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Adding Oct endpoints #366

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Nov 8, 2023
Merged

Adding Oct endpoints #366

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48 changes: 48 additions & 0 deletions endpointmanager/pkg/chplendpointquerier/canvasmedicalwebscraper.go
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Original file line number Diff line number Diff line change
@@ -0,0 +1,48 @@
package chplendpointquerier

import (
"strings"

"github.com/PuerkitoBio/goquery"
"github.com/onc-healthit/lantern-back-end/endpointmanager/pkg/helpers"
log "github.com/sirupsen/logrus"
)

func CanvasMedicalURLWebscraper(CHPLURL string, fileToWriteTo string) {

var lanternEntryList []LanternEntry
var endpointEntryList EndpointList

doc, err := helpers.ChromedpQueryEndpointList(CHPLURL, "")
if err != nil {
log.Fatal(err)
}

doc.Find("table").Each(func(index int, tablehtml *goquery.Selection) {
if index == 1 {
tablehtml.Find("tbody").Each(func(indextr int, rowhtml *goquery.Selection) {
rowhtml.Find("tr").Each(func(indextr int, rowbodyhtml *goquery.Selection) {
var entry LanternEntry
tableEntries := rowbodyhtml.Find("td")
if tableEntries.Length() > 0 {
organizationName := strings.TrimSpace(tableEntries.Eq(0).Text())
URL := strings.TrimSpace(tableEntries.Eq(1).Text())

entry.OrganizationName = organizationName
entry.URL = URL

lanternEntryList = append(lanternEntryList, entry)
}
})
})
}
})

endpointEntryList.Endpoints = lanternEntryList

err = WriteCHPLFile(endpointEntryList, fileToWriteTo)
if err != nil {
log.Fatal(err)
}

}
13 changes: 9 additions & 4 deletions endpointmanager/pkg/chplendpointquerier/chplendpointquerier.go
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Original file line number Diff line number Diff line change
Expand Up @@ -134,8 +134,9 @@ var healthInnovationURL = "https://revolutionehrdev.dynamicfhir.com/fhir/r4/endp
var mPNSoftwareURL = "https://mpnproxyfhirstore.blob.core.windows.net/serviceurl/ServiceBaseURLs.csv"
var NexusURL = "https://www.nexusclinical.net/nexusehr-fhirapi-base-urls.csv"
var MEDENTURL = "https://www.medent.com/std_api/ServiceBaseURL.csv"

//var tenzingURL = "https://tenzing.docs.apiary.io/#introduction/fhir-endpoints"
var CarepathsURL = "https://carepaths.com/uploads/org_endpoint_bundle.json"
var athenaClinicalsURL = "https://docs.athenahealth.com/api/guides/base-fhir-urls"
var canvasMedicalURL = "https://docs.canvasmedical.com/api/service-base-urls/"

func QueryCHPLEndpointList(chplURL string, fileToWriteTo string) {

Expand Down Expand Up @@ -273,6 +274,8 @@ func QueryCHPLEndpointList(chplURL string, fileToWriteTo string) {
CSVParser(chplURL, fileToWriteTo, "./ezdocs_fhir_base_urls.csv", 1, 0, true, 3, 1)
} else if URLsEqual(chplURL, netsmarttechnologiesURL) {
CSVParser(chplURL, fileToWriteTo, "./fhir_base_urls.csv", -1, 0, false, 1, 0)
} else if URLsEqual(chplURL, athenaClinicalsURL) {
CSVParser("https://fhir.athena.io/athena-fhir-urls/athenanet-fhir-base-urls.csv", fileToWriteTo, "./athenanet-fhir-base-urls.csv", 17136, 2, true, 3, 1)
} else if URLsEqual(chplURL, medicscloudURL) {
MedicsCloudWebscraper(chplURL, fileToWriteTo)
} else if URLsEqual(chplURL, advancedmdURL) {
Expand Down Expand Up @@ -371,14 +374,16 @@ func QueryCHPLEndpointList(chplURL string, fileToWriteTo string) {
BundleQuerierParser(chplURL, fileToWriteTo)
} else if URLsEqual(chplURL, healthInnovationURL) {
BundleQuerierParser(chplURL, fileToWriteTo)
} else if URLsEqual(chplURL, CarepathsURL) {
BundleQuerierParser(chplURL, fileToWriteTo)
} else if URLsEqual(chplURL, mPNSoftwareURL) {
CSVParser("https://mpnproxyfhirstore.blob.core.windows.net/serviceurl/ServiceBaseURLs.csv", fileToWriteTo, "./ServiceBaseURLs.csv", 1, 0, true, 3, 2)
} else if URLsEqual(chplURL, NexusURL) {
CSVParser("https://www.nexusclinical.net/nexusehr-fhirapi-base-urls.csv", fileToWriteTo, "./nexusehr-fhirapi-base-urls.csv", 1, 0, true, 2, 1)
} else if URLsEqual(chplURL, MEDENTURL) {
CSVParser(MEDENTURL, fileToWriteTo, "./ServiceBaseURL.csv", 1, 0, true, 1, 0)
// } else if URLsEqual(chplURL, tenzingURL) {
// TenzingURLWebscraper("https://tenzing.docs.apiary.io/#introduction/terms-and-conditions/fhir-endpoints", fileToWriteTo)
} else if URLsEqual(chplURL, canvasMedicalURL) {
CanvasMedicalURLWebscraper(chplURL, fileToWriteTo)
}
}

