From f86cc5324750ae43849b8dc9a9fe815d25aba3bc Mon Sep 17 00:00:00 2001 From: zethson Date: Wed, 15 May 2024 15:14:21 +0200 Subject: [PATCH 1/2] :sparkles: Add uberon 2024-02-20 Signed-off-by: zethson --- bionty_base/sources.yaml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/bionty_base/sources.yaml b/bionty_base/sources.yaml index c9762cd2..9b097b75 100644 --- a/bionty_base/sources.yaml +++ b/bionty_base/sources.yaml @@ -116,6 +116,9 @@ CellType: Tissue: uberon: all: + 2024-02-20: + url: http://purl.obolibrary.org/obo/uberon/releases/2024-02-20/uberon.owl + md5: 2048667b5fdf93192384bdf53cafba18 2023-09-05: url: http://purl.obolibrary.org/obo/uberon/releases/2023-09-05/uberon.owl md5: abcee3ede566d1311d758b853ccdf5aa From 8a8a2d4e4f3e147c0b73e282482a95011187b5e9 Mon Sep 17 00:00:00 2001 From: zethson Date: Wed, 15 May 2024 17:43:05 +0200 Subject: [PATCH 2/2] :sparkles: Add efo 3.63 Signed-off-by: zethson --- bionty_base/entities/_experimentalfactor.py | 1 - bionty_base/sources.yaml | 3 +++ 2 files changed, 3 insertions(+), 1 deletion(-) diff --git a/bionty_base/entities/_experimentalfactor.py b/bionty_base/entities/_experimentalfactor.py index 5b9ba613..ad7e101a 100644 --- a/bionty_base/entities/_experimentalfactor.py +++ b/bionty_base/entities/_experimentalfactor.py @@ -1,4 +1,3 @@ -from functools import cached_property from typing import Dict, Literal, Optional import pandas as pd diff --git a/bionty_base/sources.yaml b/bionty_base/sources.yaml index 30232ced..a46ab02d 100644 --- a/bionty_base/sources.yaml +++ b/bionty_base/sources.yaml @@ -194,6 +194,9 @@ Disease: ExperimentalFactor: efo: all: + 3.63.0: + url: http://www.ebi.ac.uk/efo/releases/v3.63.0/efo.owl + md5: 603e6f6981d53d501c5921aa3940b095 3.57.0: url: http://www.ebi.ac.uk/efo/releases/v3.57.0/efo.owl md5: 2ecafc69b3aba7bdb31ad99438505c05