You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
In DESeqDataSet(rse, design, ignoreRank = TRUE) :
some variables in design formula are characters, converting to factors
Error in fn(par, ...) : reached CPU time limit
Calls: lapply ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
Execution halted
Good afternoon! I put a small sample (34 samples) into processing - everything went well, without errors. I set a sample for 130 samples, constantly crashes at this place with such an error. Tell me, what could be the problem? I have increased the memory and time limits. Thank you.
Command used and terminal output
In DESeqDataSet(rse, design, ignoreRank = TRUE) :
some variables in design formula are characters, converting to factors
Error in fn(par, ...) : reached CPU time limit
Calls: lapply ... tryCatch -> tryCatchList -> tryCatchOne ->
Execution halted
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered:
Description of the bug
Good afternoon! I put a small sample (34 samples) into processing - everything went well, without errors. I set a sample for 130 samples, constantly crashes at this place with such an error. Tell me, what could be the problem? I have increased the memory and time limits. Thank you.
Command used and terminal output
In DESeqDataSet(rse, design, ignoreRank = TRUE) :
some variables in design formula are characters, converting to factors
Error in fn(par, ...) : reached CPU time limit
Calls: lapply ... tryCatch -> tryCatchList -> tryCatchOne ->
Execution halted
Relevant files
No response
System information
No response
The text was updated successfully, but these errors were encountered: