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[ci skip] Merge PR 34684
Merge PR bioconda#34684, commits were: * Fix build * Merge branch 'bioconda:master' into master * Merge branch 'bioconda:master' into master * Merge branch 'bioconda:master' into master * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge branch 'master' of https://github.com/bioconda/bioconda-recipes * Merge pull request #1 from bioconda/master Update Fork
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#!/bin/bash
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unzip $SRC_DIR/$PKG_VERSION
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PREFIX=$(echo "${PREFIX}" | tr '\\' '/')
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DOTNET_ROOT="${PREFIX}/lib/dotnet"
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TOOL_ROOT=$DOTNET_ROOT/tools/LabelFreeProteinQuantification
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mkdir -p $PREFIX/bin $TOOL_ROOT
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cp -r $SRC_DIR/tools/net5.0/any/* $TOOL_ROOT
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cp "$RECIPE_DIR/proteomiqon-labelfreeproteinquantification.sh" "$PREFIX/bin/proteomiqon-labelfreeproteinquantification"
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chmod +x "$PREFIX/bin/proteomiqon-labelfreeproteinquantification"

recipes/proteomiqon-labelfreeproteinquantification/meta.yaml

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build:
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noarch: generic
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number: 0
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script:
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- dotnet tool install --add-source $SRC_DIR --tool-path $PREFIX/bin --version {{ version }} ProteomIQon.LabelFreeProteinQuantification
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number: 1
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requirements:
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host:
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- dotnet-sdk
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- unzip
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run:
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- dotnet-runtime
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- dotnet-runtime =5.0
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- openssl =1.1
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test:
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commands:
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modification are skipped, the protein aggregation is performed on previously unaggregated peptides, where a peptidesequence can occur with different charge
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states and modifications.
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dev_url: https://github.com/CSBiology/ProteomIQon
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doc_url: https://csbiology.github.io/ProteomIQon/tools/LabelFreeProteinQuantification.html
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doc_url: https://csbiology.github.io/ProteomIQon/tools/LabelFreeProteinQuantification.html
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#!/usr/bin/env bash
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dotnet $CONDA_PREFIX/lib/dotnet/tools/LabelFreeProteinQuantification/ProteomIQon.LabelFreeProteinQuantification.dll "$@"

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