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ingest-to-phylogenetic: Update cache s3_urls
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This workflow was originally copied from lassa which included
the `all` prefix. Removing the prefix to match the WNV S3 files so
that the cache can work as expected and trigger the phylo workflow.
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joverlee521 committed Oct 10, 2024
1 parent 291d832 commit 3f3fcb9
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions .github/workflows/ingest-to-phylogenetic.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -65,8 +65,8 @@ jobs:
AWS_DEFAULT_REGION: ${{ vars.AWS_DEFAULT_REGION }}
run: |
s3_urls=(
"s3://nextstrain-data/files/workflows/WNV/all/metadata.tsv.zst"
"s3://nextstrain-data/files/workflows/WNV/all/sequences.fasta.zst"
"s3://nextstrain-data/files/workflows/WNV/metadata.tsv.zst"
"s3://nextstrain-data/files/workflows/WNV/sequences.fasta.zst"
)
# Code below is modified from ingest/upload-to-s3
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