From ccdb536a91d37a245a939ae27693dc85a8278986 Mon Sep 17 00:00:00 2001 From: Anita Caron Date: Tue, 18 Jul 2023 18:01:41 +0100 Subject: [PATCH 1/3] update hra_subset component pipeline --- docs/odk-workflows/RepositoryFileStructure.md | 2 +- src/ontology/Makefile | 10 + src/ontology/components/hra_subset.owl | 337 +++++++++--------- src/ontology/uberon-odk.yaml | 1 + src/ontology/uberon.Makefile | 7 - 5 files changed, 182 insertions(+), 175 deletions(-) diff --git a/docs/odk-workflows/RepositoryFileStructure.md b/docs/odk-workflows/RepositoryFileStructure.md index 46c8a06e1f..4e0d60d3e8 100644 --- a/docs/odk-workflows/RepositoryFileStructure.md +++ b/docs/odk-workflows/RepositoryFileStructure.md @@ -41,5 +41,5 @@ These are the components in UBERON | -------- | --- | | mappings.owl | None | | in-subset.owl | None | -| hra_subset.owl | None | +| hra_subset.owl | https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl | | vasculature_class.owl | None | diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 4a755541d7..b7222420e8 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -395,6 +395,16 @@ $(COMPONENTSDIR)/%: | $(COMPONENTSDIR) +.PHONY: component-download-hra_subset.owl +component-download-hra_subset.owl: | $(TMPDIR) + if [ $(MIR) = true ] && [ $(COMP) = true ]; then $(ROBOT) merge -I https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl \ + annotate --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) -o $(TMPDIR)/$@.owl; fi + +$(COMPONENTSDIR)/hra_subset.owl: component-download-hra_subset.owl + if [ $(COMP) = true ] ; then if cmp -s $(TMPDIR)/component-download-hra_subset.owl.owl $@ ; then echo "Component identical."; else echo "Component is different, updating." && cp $(TMPDIR)/component-download-hra_subset.owl.owl $@; fi; fi + +.PRECIOUS: $(COMPONENTSDIR)/hra_subset.owl + # ---------------------------------------- # Mirroring upstream ontologies # ---------------------------------------- diff --git a/src/ontology/components/hra_subset.owl b/src/ontology/components/hra_subset.owl index 397996e3e2..2ec1b2c24d 100644 --- a/src/ontology/components/hra_subset.owl +++ b/src/ontology/components/hra_subset.owl @@ -1,6 +1,6 @@ - - + + + 2023-07-18 + @@ -1333,15 +1336,6 @@ - - - - - - - - - @@ -1351,24 +1345,6 @@ - - - - - - - - - - - - - - - - - - @@ -2359,6 +2335,15 @@ + + + + + + + + + @@ -4186,15 +4171,6 @@ - - - - - - - - - @@ -4276,6 +4252,15 @@ + + + + + + + + + @@ -5059,6 +5044,15 @@ + + + + + + + + + @@ -5149,15 +5143,6 @@ - - - - - - - - - @@ -5437,6 +5422,15 @@ + + + + + + + + + @@ -6193,15 +6187,6 @@ - - - - - - - - - @@ -6463,6 +6448,15 @@ + + + + + + + + + @@ -6571,6 +6565,15 @@ + + + + + + + + + @@ -6715,6 +6718,15 @@ + + + + + + + + + @@ -6994,15 +7006,6 @@ - - - - - - - - - @@ -7066,6 +7069,15 @@ + + + + + + + + + @@ -7759,15 +7771,6 @@ - - - - - - - - - @@ -8596,15 +8599,6 @@ - - - - - - - - - @@ -9073,6 +9067,15 @@ + + + + + + + + + @@ -9163,15 +9166,6 @@ - - - - - - - - - @@ -9559,24 +9553,6 @@ - - - - - - - - - - - - - - - - - - @@ -9631,6 +9607,15 @@ + + + + + + + + + @@ -9883,6 +9868,15 @@ + + + + + + + + + @@ -9919,6 +9913,15 @@ + + + + + + + + + @@ -10108,15 +10111,6 @@ - - - - - - - - - @@ -10135,15 +10129,6 @@ - - - - - - - - - @@ -10567,15 +10552,6 @@ - - - - - - - - - @@ -10999,24 +10975,6 @@ - - - - - - - - - - - - - - - - - - @@ -11395,9 +11353,9 @@ - + - + @@ -12547,15 +12505,6 @@ - - - - - - - - - @@ -12664,6 +12613,15 @@ + + + + + + + + + @@ -12889,12 +12847,57 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/src/ontology/uberon-odk.yaml b/src/ontology/uberon-odk.yaml index 3e399e3adb..6c9b4cd3d2 100644 --- a/src/ontology/uberon-odk.yaml +++ b/src/ontology/uberon-odk.yaml @@ -120,4 +120,5 @@ components: - filename: mappings.owl - filename: in-subset.owl - filename: hra_subset.owl + source: https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl - filename: vasculature_class.owl \ No newline at end of file diff --git a/src/ontology/uberon.Makefile b/src/ontology/uberon.Makefile index cf0d2e1648..bafa6779f6 100644 --- a/src/ontology/uberon.Makefile +++ b/src/ontology/uberon.Makefile @@ -1788,13 +1788,6 @@ $(COMPONENTSDIR)/in-subset.owl: $(SRC) $(TEMPLATEDIR)/in-subset.template.tsv $(COMPONENTSDIR)/vasculature_class.owl: $(TEMPLATEDIR)/vasculature_class.owl $(ROBOT) merge -i $< annotate --ontology-iri $(ONTBASE)/$@ --output $@ -HRA_SUBSET_URL="https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl" -$(TMPDIR)/hra_subset.owl: - wget $(HRA_SUBSET_URL) -O $@ - -$(COMPONENTSDIR)/hra_subset.owl: $(TMPDIR)/hra_subset.owl - $(ROBOT) merge -i $< annotate --ontology-iri $(ONTBASE)/$@ --output $@ - # ---------------------------------------- # DEAD SIMPLE DESIGN PATTERNS # ---------------------------------------- From cb6f0196263b2e6147066ea1bcc7d6b26f2907d4 Mon Sep 17 00:00:00 2001 From: Anita Caron Date: Fri, 22 Mar 2024 11:22:04 +0000 Subject: [PATCH 2/3] config hra components in odk yaml --- docs/odk-workflows/RepositoryFileStructure.md | 2 +- src/ontology/Makefile | 31 +++++++++++++++++-- src/ontology/uberon-odk.yaml | 7 ++++- src/ontology/uberon.Makefile | 20 ------------ 4 files changed, 35 insertions(+), 25 deletions(-) diff --git a/docs/odk-workflows/RepositoryFileStructure.md b/docs/odk-workflows/RepositoryFileStructure.md index 7f91e13fd7..b495282915 100644 --- a/docs/odk-workflows/RepositoryFileStructure.md +++ b/docs/odk-workflows/RepositoryFileStructure.md @@ -47,4 +47,4 @@ These are the components in UBERON | in-subset.owl | None | | hra_subset.owl | https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl | | vasculature_class.owl | None | -| hra_depiction_3d_images.owl | None | +| hra_depiction_3d_images.owl | https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/hra_uberon_3d_images.owl | diff --git a/src/ontology/Makefile b/src/ontology/Makefile index 2496ccd127..9925fd23a3 100644 --- a/src/ontology/Makefile +++ b/src/ontology/Makefile @@ -10,7 +10,7 @@ # More information: https://github.com/INCATools/ontology-development-kit/ # Fingerprint of the configuration file when this Makefile was last generated -CONFIG_HASH= c8fa86ab8f984cb6c9ea20468b4ae4ff2e446501d9c361b8a3993841a38177eb +CONFIG_HASH= 5b43938035885714e882948608e09a43483b1e19dbe9e3bf1559f6869da6ea6a # ---------------------------------------- @@ -467,10 +467,35 @@ component-download-hra_subset.owl: | $(TMPDIR) if [ $(MIR) = true ] && [ $(COMP) = true ]; then $(ROBOT) merge -I https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl \ annotate --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) -o $(TMPDIR)/$@.owl; fi -$(COMPONENTSDIR)/hra_subset.owl: component-download-hra_subset.owl - if [ $(COMP) = true ] ; then if cmp -s $(TMPDIR)/component-download-hra_subset.owl.owl $@ ; then echo "Component identical."; else echo "Component is different, updating." && cp $(TMPDIR)/component-download-hra_subset.owl.owl $@; fi; fi +$(COMPONENTSDIR)/hra_subset.owl: component-download-hra_subset.owl + if [ $(COMP) = true ]; then if cmp -s $(TMPDIR)/component-download-hra_subset.owl.owl $(TMPDIR)/component-download-hra_subset.owl.tmp.owl ; then echo "Component identical."; \ + else echo "Component is different, updating." &&\ + cp $(TMPDIR)/component-download-hra_subset.owl.owl $(TMPDIR)/component-download-hra_subset.owl.tmp.owl &&\ + $(ROBOT) annotate -i $(TMPDIR)/component-download-hra_subset.owl.owl --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) -o $@; fi; fi .PRECIOUS: $(COMPONENTSDIR)/hra_subset.owl + + +$(COMPONENTSDIR)/vasculature_class.owl: $(TEMPLATEDIR)/vasculature_class.tsv + if [ $(COMP) = true ] ; then $(ROBOT) template --input imports/merged_import.owl \ + $(patsubst %, --template %, $^) \ + $(ANNOTATE_CONVERT_FILE); fi + +.PRECIOUS: $(COMPONENTSDIR)/vasculature_class.owl + + +.PHONY: component-download-hra_depiction_3d_images.owl +component-download-hra_depiction_3d_images.owl: | $(TMPDIR) + if [ $(MIR) = true ] && [ $(COMP) = true ]; then $(ROBOT) merge -I https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/hra_uberon_3d_images.owl \ + annotate --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) -o $(TMPDIR)/$@.owl; fi + +$(COMPONENTSDIR)/hra_depiction_3d_images.owl: component-download-hra_depiction_3d_images.owl + if [ $(COMP) = true ]; then if cmp -s $(TMPDIR)/component-download-hra_depiction_3d_images.owl.owl $(TMPDIR)/component-download-hra_depiction_3d_images.owl.tmp.owl ; then echo "Component identical."; \ + else echo "Component is different, updating." &&\ + cp $(TMPDIR)/component-download-hra_depiction_3d_images.owl.owl $(TMPDIR)/component-download-hra_depiction_3d_images.owl.tmp.owl &&\ + $(ROBOT) annotate -i $(TMPDIR)/component-download-hra_depiction_3d_images.owl.owl --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) -o $@; fi; fi + +.PRECIOUS: $(COMPONENTSDIR)/hra_depiction_3d_images.owl # ---------------------------------------- # Mirroring