(range): return True
return False
def _has_object_property(Class):
for Prop in Class._get_class_possible_relations():
if not isinstance(Prop, DataPropertyClass): return True
return False
def _is_abstract_class(Class):
for superclass in Class.is_a + list(Class.equivalent_to.indirect()):
if isinstance(superclass, Or):
for or_class in superclass.Classes:
if not isinstance(or_class, ThingClass): break
else: return True
def configure_editobj_from_ontology(onto):
introsp._init_for_owlready2()
for Prop in onto.properties():
if len(Prop.range) != 1: continue
if isinstance(Prop, DataPropertyClass): ranges = [Prop.range[0]]
else: ranges = list(_flattened_or(Prop.range))
if not ranges: continue
priority = _get_priority(Prop)
for domain in _flattened_or(Prop.domain):
if isinstance(domain, ThingClass):
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceOnly(Prop, domain, one_of)
else: RangeClassOnly (Prop, domain, ranges)
for Class in onto.classes():
for superclass in Class.is_a: _configure_class_restriction(Class, superclass)
for superclass in Class.equivalent_to.indirect(): _configure_class_restriction(Class, superclass)
for prop_children_group in PROP_CHILDREN_GROUPS.values():
if prop_children_group.changed: prop_children_group.define_children_groups()
def _configure_class_restriction(Class, restriction):
if isinstance(restriction, And):
for sub_restriction in restriction.Classes:
_configure_class_restriction(Class, sub_restriction)
elif isinstance(restriction, Restriction):
if restriction.type == "VALUE":
introsp.description(Class).def_attr(restriction.Prop.python_name, field.LabelField, priority = _get_priority(restriction.Prop))
elif restriction.type == "ONLY":
if isinstance(restriction.Prop, ObjectPropertyClass):
if isinstance(restriction.Class, ThingClass):
ranges = [restriction.Class]
elif isinstance(restriction.Class, LogicalClassConstruct):
ranges = list(_flattened_or(restriction.Class.Classes))
else: return
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceOnly(restriction.Prop, Class, one_of)
else: RangeClassOnly (restriction.Prop, Class, ranges)
elif (restriction.type == "EXACTLY") or (restriction.type == "MAX"):
# These restrictions can make the Property functional for the given Class
# => Force the redefinition of the field type by creating an empty range restriction list
if restriction.cardinality == 1:
for subprop in restriction.Prop.descendants(include_self = False):
prop_children_group = get_prop_children_group(subprop)
prop_children_group.range_restrictions[Class] # Create the list if not already existent
prop_children_group.changed = True
elif isinstance(restriction, Not):
for sub_restriction in _flattened_or([restriction.Class]):
if isinstance(sub_restriction, Restriction):
if sub_restriction.type == SOME and isinstance(sub_restriction.Prop, ObjectPropertyClass):
ranges = list(_flattened_or([sub_restriction.Class]))
if len(ranges) == 1: one_of = _get_class_one_of(ranges[0])
else: one_of = None
if one_of: RangeInstanceExclusion(sub_restriction.Prop, Class, one_of)
else: RangeClassExclusion (sub_restriction.Prop, Class, ranges)
PROP_CHILDREN_GROUPS = {}
def get_prop_children_group(Prop): return PROP_CHILDREN_GROUPS.get(Prop) or PropChildrenGroup(Prop)
class PropChildrenGroup(object):
def __init__(self, Prop):
self.Prop = Prop
self.range_restrictions = defaultdict(list)
self.changed = False
PROP_CHILDREN_GROUPS[Prop] = self
def define_children_groups(self):
self.changed = False
priority = _get_priority(self.Prop)
for domain in set(self.range_restrictions):
descr = introsp.description(domain)
functional = self.Prop.is_functional_for(domain)
range_restrictions = set()
for superclass in domain.mro():
s = self.range_restrictions.get(superclass)
if s: range_restrictions.update(s)
range_instance_onlys = { range_restriction for range_restriction in range_restrictions if isinstance(range_restriction, RangeInstanceOnly) }
if range_instance_onlys:
instances = _intersect_reduce([i.ranges for i in range_instance_onlys])
d = { instance.name : instance for instance in instances }
if functional:
d["None"] = None
descr.def_attr(self.Prop.python_name, field.EnumField(d), priority = priority, optional = False)
else:
descr.def_attr(self.Prop.python_name, field.EnumListField(d), priority = priority, optional = False)
else:
if isinstance(self.Prop, DataPropertyClass):
datatype = None
for range_restriction in range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
if range in _universal_datatype_2_abbrev:
datatype = range
break
if datatype:
if datatype is int:
