diff --git a/src/agents/Agent.ts b/src/agents/Agent.ts
index 1c989eb..3da6bc4 100644
--- a/src/agents/Agent.ts
+++ b/src/agents/Agent.ts
@@ -172,7 +172,7 @@ export default abstract class Agent {
       if (input.command === command) {
         const response = callback();
         if (response) {
-          context.onProgress({ type: 'content', content: response.reply.content });
+          context.onProgress({ type: 'markdown', content: response.reply.content });
           return response;
         }
       }
diff --git a/src/agents/AgentContext.ts b/src/agents/AgentContext.ts
index 1da1d2f..9023238 100644
--- a/src/agents/AgentContext.ts
+++ b/src/agents/AgentContext.ts
@@ -45,9 +45,15 @@ export type ProgressData =
       range?: { start: { line: number; character: number }; end: { line: number; character: number } };
     }
   | {
+      /** Offer a button for the user to execute a command */
       type: 'button';
       command: { title: string; command: string; tooltip?: string; arguments?: any[] };
     }
+  | {
+      /** Automatically execute a command */
+      type: 'command';
+      command: { title: string; command: string; arguments?: any[] };
+    }
   | {
       /** Represents a tree, such as a file and directory structure, rendered in the chat response */
       type: 'fileTree';
diff --git a/src/agents/adapters/AgentProtocolClient.ts b/src/agents/adapters/AgentProtocolClient.ts
index 9ece17c..fcf06d2 100644
--- a/src/agents/adapters/AgentProtocolClient.ts
+++ b/src/agents/adapters/AgentProtocolClient.ts
@@ -23,7 +23,7 @@ export default class AgentProtocolClient extends Agent {
   override async receiveMessage(input: AgentInputMessage, context: AgentContext): Promise<AgentResponse> {
     const promisedStep = this.sendToRemoteAgent(input);
 
-    context.onProgress({ type: 'content', content: `Sending to remote agent at ${this.hostUrl}...\n\n` });
+    context.onProgress({ type: 'markdown', content: `Sending to remote agent at ${this.hostUrl}...\n\n` });
 
     const [step, content] = await promisedStep;
 
@@ -31,14 +31,14 @@ export default class AgentProtocolClient extends Agent {
       this.taskId = undefined;
     }
 
-    context.onProgress({ type: 'content', content: content + '\n\n' });
+    context.onProgress({ type: 'markdown', content: content + '\n\n' });
 
     const { command } = step.additional_output || {};
     if (command) {
       // TODO: ask_user(question: string)
       const toolResult = await ToolManager.executeTool(command.name, context, command.args);
       context.onProgress({
-        type: 'content',
+        type: 'markdown',
         content: `Executed tool: ${command.name}(${command.args}) with result: ${toolResult}`,
       });
     }
diff --git a/src/agents/adapters/CliClient.ts b/src/agents/adapters/CliClient.ts
index 66464d5..7eb290b 100644
--- a/src/agents/adapters/CliClient.ts
+++ b/src/agents/adapters/CliClient.ts
@@ -95,7 +95,7 @@ export class CliClient {
     logger.info(`Monitoring process ${process.pid}`);
     // Open the markdown box
     if (this.wrapOutput) {
-      context.onProgress({ type: 'content', content: this.wrapOutput + '\n' });
+      context.onProgress({ type: 'markdown', content: this.wrapOutput + '\n' });
     }
 
     return new Promise((resolve, reject) => {
@@ -110,7 +110,7 @@ export class CliClient {
 
         try {
           stdout += chunk;
-          context.onProgress({ type: 'content', content: chunk });
+          context.onProgress({ type: 'markdown', content: chunk });
         } catch (err) {
           logger.error('Error formatting output:', err);
         }
@@ -121,7 +121,7 @@ export class CliClient {
           logger.info('presumably that is the end?');
 
           if (this.wrapOutput) {
-            context.onProgress({ type: 'content', content: `\n${this.wrapOutput}\n` });
+            context.onProgress({ type: 'markdown', content: `\n${this.wrapOutput}\n` });
           }
 
           removeListeners();
@@ -134,7 +134,7 @@ export class CliClient {
           stderr += data.toString();
 
           const content = data.toString();
-          context.onProgress({ type: 'content', content });
+          context.onProgress({ type: 'markdown', content });
         } catch (err) {
           logger.error('Error formatting error:', err);
         }
diff --git a/src/llm/openai/openAiChatRequest.ts b/src/llm/openai/openAiChatRequest.ts
index a5a7968..59f3913 100644
--- a/src/llm/openai/openAiChatRequest.ts
+++ b/src/llm/openai/openAiChatRequest.ts
@@ -98,7 +98,7 @@ export const openAiChatRequest = async (
       const content = chunk.choices[0].delta.content;
       if (content) {
         buffer += content;
-        onProgress({ type: 'content', content });
+        onProgress({ type: 'markdown', content });
       }
 
       // TODO: cancellation
diff --git a/src/tools/impl/execute_python_code.ts b/src/tools/impl/execute_python_code.ts
index c1cc571..9e10125 100644
--- a/src/tools/impl/execute_python_code.ts
+++ b/src/tools/impl/execute_python_code.ts
@@ -22,11 +22,11 @@ const execute_python_code = async (context: ToolContext, code: string) => {
     const result = await runPythonInDocker(context, ['-c', `"${code}"`]);
     content = 'Executed Python code: \n```' + result + '\n```';
 
-    context.onProgress({ type: 'content', content });
+    context.onProgress({ type: 'markdown', content });
   } catch (err) {
     content = 'Error executing Python code: \n```' + err + '\n```';
     logger.error('Failed to execute python code:', err);
-    context.onProgress({ type: 'content', content: content });
+    context.onProgress({ type: 'markdown', content: content });
   }
 
   return content;
@@ -63,7 +63,7 @@ const executePythonFile = async (context: ToolContext, filename: string, args: s
       content = `Error executing Python file: ${(error as Error).message}`;
     }
   }
-  context.onProgress({ type: 'content', content });
+  context.onProgress({ type: 'markdown', content });
   return content;
 };
 
diff --git a/src/tools/impl/read_file.ts b/src/tools/impl/read_file.ts
index b06f075..905eb34 100644
--- a/src/tools/impl/read_file.ts
+++ b/src/tools/impl/read_file.ts
@@ -17,9 +17,12 @@ const read_file = async (context: ToolContext, filename: string, encoding?: Buff
   const contents = await fileStorage.readFile(filePath);
 
   context.onProgress({
-    type: 'inlineContentReference',
-    title: `read_file('${path.basename(filePath)}')`,
-    inlineReference: filePath,
+    type: 'command',
+    command: {
+      title: `read_file('${path.basename(filePath)}')`,
+      command: TOOL_READ_FILE,
+      arguments: [filePath],
+    },
   });
 
   return contents.toString(encoding);
diff --git a/src/tools/impl/write_file.ts b/src/tools/impl/write_file.ts
index 84e7e07..642b365 100644
--- a/src/tools/impl/write_file.ts
+++ b/src/tools/impl/write_file.ts
@@ -17,9 +17,12 @@ const write_file = async (context: ToolContext, filename: string, contents: stri
   await fileStorage.saveTextFile(filePath, contents);
 
   context.onProgress({
-    type: 'inlineContentReference',
-    title: `write_file(${path.basename(filename)})`,
-    inlineReference: filePath,
+    type: 'command',
+    command: {
+      title: `write_file('${path.basename(filePath)}')`,
+      command: TOOL_WRITE_FILE,
+      arguments: [filePath],
+    },
   });
 };