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ktClassifyBLAST error #171

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khoriba opened this issue May 10, 2022 · 0 comments
Open

ktClassifyBLAST error #171

khoriba opened this issue May 10, 2022 · 0 comments

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@khoriba
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khoriba commented May 10, 2022

Hi,

I used KronaTools-2.8.1 which was installed locally, not by conda.
And I encountered the following error.

$ ktClassifyBLAST -p -s blast_result.txt -o test.csv
Loading taxonomy...
Classifying blast_result.txt...
ERROR: Sorted accession to taxID list not found. Was updateAccessions.sh run?

Then, I tried to do updateAccessions.sh. but I got the error.

$ ./updateAccessions.sh 
Fetching accession2taxid/dead_nucl.accession2taxid.gz...

Update failed.
   Is your internet connection okay?

Finally, I solved the problem by bringing all.accession2taxid.sorted which was previously successful in another environment, but is there any way around this error?

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