if functional: descr.def_attr(self.Prop.python_name, field.IntField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.IntListField , optional = False, priority = priority)
elif datatype is float:
if functional: descr.def_attr(self.Prop.python_name, field.FloatField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.FloatListField , optional = False, priority = priority)
elif datatype is normstr:
if functional: descr.def_attr(self.Prop.python_name, field.StringField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.StringListField, optional = False, priority = priority)
elif datatype is str:
if functional: descr.def_attr(self.Prop.python_name, field.TextField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.StringListField, optional = False, priority = priority)
elif datatype is bool:
if functional: descr.def_attr(self.Prop.python_name, field.BoolField , optional = False, priority = priority)
else:
if functional: descr.def_attr(self.Prop.python_name, field.EntryField , allow_none = True, optional = False, priority = priority)
else: descr.def_attr(self.Prop.python_name, field.EntryListField , optional = False, priority = priority)
else:
values_lister = ValuesLister(self.Prop, domain, range_restrictions)
if _prop_use_children_group(self.Prop, domain) or values_lister.values_have_children():
if self.Prop.inverse: inverse_attr = self.Prop.inverse.python_name
else: inverse_attr = ""
if functional: field_class = field.HierarchyOrObjectSelectorField
else: field_class = field.HierarchyOrObjectListField
descr.def_attr(self.Prop.python_name,
field_class,
addable_values = values_lister.available_values,
inverse_attr = inverse_attr,
priority = priority)
else:
descr.def_attr(self.Prop.python_name,
field.ObjectSelectorField,
addable_values = values_lister.available_values,
priority = priority)
class RangeRestriction(object):
def __init__(self, Prop, domain, ranges):
self.domain = domain
self.ranges = ranges
for subprop in Prop.descendants(include_self = True):
prop_children_group = get_prop_children_group(subprop)
prop_children_group.range_restrictions[domain].append(self)
prop_children_group.changed = True
def __repr__(self): return "<%s %s %s>" % (self.__class__.__name__, self.domain, self.ranges)
def get_classes(self):
available_classes = set()
for range in self.ranges:
for subrange in range.descendants(): available_classes.add(subrange)
return available_classes
class RangeClassOnly (RangeRestriction): pass
class RangeClassExclusion (RangeRestriction): pass
class RangeInstanceOnly (RangeRestriction): pass
class RangeInstanceExclusion(RangeRestriction): pass
VALUES_LISTERS = {}
class ValuesLister(object):
def __init__(self, Prop, domain, range_restrictions):
self.Prop = Prop
self.domain = domain
self.range_restrictions = range_restrictions
VALUES_LISTERS[Prop, domain] = self
def values_have_children(self):
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
for subrange in range.descendants():
for attribute in introsp.description(subrange).attributes.values():
try: return issubclass(attribute.field_class, FieldInHierarchyPane)
except: return False # attribute.field_class if a func and not a class
def available_values(self, subject):
available_classes = []
excluded_classes = set()
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
available_classes.append(range_restriction.get_classes())
elif isinstance(range_restriction, RangeClassExclusion):
excluded_classes.update(range_restriction.get_classes())
available_classes = _intersect_reduce(available_classes)
available_classes.difference_update(excluded_classes)
available_classes = sorted(available_classes, key = lambda Class: Class.name)
new_instances_of = [introsp.NewInstanceOf(Class) for Class in available_classes if (not _get_class_one_of(Class)) and (not _is_abstract_class(Class))]
existent_values = set()
for Class in available_classes:
existent_values.update(default_world.search(type = Class))
if excluded_classes:
excluded_classes = tuple(excluded_classes)
existent_values = [o for o in existent_values if not isinstance(o, excluded_classes)]
# For InverseFunctional props, remove values already used.
if issubclass(self.Prop, InverseFunctionalProperty) and self.Prop.inverse_property:
existent_values = { value for value in existent_values
if not getattr(value, self.Prop.inverse_property.python_name) }
existent_values = sorted(existent_values, key = lambda obj: obj.name)
return new_instances_of + existent_values
def range_match_classes(self, classes):
classes = tuple(classes)
for range_restriction in self.range_restrictions:
if isinstance(range_restriction, RangeClassOnly):
for range in range_restriction.ranges:
if issubclass(range, classes): return True