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[Microarray Affymetrix] Processed data protocol #98

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cyouh95 opened this issue Jun 7, 2024 · 1 comment
Open

[Microarray Affymetrix] Processed data protocol #98

cyouh95 opened this issue Jun 7, 2024 · 1 comment

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@cyouh95
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cyouh95 commented Jun 7, 2024

Track updates to generate_protocol.sh for Affymetrix pipeline.
@cyouh95
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cyouh95 commented Jun 7, 2024

List of supported organisms needs to be updated (e.g., "Caenorhabditis elegans"):

GeneLab_Data_Processing/Microarray/Affymetrix/Workflow_Documentation/NF_MAAffymetrix/workflow_code/modules/POST_PROCESSING/GENERATE_PROTOCOL/resources/usr/bin/generate_protocol.sh

Lines 31 to 32 in 90d6bb5

# List of organisms
organism_list=("Mus musculus" "Homo sapiens" "Rattus norvegicus" "Drosophila melanogaster" "Danio rerio")

cyouh95 added a commit to cyouh95/GeneLab_Data_Processing that referenced this issue Aug 30, 2024
@cyouh95
NF_MAAffymetrix: nasa#98 auto-populate workflow version in protocol
afc28c5
cyouh95 added a commit to cyouh95/GeneLab_Data_Processing that referenced this issue Aug 30, 2024
@cyouh95
NF_MAAffymetrix: nasa#98 update supported organisms in protocol
99060fa
@cyouh95 cyouh95 mentioned this issue Aug 31, 2024
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