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oio:id not applied consistently #3237

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shawntanzk opened this issue Mar 1, 2024 · 4 comments
Open

oio:id not applied consistently #3237

shawntanzk opened this issue Mar 1, 2024 · 4 comments

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@shawntanzk
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https://api.triplydb.com/s/UzfGT0r5T
The above sparql query shows a list of terms that do not have oio:id on them
Looks like the same 52 terms as #3002

@shawntanzk shawntanzk added the tech label Mar 1, 2024
@balhoff
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balhoff commented Mar 1, 2024

oio:id is inserted automatically by the OWL API OBO parser. I thought about dropping this in my open PR, but didn't want to go changing behavior arbitrarily.

@dosumis
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dosumis commented Apr 15, 2024

  • @shawntanzk - It should definitely be treated as deprecated. It should never be relied on as can be derived. I would love for it to be removed from the OWL-API OBO parser. Anyone who relies on it should have to fix their pipeline.

@shawntanzk
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I've already removed it from all our pipelines, just thought I'd also report it back to source too :)

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This issue has not seen any activity in the past 6 months; it will be closed automatically one year from now if no action is taken.

@github-actions github-actions bot added the Stale label Oct 13, 2024
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