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    23 repositories

    • ldapauthenticator

      Public
      LDAP Authenticator Plugin for Jupyter
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •178•0•0•0•Updated Jun 15, 2017Jun 15, 2017

    • jbrowse

      Public
      A modern genome browser built with JavaScript and HTML5.
      JavaScript
      •
      Other
      •199•0•0•0•Updated Apr 9, 2015Apr 9, 2015

    • allbiotc2

      Public
      Benchmark pipeline for Structural Variation analyses, funded by the ALLBio
      Python
      •12•0•0•0•Updated Apr 22, 2014Apr 22, 2014

    • enter

      Public
      Add a bug report to ask to join the group
      1•0•0•0•Updated Apr 15, 2014Apr 15, 2014

    • viz.js

      Public
      A hack to put GraphViz on the web.
      C
      •
      Other
      •353•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • docker

      Public
      Docker - the open-source application container engine
      Go
      •
      Apache License 2.0
      •19k•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • learn.jquery.com

      Public
      jQuery Learning Center web site content
      JavaScript
      •
      Other
      •482•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • scythe

      Public
      A 3'-end adapter contaminant trimmer
      TeX
      •
      MIT License
      •38•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • d3

      Public
      A JavaScript visualization library for HTML and SVG.
      JavaScript
      •
      Other
      •23k•0•0•0•Updated Apr 14, 2014Apr 14, 2014

    • sga

      Public
      de novo sequence assembler using string graphs
      C++
      •82•0•0•0•Updated Apr 11, 2014Apr 11, 2014

    • Jellyfish

      Public
      A fast multi-threaded k-mer counter
      C++
      •
      GNU General Public License v3.0
      •137•0•0•0•Updated Apr 11, 2014Apr 11, 2014

    • samtools

      Public
      This is the official development repository for samtools.
      C
      •
      MIT License
      •580•0•0•0•Updated Apr 10, 2014Apr 10, 2014

    • snpr

      Public
      The sources of the openSNP website
      Ruby
      •46•0•0•0•Updated Apr 9, 2014Apr 9, 2014

    • Apollo

      Public
      Genome annotation editor, with a Java servlet backend and a Javascript client that runs in a web browser as a JBrowse plugin
      Java
      •
      Other
      •85•0•0•0•Updated Apr 8, 2014Apr 8, 2014

    • impress.js

      Public
      It's a presentation framework based on the power of CSS3 transforms and transitions in modern browsers and inspired by the idea behind prezi.com.
      JavaScript
      •6.7k•0•0•0•Updated Apr 5, 2014Apr 5, 2014

    • Snap.svg

      Public
      The JavaScript library for modern SVG graphics.
      JavaScript
      •
      Apache License 2.0
      •1.1k•0•0•0•Updated Mar 25, 2014Mar 25, 2014

    • bcbb

      Public
      Incubator for useful bioinformatics code, primarily in Python and R
      Python
      •242•0•0•0•Updated Mar 12, 2014Mar 12, 2014

    • A50-plot

      Public
      R
      •2•0•0•0•Updated Feb 6, 2014Feb 6, 2014

    • webmummer

      Public
      Web Browser Mummer Plot Viewer
      JavaScript
      •
      GNU General Public License v2.0
      •2•0•0•0•Updated Dec 15, 2013Dec 15, 2013

    • sql.js

      Public
      SQLite compiled to JavaScript through Emscripten
      C
      •1.1k•0•0•0•Updated Aug 9, 2013Aug 9, 2013

    • cufflinksviewer

      Public
      cuff links viewer
      Python
      •
      MIT License
      •1•0•0•0•Updated Jul 29, 2013Jul 29, 2013

    • qrqc

      Public
      Quick Read Quality Control
      R
      •7•0•0•0•Updated Apr 11, 2013Apr 11, 2013

    • SimSeq

      Public
      An illumina paired-end and mate-pair short read simulator. This project attempts to model as many of the quirks that exist in Illumina data as possible. Some of these quirks include the potential for chimeric reads, and non-biotinylated fragment pull down in mate-pair libraries . Additionally the program provides the ability to model both site a…
      C
      •
      Other
      •12•0•0•0•Updated Jun 15, 2012Jun 15, 2012