Preinstall needed packages on R Studio workbench #342
Labels
feature/rstudio
JIRA
jira issue exists for following github issue
kind/feature
New feature or request
JIRA: https://issues.redhat.com/browse/RHOAIENG-366
Why you need this feature:
If the bellow packages missing, the majority of the packages will fail installing, either directly or due to missing dependencies.
Describe the solution you'd like:
Rcpp has to be compiled, add in containefile RUN R -e ‘install.packages(“Rcpp”)’ to get the missing headerfile. OBS! This package has to be installed first, execute it on its own line. It is the C compiler for R. If this is missing, the majority of the packages will fail installing, either directly or due to missing dependencies.
Preinstall needed packages, add to containerfile or similar:
RUN dnf install -y libsodium-devel.x86_64 && dnf install -y libgit2-devel.x86_64 && dnf install -y libcurl-devel && dnf install -y cmake && dnf install -y flexiblas-*
Preinstall these packages to save data scientist time to install. Add this to containerfile:
RUN R -e ‘install.packages(c(“tidyverse”, “tidymodels”, “plumber”, “vetiver”, “devtools”))’
Anything else you would like to add:
Document: https://docs.google.com/document/d/1Hp0cg98FqptMxerB5jtbFAcvaRH2uZZgBjTLt5FojuE/edit#heading=h.i4eajclb9qkj
Acceptance criteria
Dev:
QA:
Example: here
Docs:
example: here
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