diff --git a/phylogenetic/rules/construct_phylogeny.smk b/phylogenetic/rules/construct_phylogeny.smk index 60da9a2..aa83f97 100644 --- a/phylogenetic/rules/construct_phylogeny.smk +++ b/phylogenetic/rules/construct_phylogeny.smk @@ -35,7 +35,6 @@ rule tree: augur tree \ --alignment {input.alignment} \ --output {output.tree} \ - --method raxml \ --nthreads {threads:q} 2>&1 | tee {log} """