deploy: c44aa4b

Author: Yurlungur

.nojekyll

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+# Sphinx build info version 1
+# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: a3e09609a1691bc3320d40b15851c1fa
+tags: 645f666f9bcd5a90fca523b33c5a78b7

1.4.0/.buildinfo

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+.. Spiner Documentation master file, created by
+   sphinx-quickstart on Tue Nov 2 16:56:44 2021.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+Spiner: Performance portable routines for generic, tabulated, multi-dimensional data
+=====================================================================================
+
+`Spiner`_ is a library for storing, indexing, and interpolating
+multidimensional data in a performance-portable way. It's intended to
+run on CPUs, GPUs and everything in-between. You can create a table on
+a CPU, copy it to a GPU, and interpolate on it in a GPU kernel, for
+example.
+
+.. _Spiner: https://github.com/lanl/spiner
+
+Spiner also defines (via hdf5) a file format that bundles data
+together with instructions for interpolating it. This means you don't
+have to specify anything to start interpolating, simple load the file
+and evaluate where you want.
+
+Interpolation is linear. Here's an example of 3D interpolation (2D
+slice shown) on a GPU, with second-order convergence:
+
+.. image:: ../../figs/convergence.png
+
+See below for details of how to use spiner in your project and how to
+develop for it.
+
+If you use Spiner and need help, submit an issue to the Spiner
+repository. If you'd like to contribute, just fork and submit a pull
+request. There's a check list in the PR template, and one of the main
+Spiner developers will review your PR.
+
+Spiner also relies on `Ports of Call`_ as a simple performance
+portability layer. Ports of Call is included as a submodule, and
+automatically integrated into the build system.
+
+.. _Ports of Call: https://lanl.github.io/ports-of-call/main/index.html
+
+.. toctree::
+   :maxdepth: 1
+   :caption: Contents:
+
+   src/building
+   src/getting-started
+   src/databox
+   src/interpolation
+   src/sphinx-howto
+
+Indices and tables
+==================
+
+* :ref:`genindex`
+* :ref:`modindex`
+* :ref:`search`
+
+This documentation is approved for unlimited release, LA-UR-22-20363.

1.4.0/.doctrees/environment.pickle

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+.. _building:
+
+Building and Installation
+==========================
+
+``Spiner`` is self-contained and header-only. Clone it as:
+
+.. code-block:: bash
+
+  git clone --recursive [email protected]:lanl/spiner.git
+
+
+Building from source
+^^^^^^^^^^^^^^^^^^^^^
+
+To build tests and install:
+
+.. code-block:: bash
+
+  mkdir -p spiner/bin
+  cd sppiner/bin
+  cmake -DBUILD_TESTING=ON
+  make -j
+  make test
+  make install
+
+Spiner supports a few ``cmake`` configuration options:
+
+* ``BUILD_TESTING`` enables tests
+* ``SPINER_USE_HDF5`` enables support for saving and loading tables as `hdf5`_.
+* ``SPINER_HDF5_INSTALL_DIR`` tells the build system where `hdf5`_ is located.
+* ``SPINER_USE_KOKKOS`` enables `Kokkos`_ as a backend
+* ``SPINER_USE_KOKKOS_SRC`` tells the build system to build `Kokkos`_ from source, and where the source directory is located. Note that if you use this option, you cannot install Spiner, only build the tests.
+* ``SPINER_KOKKOS_INSTALL_DIR`` tells the build system where to find pre-compiled `Kokkos`_
+* ``SPINER_USE_CUDA`` enables the Kokkos cuda backend
+* ``CMAKE_INSTALL_PREFIX`` sets the install location
+* ``CMAKE_BUILD_TYPE`` sets the build type
+* ``SPINER_FORCE_INTERNAL_PORTS`` forces use of a `ports-of-call`_ submodule rather than a system install
+
+.. _`hdf5`: https://www.hdfgroup.org/solutions/hdf5
+
+.. _`Kokkos`: https://github.com/kokkos/kokkos
+
+.. _`ports-of-call`: https://lanl.github.io/ports-of-call/main/index.html
+
+HDF5 is searched for and configured via the usual `cmake`_ machinery.
+
+.. _`cmake`: https://cmake.org/
+
+A ``format_spiner`` target is also added if ``clang-format`` is found, so
+that ``make format_spiner`` will auto-format the repository.
+
+Testing is enabled via `Catch2`_, which is automatically downloaded
+during the cmake configure phase if needed.
+
+.. _`Catch2`: https://github.com/catchorg/Catch2
+
+Spack
+^^^^^^
+
+.. warning::
+  The spack build is currently experimental. 
+  Please report problems you have as github issues.
+
+Although the spackage has not yet made it to the main `Spack`_
+repositories, we provide a spackage for ``Spiner`` within the
+the source repository. If you have spack installed,
+simply call
+
+.. _Spack: https://spack.io/
+
+.. code-block:: bash
+
+  spack repo add spiner/spack-repo
+  spack install spiner
+
+The spack repo supports a few variants:
+
+* ``+kokkos`` enables the Kokkos backend
+* ``+cuda`` enables the cuda backend. A ``cuda_arch`` must be specified.
+* ``+hdf5`` enables HDF5 file support.
+* ``+mpi`` enables parallel hdf5 support
+* ``+python`` installs python, numpy, and matplotlib support
+* ``+doc`` adds tooling for building the docs
+* ``+format`` adds support for clang-format
+
+Including Spiner in your Project
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+Spiner can be included into a cmake project, either in-tree as a
+submodule or after installation via ``find_package``.
+The cmake system provides the ``spiner::spiner`` cmake target.