diff --git a/bionty_base/sources/sources.yaml b/bionty_base/sources/sources.yaml index 0dac654c..91898baa 100644 --- a/bionty_base/sources/sources.yaml +++ b/bionty_base/sources/sources.yaml @@ -31,6 +31,9 @@ Organism: website: https://www.ensembl.org ncbitaxon: all: + 2024-02-28: + url: https://github.com/obophenotype/ncbitaxon/releases/download/v2024-02-28/ncbitaxon.owl + md5: 8dd0ae5b87af3509c329824ae508b84e 2023-06-20: url: s3://bionty-assets/df_all__ncbitaxon__2023-06-20__Organism.parquet md5: 00d97ba65627f1cd65636d2df22ea76c @@ -99,6 +102,9 @@ CellLine: CellType: cl: all: + 2024-02-13: + url: http://purl.obolibrary.org/obo/cl/releases/2024-02-13/cl.owl + mod5: d6d962b58c48f372c2c98b71e0833242 2023-08-24: url: http://purl.obolibrary.org/obo/cl/releases/2023-08-24/cl.owl md5: 46e7dd89421f1255cf0191eca1548f73 @@ -116,6 +122,9 @@ CellType: Tissue: uberon: all: + 2024-02-20: + url: http://purl.obolibrary.org/obo/uberon/releases/2024-02-20/uberon.owl + md5: 2048667b5fdf93192384bdf53cafba18 2023-09-05: url: http://purl.obolibrary.org/obo/uberon/releases/2023-09-05/uberon.owl md5: abcee3ede566d1311d758b853ccdf5aa @@ -133,6 +142,9 @@ Tissue: Disease: mondo: all: + 2024-02-06: + url: http://purl.obolibrary.org/obo/mondo/releases/2024-02-06/mondo.owl + md5: 78914fa236773c5ea6605f7570df6245 2023-08-02: url: http://purl.obolibrary.org/obo/mondo/releases/2023-08-02/mondo.owl md5: 7f33767422042eec29f08b501fc851db @@ -149,6 +161,9 @@ Disease: website: https://mondo.monarchinitiative.org doid: human: + 2024-01-31: + url: http://purl.obolibrary.org/obo/doid/releases/2024-01-31/doid.obo + md5: b36c15a4610757094f8db64b78ae2693 2023-03-31: url: http://purl.obolibrary.org/obo/doid/releases/2023-03-31/doid.obo md5: 64f083a1e47867c307c8eae308afc3bb @@ -173,6 +188,9 @@ Disease: ExperimentalFactor: efo: all: + 3.63.0: + url: http://www.ebi.ac.uk/efo/releases/v3.63.0/efo.owl + md5: 603e6f6981d53d501c5921aa3940b095 3.57.0: url: http://www.ebi.ac.uk/efo/releases/v3.57.0/efo.owl md5: 2ecafc69b3aba7bdb31ad99438505c05 @@ -184,6 +202,9 @@ ExperimentalFactor: Phenotype: hp: human: + 2024-03-06: + url: https://github.com/obophenotype/human-phenotype-ontology/releases/download/v2024-03-06/hp.owl + md5: 36b0d00c24a68edb9131707bc146a4c7 2023-06-17: url: https://github.com/obophenotype/human-phenotype-ontology/releases/download/v2023-06-17/hp.owl md5: 65e8d96bc81deb893163927063b10c06 @@ -197,6 +218,9 @@ Phenotype: website: https://hpo.jax.org mp: mammalian: + 2024-02-07: + url: https://github.com/mgijax/mammalian-phenotype-ontology/releases/download/v2024-02-07/mp.owl + md5: 31c27ed2c7d5774f8b20a77e4e1fd278 2023-05-31: url: https://github.com/mgijax/mammalian-phenotype-ontology/releases/download/v2023-05-31/mp.owl md5: be89052cf6d9c0b6197038fe347ef293 @@ -204,6 +228,9 @@ Phenotype: website: https://github.com/mgijax/mammalian-phenotype-ontology zp: zebrafish: + 2024-01-22: + url: https://github.com/obophenotype/zebrafish-phenotype-ontology/releases/download/v2024-01-22/zp.owl + md5: 01600a5d392419b27fc567362d4cfff8 2022-12-17: url: https://github.com/obophenotype/zebrafish-phenotype-ontology/releases/download/v2022-12-17/zp.owl md5: 03430b567bf153216c0fa4c3440b3b24 @@ -226,6 +253,9 @@ Phenotype: Pathway: go: all: + 2024-01-17: + url: https://data.bioontology.org/ontologies/GO/submissions/1819/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb + md5: 7e6b9974184dda306e6e07631f1783af 2023-05-10: url: https://data.bioontology.org/ontologies/GO/submissions/1814/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb md5: e9845499eadaef2418f464cd7e9ac92e @@ -233,6 +263,9 @@ Pathway: website: http://geneontology.org pw: all: + 7.82: + url: https://data.bioontology.org/ontologies/PW/submissions/112/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb + md5: 392eb131d0513f9a186128ea4935edc9 7.79: url: https://data.bioontology.org/ontologies/PW/submissions/109/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb md5: 02e2337bb1ab7cc4332ef6acc4cbdfa6 @@ -249,6 +282,9 @@ BFXPipeline: Drug: dron: all: + 2024-03-02: + url: https://data.bioontology.org/ontologies/DRON/submissions/22/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb + md5: 84138459de4f65034e979f4e46783747 2023-03-10: url: https://data.bioontology.org/ontologies/DRON/submissions/17/download?apikey=8b5b7825-538d-40e0-9e9e-5ab9274a9aeb md5: 75e86011158fae76bb46d96662a33ba3