upstream ontologies # ---------------------------------------- diff --git a/src/ontology/uberon-odk.yaml b/src/ontology/uberon-odk.yaml index c1d3d5e838..117578c3ad 100644 --- a/src/ontology/uberon-odk.yaml +++ b/src/ontology/uberon-odk.yaml @@ -131,4 +131,9 @@ components: - filename: hra_subset.owl source: https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl - filename: vasculature_class.owl - - filename: hra_depiction_3d_images.owl \ No newline at end of file + use_template: True + template_options: --input imports/merged_import.owl + templates: + - vasculature_class.tsv + - filename: hra_depiction_3d_images.owl + source: https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/hra_uberon_3d_images.owl \ No newline at end of file diff --git a/src/ontology/uberon.Makefile b/src/ontology/uberon.Makefile index 74febbab54..aac110c3b4 100644 --- a/src/ontology/uberon.Makefile +++ b/src/ontology/uberon.Makefile @@ -1383,26 +1383,6 @@ $(COMPONENTSDIR)/in-subset.owl: $(SRC) $(TEMPLATEDIR)/in-subset.template.tsv annotate --ontology-iri $(ONTBASE)/$@ \ --output $(COMPONENTSDIR)/in-subset.owl -$(COMPONENTSDIR)/vasculature_class.owl: $(TEMPLATEDIR)/vasculature_class.owl - $(ROBOT) merge -i $< annotate --ontology-iri $(ONTBASE)/$@ --output $@ - -HRA_SUBSET_URL="https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/UB_ASCTB_subset.owl" -$(TMPDIR)/hra_subset.owl: - wget $(HRA_SUBSET_URL) -O $@ - -ifeq ($(strip $(MIR)),true) -$(COMPONENTSDIR)/hra_subset.owl: $(TMPDIR)/hra_subset.owl - $(ROBOT) merge -i $< annotate --ontology-iri $(ONTBASE)/$@ --output $@ -endif - -3D_IMAGES_COMP_URL="https://raw.githubusercontent.com/hubmapconsortium/ccf-validation-tools/master/owl/hra_uberon_3d_images.owl" -$(TMPDIR)/hra_depiction_3d_images.owl: - wget $(3D_IMAGES_COMP_URL) -O $@ - -$(COMPONENTSDIR)/hra_depiction_3d_images.owl: $(TMPDIR)/hra_depiction_3d_images.owl - $(ROBOT) merge -i $< annotate --ontology-iri $(ONTBASE)/$@ --output $@ - - # The mappings.owl component contains cross-references to foreign # ontologies that provide their own mappings as a SSSOM set. This # component ensures those mappings are visible to Uberon editors and From 6210c0da7eabf793f55702033fa681f82c7703d2 Mon Sep 17 00:00:00 2001 From: Anita Caron Date: Fri, 22 Mar 2024 11:22:16 +0000 Subject: [PATCH 3/3] update components --- .../components/hra_depiction_3d_images.owl | 1206 ++++---- src/ontology/components/hra_subset.owl | 761 ++++- src/ontology/components/vasculature_class.owl | 2742 ++++------------- src/templates/vasculature_class.owl | 2325 -------------- src/templates/vasculature_class.tsv | 2 +- 5 files changed, 1966 insertions(+), 5070 deletions(-) delete mode 100644 src/templates/vasculature_class.owl diff --git a/src/ontology/components/hra_depiction_3d_images.owl b/src/ontology/components/hra_depiction_3d_images.owl index 7e96ecc315..5d24c91cb6 100644 --- a/src/ontology/components/hra_depiction_3d_images.owl +++ b/src/ontology/components/hra_depiction_3d_images.owl @@ -7,7 +7,10 @@ xmlns:xsd="http://www.w3.org/2001/XMLSchema#" xmlns:foaf="http://xmlns.com/foaf/0.1/" xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> - + + + 2024-03-22 + @@ -37,1178 +40,1187 @@ --> - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/uterus-female/v1.1/assets/VH_F_Uterus.glb + + + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-left/v1.0/assets/NIH_F_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-right/v1.0/assets/NIH_F_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-left/v1.0/assets/NIH_M_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-right/v1.0/assets/NIH_M_Lymph_Node_Right.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/SBU_F_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.2/assets/SBU_F_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.2/assets/SBU_M_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Placenta.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/placenta-full-term-female/v1.0/assets/VH_F_Placenta.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_R.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Kidney_R.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-female-left/v1.2/assets/VH_F_Kidney_L.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-female-right/v1.2/assets/VH_F_Kidney_R.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-male-left/v1.2/assets/VH_M_Kidney_L.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/kidney-male-right/v1.2/assets/VH_M_Kidney_R.