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Merge pull request #282 from mcwdsi/issue272
fixes #272
2 parents e24846b + 1a33131 commit 40f2c08

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‎src/ontology/omrse-edit.owl

Lines changed: 41 additions & 32 deletions
Original file line numberDiff line numberDiff line change
@@ -1719,11 +1719,11 @@ AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000130 "A physician role that in
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AnnotationAssertion(rdfs:label obo:OMRSE_00000130 "anesthesiologist role"@en)
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SubClassOf(obo:OMRSE_00000130 obo:OMRSE_00000013)
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1722-
# Class: obo:OMRSE_00000131 (OMB racial identification process)
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# Class: obo:OMRSE_00000131 (obsolete OMB racial identification process)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000131 "OMB racial identification process"@en)
1725-
SubClassOf(obo:OMRSE_00000131 obo:OMRSE_00000099)
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SubClassOf(obo:OMRSE_00000131 ObjectSomeValuesFrom(obo:OBI_0000299 obo:OMRSE_00000185))
1724+
AnnotationAssertion(rdfs:label obo:OMRSE_00000131 "obsolete OMB racial identification process"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000131 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000131 oboInOwl:ObsoleteClass)
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# Class: obo:OMRSE_00000132 (obsolete identity datum)
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@@ -2272,7 +2272,7 @@ AnnotationAssertion(rdfs:comment obo:OMRSE_00000205 "Ethnicity is separate from
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AnnotationAssertion(rdfs:label obo:OMRSE_00000205 "ethnic identity information content entity"@en)
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SubClassOf(obo:OMRSE_00000205 obo:OMRSE_00000204)
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2275-
# Class: obo:OMRSE_00000206 (OMB ethnic identity information content entity)
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# Class: obo:OMRSE_00000206 (obsolete OMB ethnic identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000206 "An ethnic identity information content entity that uses OMB terminology for ethnicity or terminology that is strictly mapped onto the OMB ethnicity terms."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000206 "S. Clint Dowland"@en)
@@ -2282,10 +2282,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000206 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000206 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000206 "William R. Hogan"@en)
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AnnotationAssertion(rdfs:comment obo:OMRSE_00000206 "OMB dichotomizes ethnicity into Hispanic or Latino and Not Hispanic or Latino, and ignores all other forms of ethnicity."@en)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000206 "OMB ethnic identity information content entity"@en)
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SubClassOf(obo:OMRSE_00000206 obo:OMRSE_00000205)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000206 "obsolete OMB ethnic identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000206 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000206 oboInOwl:ObsoleteClass)
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# Class: obo:OMRSE_00000207 (OMB Hispanic or Latino identity information content entity)
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# Class: obo:OMRSE_00000207 (obsolete OMB Hispanic or Latino identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000207 "An OMB ethnic identity information content entity that is about some person's identifying as Hispanic or Latino, which are intended to mean being of Cuban, Mexican, Puerto Rican, South or Central American, or other Spanish culture or origin, regardless of race."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000207 "S. Clint Dowland"@en)
@@ -2295,10 +2296,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000207 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000207 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000207 "William R. Hogan"@en)
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AnnotationAssertion(rdfs:comment obo:OMRSE_00000207 "It comprehends people of Portuguese culture or origin in Brazil."@en)
2298-
AnnotationAssertion(rdfs:label obo:OMRSE_00000207 "OMB Hispanic or Latino identity information content entity"@en)
2299-
SubClassOf(obo:OMRSE_00000207 obo:OMRSE_00000206)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000207 "obsolete OMB Hispanic or Latino identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000207 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000207 oboInOwl:ObsoleteClass)
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2301-
# Class: obo:OMRSE_00000208 (OMB not Hispanic or Latino identity information content entity)
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# Class: obo:OMRSE_00000208 (obsolete OMB not Hispanic or Latino identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000208 "An OMB ethnic identity information content entity that is about some person's identifying as neither Hispanic nor Latino, which are intended to mean being of Cuban, Mexican, Puerto Rican, South or Central American, or other Spanish culture or origin, regardless of race."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000208 "S. Clint Dowland"@en)