Expand Down
2 changes: 2 additions & 0 deletions endpointmanager/pkg/helpers/helpers.go
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Original file line number Diff line number Diff line change
Expand Up @@ -179,6 +179,8 @@ func QueryAndOpenCSV(csvURL string, csvFilePath string, header bool) (*csv.Reade

// read csv values using csv.Reader
csvReader := csv.NewReader(f)
csvReader.Comma = ',' // Set the delimiter (default is ',')
csvReader.LazyQuotes = true // Enable handling of lazy quotes

if header {
// Read first line to skip over headers
Expand Down
64 changes: 64 additions & 0 deletions resources/dev_resources/AthenaClinicals_EndpointSources.json
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@@ -0,0 +1,64 @@
{
"Endpoints": [
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "NC - Sollus Pediatrics",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "KY - Scott \u0026 Jonah Mds",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "First Physicians",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "TX - Trophy Club Pediatrics, PA",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "MA - The Sharewood Project",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "GA - Contemporary Women's Healthcare",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "WA - Dr. Stephen B. Hillis, MD",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "FL - Margarita M Vendrell MD",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "Boca Integrative Health",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "https://api.platform.athenahealth.com/fhir/r4",
"OrganizationName": "Center for Emotional Wellness at RPCA",
"NPIID": "",
"OrganizationZipCode": ""
}
]
}
10 changes: 10 additions & 0 deletions resources/dev_resources/CanvasMedical_EndpointSources.json
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@@ -0,0 +1,10 @@
{
"Endpoints": [
{
"URL": "https://fumage-modernfamilypractice.canvasmedical.com",
"OrganizationName": "modernfamilypractice",
"NPIID": "",
"OrganizationZipCode": ""
}
]
}
64 changes: 64 additions & 0 deletions resources/dev_resources/Carepaths_EHR_EndpointSources.json
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@@ -0,0 +1,64 @@
{
"Endpoints": [
{
"URL": "http://developer.carepaths.com/beauchene/api/",
"OrganizationName": "Beauchene Family Therapy LLC",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/qcounseling/api/",
"OrganizationName": "Q Counseling Services",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/1390898-152525/api/",
"OrganizationName": "Kristen O'Shea, PhD",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/salt/api/",
"OrganizationName": "Salt and Light Counseling",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/frcc/api/",
"OrganizationName": "Firmly Rooted Counseling \u0026 Consulting",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/rochford/api/",
"OrganizationName": "Lisa Rochford, PhD",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/pacificsky/api/",
"OrganizationName": "Pacific Sky Counseling",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/yelk/api/",
"OrganizationName": "Dawn L. Yelk, LCSW",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/scl/api/",
"OrganizationName": "Sharon Chatkupt Lee, Psy.D.",
"NPIID": "",
"OrganizationZipCode": ""
},
{
"URL": "http://developer.carepaths.com/1385102-145752/api/",
"OrganizationName": "Embrace Life Counseling",
"NPIID": "",
"OrganizationZipCode": ""
}
]
}
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