Update REST api to read daily cached file

onc-healthit · Sep 5, 2023 · c4285b1 · c4285b1
1 parent 0130fd3
commit c4285b1
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Showing 4 changed files with 19 additions and 7 deletions.
diff --git a/api/download/downloadsmodule.R b/api/download/downloadsmodule.R
@@ -13,7 +13,7 @@ get_endpoint_organizations <- function(db_connection) {
 get_endpoint_export_tbl <- function(db_tables) {
 
 endpoint_organization_tbl <- get_endpoint_organizations(db_connection)
-
+print(endpoint_organization_tbl)
 endpoint_export_tbl <- db_tables$endpoint_export %>%
   collect() %>%
   mutate(vendor_name = na_if(vendor_name, "")) %>%
@@ -28,6 +28,8 @@ endpoint_export_tbl <- db_tables$endpoint_export %>%
   mutate(endpoint_names = gsub("NULL", "", as.character(endpoint_names))) %>%
   mutate(endpoint_names = gsub("(\")", "", as.character(endpoint_names))) %>%
   mutate(format = gsub("(\"|\"|\\[|\\])", "", as.character(format)))
+  print("endpoint_export_tbl")
+  print(endpoint_export_tbl)
   endpoint_export_tbl
 }
 

diff --git a/api/download/restendpoints.R b/api/download/restendpoints.R
@@ -2,10 +2,16 @@ source("downloadsmodule.R")
 
 #* @apiTitle Download Daily FHIR Endpoints report
 #* Echo Download Daily FHIR Endpoints report
-#* @get /api/download
+#* @get /daily/download
 function(res) {
     res$setHeader("Content-Type", "text/csv")
     res$setHeader("Content-Disposition", "attachment; filename=fhir_endpoints.csv")
-    write.csv(get_fhir_endpoints_tbl(db_tables), file='fhir_endpoints.csv', row.names=FALSE)
-    include_file('fhir_endpoints.csv', res, content_type = "text/csv")
+    st <- format(Sys.time(), "%Y-%m-%d")
+    filename <- paste("fhir_endpoints_", st, ".csv", sep = "")
+    print(filename)
+    if (!file.exists(filename)) {
+        print("Not")
+        write.csv(get_fhir_endpoints_tbl(db_tables), file=filename, row.names=FALSE)
+    }
+    include_file(filename, res, content_type = "text/csv")
 }
diff --git a/docker-compose.override.yml b/docker-compose.override.yml
@@ -43,3 +43,6 @@ services:
     ports:
       - "3838:3838"
 
+  plumber:
+    ports:
+      - "8989:8989"
diff --git a/scripts/save_daily_csv_export.sh b/scripts/save_daily_csv_export.sh
@@ -14,14 +14,15 @@ mkdir -p $FILE_DIR
 
 EXPORTFILE="/etc/lantern/dailyexport/$FILE_NAME"
 echo $EXPORTFILE
-URL="http://127.0.0.1:8989/api/download"
+#URL="http://127.0.0.1:8989/api/download"
+URL="https://lantern.healthit.gov/api/daily/download"
 curl -o "$EXPORTFILE" "$URL"
 mv "$EXPORTFILE" "$FILE_DIR/$FILE_NAME"
 
 cd $FILE_DIR
 
 git pull
-git checkout daily_export
+git checkout main
 git add $FILE_NAME
 git commit -m "Adding daily export file ${FILE_NAME}"
-git push --set-upstream origin daily_export
+git push --set-upstream origin main