@@ -2307,8 +2309,9 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000208 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000208 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000208 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000208 "William R. Hogan"@en)
2310-
AnnotationAssertion(rdfs:label obo:OMRSE_00000208 "OMB not Hispanic or Latino identity information content entity"@en)
2311-
SubClassOf(obo:OMRSE_00000208 obo:OMRSE_00000206)
2312+
AnnotationAssertion(rdfs:label obo:OMRSE_00000208 "obsolete OMB not Hispanic or Latino identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000208 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000208 oboInOwl:ObsoleteClass)
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# Class: obo:OMRSE_00000209 (gender identity information content entity)
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@@ -2370,7 +2373,7 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000213 "William R. Hogan"@en)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000213 "racial identity information content entity"@en)
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SubClassOf(obo:OMRSE_00000213 obo:OMRSE_00000204)
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2373-
# Class: obo:OMRSE_00000214 (OMB racial identity information content entity)
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# Class: obo:OMRSE_00000214 (obsolete OMB racial identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000214 "A racial identity information content entity that uses OMB terminology and definitions for race or terminology that is strictly mapped onto the OMB race terms."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000214 "S. Clint Dowland"@en)
@@ -2379,10 +2382,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000214 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000214 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000214 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000214 "William R. Hogan"@en)
2382-
AnnotationAssertion(rdfs:label obo:OMRSE_00000214 "OMB racial identity information content entity"@en)
2383-
SubClassOf(obo:OMRSE_00000214 obo:OMRSE_00000213)
2385+
AnnotationAssertion(rdfs:label obo:OMRSE_00000214 "obsolete OMB racial identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000214 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000214 oboInOwl:ObsoleteClass)
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2385-
# Class: obo:OMRSE_00000215 (OMB American Indian or Alaska Native identity information content entity)
2389+
# Class: obo:OMRSE_00000215 (obsolete OMB American Indian or Alaska Native identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000215 "An OMB racial identity information content entity that is about some person's identifying as American Indian or Alaska Native, which is intended to mean having origins in any of the original peoples of North and South America (including Central America), and maintains tribal affiliation or community attachment."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000215 "S. Clint Dowland"@en)
@@ -2392,10 +2396,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000215 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000215 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000215 "William R. Hogan"@en)
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AnnotationAssertion(rdfs:comment obo:OMRSE_00000215 "This definition corresponds to that used by OMB. It is worth noting that the OMB definition from which this one is derived is problematic, in that it implies that one's race cannot be Native American or Alaskan Native unless one maintains tribal affiliations or community attachment."@en)
2395-
AnnotationAssertion(rdfs:label obo:OMRSE_00000215 "OMB American Indian or Alaska Native identity information content entity"@en)
2396-
SubClassOf(obo:OMRSE_00000215 obo:OMRSE_00000214)
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AnnotationAssertion(rdfs:label obo:OMRSE_00000215 "obsolete OMB American Indian or Alaska Native identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000215 "true"^^xsd:boolean)
2401+
SubClassOf(obo:OMRSE_00000215 oboInOwl:ObsoleteClass)
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2398-
# Class: obo:OMRSE_00000216 (OMB Asian identity information content entity)
2403+
# Class: obo:OMRSE_00000216 (obsolete OMB Asian identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000216 "An OMB racial identity information content entity that is about some person's identifying as Asian, which is intended to mean having origins in any of the original peoples of the Far East, Southeast Asia, or the Indian subcontinent."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000216 "S. Clint Dowland"@en)
@@ -2404,10 +2409,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000216 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000216 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000216 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000216 "William R. Hogan"@en)
2407-
AnnotationAssertion(rdfs:label obo:OMRSE_00000216 "OMB Asian identity information content entity"@en)
