storage: Add assembly as QueryParam for CellBaseRestVariantAnnotator

Author: j-coll

opencga-storage/opencga-storage-core/src/main/java/org/opencb/opencga/storage/core/variant/annotation/annotators/CellBaseRestVariantAnnotator.java

@@ -40,6 +40,10 @@ public CellBaseRestVariantAnnotator(StorageConfiguration storageConfiguration, O
         cellBaseClient = new CellBaseClient(species, clientConfiguration);
         this.cellBaseClient = cellBaseClient;
 
+        // Add assembly as QueryOption!
+        // TODO: In newer cellbase version, this parameter is given in the CellBaseClient constructor
+        queryOptions.putIfNotEmpty("assembly", assembly);
+
         logger.info("Annotating with Cellbase REST. host '{}', version '{}', species '{}', assembly '{}'",
                 cellbaseRest, cellbaseVersion, species, assembly);
     }