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.2/assets/SBU_F_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.2/assets/SBU_M_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.2/assets/VH_F_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.2/assets/VH_M_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/uterus-female/v1.1/assets/VH_F_Uterus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.0/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_F_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/SBU_M_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-female/v1.2/assets/SBU_F_Intestine_Large.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/large-intestine-male/v1.2/assets/SBU_M_Intestine_Large.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Pancreas.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Pancreas.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-female/v1.2/assets/3d-vh-f-pancreas.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/pancreas-male/v1.2/assets/3d-vh-m-pancreas.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb + + + 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https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.1/assets/VH_F_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-male/v1.1/assets/VH_M_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.1/assets/VH_F_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-male/v1.1/assets/VH_M_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.1/assets/VH_F_Small_Intestine.glb + 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https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.2/assets/VH_F_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.2/assets/VH_M_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.2/assets/VH_F_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.2/assets/VH_M_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-female/v1.2/assets/VH_F_Heart.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/heart-male/v1.2/assets/VH_M_Heart.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - 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https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-female/v1.0/assets/3d-vh-f-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-male/v1.0/assets/3d-vh-m-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-female/v1.0/assets/3d-vh-f-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-male/v1.0/assets/3d-vh-m-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-female/v1.0/assets/3d-vh-f-main-bronchus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/main-bronchus-male/v1.0/assets/3d-vh-m-main-bronchus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Kidney_L.glb - 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https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Spinal_Cord.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Spinal_Cord.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/spinal-cord-female/v1.0/assets/VH_F_Spinal_Cord.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/spinal-cord-male/v1.0/assets/VH_M_Spinal_Cord.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + 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https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + 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https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-right/v1.0/assets/NIH_F_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.2/assets/NIH_F_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-left/v1.0/assets/NIH_M_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-right/v1.0/assets/NIH_M_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.2/assets/NIH_M_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-left/v1.0/assets/NIH_F_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-right/v1.0/assets/NIH_F_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.2/assets/NIH_F_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-left/v1.0/assets/NIH_M_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-right/v1.0/assets/NIH_M_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.2/assets/NIH_M_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-left/v1.0/assets/NIH_F_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-right/v1.0/assets/NIH_F_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.2/assets/NIH_F_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-left/v1.0/assets/NIH_M_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-right/v1.0/assets/NIH_M_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.2/assets/NIH_M_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-l.