2408-
SubClassOf(obo:OMRSE_00000216 obo:OMRSE_00000214)
2412+
AnnotationAssertion(rdfs:label obo:OMRSE_00000216 "obsolete OMB Asian identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000216 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000216 oboInOwl:ObsoleteClass)
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2410-
# Class: obo:OMRSE_00000217 (OMB black or African American identity information content entity)
2416+
# Class: obo:OMRSE_00000217 (obsolete OMB black or African American identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000217 "An OMB racial identity information content entity that is about some person's identifying as black or African American which is intended to mean having origins in any of the black racial groups of Africa."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000217 "S. Clint Dowland"@en)
@@ -2416,10 +2422,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000217 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000217 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000217 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000217 "William R. Hogan"@en)
2419-
AnnotationAssertion(rdfs:label obo:OMRSE_00000217 "OMB black or African American identity information content entity"@en)
2420-
SubClassOf(obo:OMRSE_00000217 obo:OMRSE_00000214)
2425+
AnnotationAssertion(rdfs:label obo:OMRSE_00000217 "obsolete OMB black or African American identity information content entity"@en)
2426+
AnnotationAssertion(owl:deprecated obo:OMRSE_00000217 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000217 oboInOwl:ObsoleteClass)
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2422-
# Class: obo:OMRSE_00000218 (OMB Native Hawaiian or other Pacific Islander identity information content entity)
2429+
# Class: obo:OMRSE_00000218 (obsolete OMB Native Hawaiian or other Pacific Islander identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000218 "An OMB racial identity information content entity that is about some person's identifying as Native Hawaiian or other Pacific Islander, which is intended to mean having origins in any of the original peoples of Hawaii, Guam, Samoa, or other Pacific Islands."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000218 "S. Clint Dowland"@en)
@@ -2428,10 +2435,11 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000218 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000218 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000218 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000218 "William R. Hogan"@en)
2431-
AnnotationAssertion(rdfs:label obo:OMRSE_00000218 "OMB Native Hawaiian or other Pacific Islander identity information content entity"@en)
2432-
SubClassOf(obo:OMRSE_00000218 obo:OMRSE_00000214)
2438+
AnnotationAssertion(rdfs:label obo:OMRSE_00000218 "obsolete OMB Native Hawaiian or other Pacific Islander identity information content entity"@en)
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AnnotationAssertion(owl:deprecated obo:OMRSE_00000218 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000218 oboInOwl:ObsoleteClass)
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2434-
# Class: obo:OMRSE_00000219 (OMB white identity information content entity)
2442+
# Class: obo:OMRSE_00000219 (obsolete OMB white identity information content entity)
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AnnotationAssertion(obo:IAO_0000115 obo:OMRSE_00000219 "An OMB racial identity information content entity that is about some person's identifying as white which is intended to mean having origins in any of the original peoples of Europe, the Middle East, or North Africa."@en)
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AnnotationAssertion(obo:IAO_0000117 obo:OMRSE_00000219 "S. Clint Dowland"@en)
@@ -2440,8 +2448,9 @@ AnnotationAssertion(dc:contributor obo:OMRSE_00000219 "Mathias Brochhausen"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000219 "Matthew Diller"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000219 "Sarah Bost"@en)
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AnnotationAssertion(dc:contributor obo:OMRSE_00000219 "William R. Hogan"@en)
2443-
AnnotationAssertion(rdfs:label obo:OMRSE_00000219 "OMB white identity information content entity"@en)
2444-
SubClassOf(obo:OMRSE_00000219 obo:OMRSE_00000214)
2451+
AnnotationAssertion(rdfs:label obo:OMRSE_00000219 "obsolete OMB white identity information content entity"@en)
2452+
AnnotationAssertion(owl:deprecated obo:OMRSE_00000219 "true"^^xsd:boolean)
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SubClassOf(obo:OMRSE_00000219 oboInOwl:ObsoleteClass)
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# Class: obo:OMRSE_00000220 (sexual orientation identity information content entity)
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@@ -3741,4 +3750,4 @@ AnnotationAssertion(rdfs:label obo:IAO_0000412 "imported from"@en)
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AnnotationAssertion(owl:deprecated obo:OMIABIS_0000060 "true"^^xsd:boolean)
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AnnotationAssertion(owl:deprecated obo:OMIABIS_0001025 "true"^^xsd:boolean)
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AnnotationAssertion(owl:deprecated obo:OMIABIS_0001035 "true"^^xsd:boolean)
3744-
)
3753+
)

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