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change_capitalization_in_columns.pl
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change_capitalization_in_columns.pl
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#!/usr/bin/env perl
# Changes capitalization of values in specified columns: all capitalized, all lowercase,
# or first letter capitalized.
# Usage:
# perl change_capitalization_in_columns.pl [table]
# [uc to make all values uppercase, lc to make all values lowercase, first to capitalize first letter]
# "[title of column to capitalize]" "[title of another column to capitalize]"
# "[title of another column to capitalize]" [etc.]
# Prints to console. To print to file, use
# perl change_capitalization_in_columns.pl [table]
# [uc to make all values uppercase, lc to make all values lowercase, first to capitalize first letter]
# "[title of column to capitalize]" "[title of another column to capitalize]"
# "[title of another column to capitalize]" [etc.] > [output table path]
use strict;
use warnings;
my $table = $ARGV[0];
my $capitalization_option = $ARGV[1];
my @titles_of_columns_to_capitalize = @ARGV[2..$#ARGV];
my $NEWLINE = "\n";
my $DELIMITER = "\t";
# verifies that input file exists and is not empty
if(!$table or !-e $table or -z $table)
{
print STDERR "Error: table not provided, does not exist, or empty:\n\t"
.$table."\nExiting.\n";
die;
}
# verifies that we have been provided column titles
if(!scalar @titles_of_columns_to_capitalize)
{
print STDERR "Error: no column titles provided. Exiting.\n";
die;
}
# converts array of column titles to a hash
my %title_is_of_column_to_capitalize = (); # key: column title -> value: 1 if column has dates
my %column_title_to_column = (); # key: included column title -> value: column
foreach my $column_title(@titles_of_columns_to_capitalize)
{
$title_is_of_column_to_capitalize{$column_title} = 1;
$column_title_to_column{$column_title} = -1;
}
# reads in and processes input table
my $first_line = 1;
my %column_is_column_to_capitalize = (); # key: column (0-indexed) -> value: 1 if column has dates
open TABLE, "<$table" || die "Could not open $table to read; terminating =(\n";
while(<TABLE>) # for each row in the file
{
chomp;
my $line = $_;
if($line =~ /\S/) # if row not empty
{
my @items_in_line = split($DELIMITER, $line, -1);
if($first_line) # column titles
{
# identifies columns to include
my $column = 0;
foreach my $column_title(@items_in_line)
{
if(defined $column_title and $title_is_of_column_to_capitalize{$column_title})
{
$column_is_column_to_capitalize{$column} = 1;
$column_title_to_column{$column_title} = $column;
}
$column++;
}
# verifies that we have found all columns to include
foreach my $column_title(keys %column_title_to_column)
{
if($column_title_to_column{$column_title} == -1)
{
print STDERR "Error: expected column title ".$column_title
." not found in table ".$table."\nExiting.\n";
die;
}
}
# print header line as is
print $line.$NEWLINE;
$first_line = 0; # next line is not column titles
}
else # column values (not column titles)
{
# prints all values, replacing values in columns to search
my $column = 0;
foreach my $value(@items_in_line)
{
# prints delimiter
if($column > 0)
{
print $DELIMITER;
}
# capitalizes values if this is a column to capitalize
if($column_is_column_to_capitalize{$column})
{
if(defined $value and length $value)
{
if($capitalization_option eq "uc") # uc to make all values uppercase
{
$value = uc $value;
}
elsif($capitalization_option eq "lc") # lc to make all values lowercase
{
$value = lc $value;
}
elsif($capitalization_option eq "first") # first to capitalize first letter
{
my @words = split(" ", $value, -1);
my $index = 0;
foreach my $word(@words)
{
$words[$index] = lc $words[$index];
$words[$index] = ucfirst $words[$index];
$index++;
}
$value = join(" ", @words);
}
else
{
print STDERR "Error: capitalization option ".$capitalization_option
." not recognized. Exiting.\n";
die;
}
}
}
# prints value
if(defined $value and length $value)
{
print $value;
}
$column++;
}
print $NEWLINE;
}
}
}
close TABLE;
# August 24, 2021