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-eye-r.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-l.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-eye-r.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/eye-female-left/v1.2/assets/3d-vh-f-eye-l.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/eye-female-right/v1.2/assets/3d-vh-f-eye-r.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/eye-male-left/v1.2/assets/3d-vh-m-eye-l.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/eye-male-right/v1.2/assets/3d-vh-m-eye-r.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_F_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/NIH_M_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-left/v1.0/assets/NIH_F_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female-right/v1.0/assets/NIH_F_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-female/v1.2/assets/NIH_F_Lymph_Node.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-left/v1.0/assets/NIH_M_Lymph_Node_Left.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male-right/v1.0/assets/NIH_M_Lymph_Node_Right.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lymph-node-male/v1.2/assets/NIH_M_Lymph_Node.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-l.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-r.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/mammary-gland-female-left/v1.0/assets/3d-vh-f-mammary-gland-l.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/mammary-gland-female-right/v1.0/assets/3d-vh-f-mammary-gland-r.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-f-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.4/3d-vh-m-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-female/v1.3/assets/3d-vh-f-lung.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/lung-male/v1.3/assets/3d-vh-m-lung.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-female/v1.1/assets/VH_F_Small_Intestine.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/small-intestine-male/v1.1/assets/VH_M_Small_Intestine.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/uterus-female/v1.1/assets/VH_F_Uterus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Uterus.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/uterus-female/v1.1/assets/VH_F_Uterus.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-l.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/mammary-gland-female-left/v1.0/assets/3d-vh-f-mammary-gland-l.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.3/3d-vh-f-mammary-gland-r.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/mammary-gland-female-right/v1.0/assets/3d-vh-f-mammary-gland-r.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb + + + https://cdn.humanatlas.io/digital-objects/ref-organ/mammary-gland-female-left/v1.0/assets/3d-vh-f-mammary-gland-l.glb + 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https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-female/v1.1/assets/VH_F_Liver.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/liver-male/v1.1/assets/VH_M_Liver.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_F_Brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/Allen_M_Brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-female/v1.3/assets/3d-vh-f-allen-brain.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/brain-male/v1.3/assets/3d-vh-m-allen-brain.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Blood_Vasculature.glb - - - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Knee_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_F_Knee_R.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Knee_L.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Knee_R.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-female/v1.2/assets/VH_F_Blood_Vasculature.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/blood-vasculature-male/v1.2/assets/VH_M_Blood_Vasculature.