Skip to content

Giotto Suite is a major upgrade to the Giotto package that provides tools to process, analyze and visualize spatial multi-omics data at all scales and multiple resolutions.

License

Notifications You must be signed in to change notification settings

pscedu/singularity-giotto

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

5 Commits
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Status Status Issue forks Stars License

singularity-giotto

Giotto Suite Singularity recipe for giotto.

Installing the container on BRAIN

Copy the

  • SIF file
  • and the 'giotto` script

to /bil/packages/giotto/4.0.5.

Copy the file modulefile.lua to /bil/modulefiles/eog as 4.0.5.lua.

Building the image using the recipe

To build the image locally

Run the script build.sh to build image locally.

bash ./build.sh

To build the image remotely

Run the script rbuild.sh to build image locally.

bash ./rbuild.sh

Copyright © 2024 Pittsburgh Supercomputing Center. All Rights Reserved.

The Biomedical Applications Group at the Pittsburgh Supercomputing Center in the Mellon College of Science at Carnegie Mellon University.

About

Giotto Suite is a major upgrade to the Giotto package that provides tools to process, analyze and visualize spatial multi-omics data at all scales and multiple resolutions.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published