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eval/qv.sh meryl command not working #22

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mas160 opened this issue May 7, 2021 · 1 comment
Open

eval/qv.sh meryl command not working #22

mas160 opened this issue May 7, 2021 · 1 comment

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@mas160
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mas160 commented May 7, 2021

Hi,

I am using meryl pipelined with merqury via the script eval/qv.sh which repeatedly put .meryl files as input files but I am constantly getting this error:
Can't interpret '*.0.meryl': not a meryl command, option, or recognized input file.

Is there an error in the script provided or is it an issue with meryl?
even when I try using meryl difference with to .meryl files I get the same error: meryl-1.3/bin/meryl difference 1.meryl 2.meryl output all.meryl I get the error:
Can't interpret '2.meryl': not a meryl command, option, or recognized input file.

Best,

@arangrhie
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Hello, try meryl statistics 2.meryl | head and see if that gives a reasonable kmer count summary.
It seems like 2.meryl is an invalid kmer db.

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