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb - https://ccf-ontology.hubmapconsortium.org/objects/v1.2/VH_M_Prostate.glb + https://cdn.humanatlas.io/digital-objects/ref-organ/prostate-male/v1.1/assets/VH_M_Prostate.glb diff --git a/src/ontology/components/hra_subset.owl b/src/ontology/components/hra_subset.owl index 68a7b04f20..0d37c42f7c 100644 --- a/src/ontology/components/hra_subset.owl +++ b/src/ontology/components/hra_subset.owl @@ -1,6 +1,6 @@ - - - - 2023-07-18 + + + 2024-03-22 @@ -166,6 +166,15 @@ + + + + + + + + + @@ -526,6 +535,15 @@ + + + + + + + + + @@ -607,6 +625,15 @@ + + + + + + + + + @@ -679,6 +706,15 @@ + + + + + + + + + @@ -1462,6 +1498,15 @@ + + + + + + + + + @@ -1471,6 +1516,24 @@ + + + + + + + + + + + + + + + + + + @@ -2479,15 +2542,6 @@ - - - - - - - - - @@ -3901,6 +3955,15 @@ + + + + + + + + + @@ -4126,6 +4189,15 @@ + + + + + + + + + @@ -4531,6 +4603,15 @@ + + + + + + + + + @@ -4675,6 +4756,24 @@ + + + + + + + + + + + + + + + + + + @@ -4729,6 +4828,15 @@ + + + + + + + + + @@ -5332,6 +5440,15 @@ + + + + + + + + + @@ -5359,6 +5476,15 @@ + + + + + + + + + @@ -5638,9 +5764,9 @@ - + - + @@ -5962,15 +6088,6 @@ - - - - - - - - - @@ -7357,6 +7474,33 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -7375,6 +7519,15 @@ + + + + + + + + + @@ -7591,15 +7744,6 @@ - - - - - - - - - @@ -7816,6 +7960,15 @@ + + + + + + + + + @@ -8932,6 +9085,15 @@ + + + + + + + + + @@ -8986,6 +9148,15 @@ + + + + + + + + + @@ -9112,6 +9283,15 @@ + + + + + + + + + @@ -9139,6 +9319,15 @@ + + + + + + + + + @@ -9814,6 +10003,15 @@ + + + + + + + + + @@ -10048,6 +10246,24 @@ + + + + + + + + + + + + + + + + + + @@ -10282,15 +10498,6 @@ - - - - - - - - - @@ -10822,6 +11029,15 @@ + + + + + + + + + @@ -10912,6 +11128,15 @@ + + + + + + + + + @@ -10984,81 +11209,126 @@ - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -11182,15 +11452,6 @@ - - - - - - - - - @@ -11605,6 +11866,15 @@ + + + + + + + + + @@ -11668,6 +11938,15 @@ + + + + + + + + + @@ -11695,6 +11974,15 @@ + + + + + + + + + @@ -11785,6 +12073,51 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -12955,6 +13288,15 @@ + + + + + + + + + @@ -13009,6 +13351,33 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -13099,6 +13468,15 @@ + + + + + + + + + @@ -13108,6 +13486,51 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -13243,6 +13666,33 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -13486,6 +13936,15 @@ + + + + + + + + + @@ -13945,6 +14404,33 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -14008,6 +14494,15 @@ + + + + + + + + + @@ -14062,18 +14557,18 @@ - + - + - + - + @@ -14233,6 +14728,15 @@ + + + + + + + + + @@ -14242,6 +14746,15 @@ + + + + + + + + + @@ -14410,8 +14923,108 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/src/ontology/components/vasculature_class.owl b/src/ontology/components/vasculature_class.owl index 416eb2e5b4..06c8da0fbf 100644 --- a/src/ontology/components/vasculature_class.owl +++ b/src/ontology/components/vasculature_class.owl @@ -1,2325 +1,921 @@ - - - - +Prefix(:=) +Prefix(owl:=) +Prefix(rdf:=) +Prefix(xml:=) +Prefix(xsd:=) +Prefix(rdfs:=) + + +Ontology( + +Annotation(owl:versionInfo "2024-03-22") + +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(ObjectProperty()) +Declaration(AnnotationProperty()) + + + +############################ +# Classes +############################ + +# Class: () + +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - - - - - - - - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - +# Class: () - - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) +# Class: () - +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) - - - - - - - - - - +# Class: () +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) 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+AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: () + +AnnotationAssertion( ) +SubClassOf( ObjectSomeValuesFrom( )) + + +) \ No newline at end of file diff --git a/src/templates/vasculature_class.owl b/src/templates/vasculature_class.owl deleted file mode 100644 index 3fb380fedb..0000000000 --- a/src/templates/vasculature_class.owl +++ /dev/null @@ -1,2325 +0,0 @@ - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - diff --git a/src/templates/vasculature_class.tsv b/src/templates/vasculature_class.tsv index 45e61a68fc..583eef834f 100644 --- a/src/templates/vasculature_class.tsv +++ b/src/templates/vasculature_class.tsv @@ -1,5 +1,5 @@ SUBJECT OBJECT in_subset -ID SC 'connected_to' some % AI in_subset +ID SC 'connected to' some % AI in_subset UBERON:0000443 UBERON:0001142 human_reference_atlas UBERON:0000947 UBERON:0002084 human_reference_atlas UBERON:0000985 UBERON:0001587 human_reference_atlas