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Speed up GEE mode #241
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jr-leary7
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Oct 10, 2024
commit cff92ec addresses this to some extent ... still more to be done though |
summary: |
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changed scale.fix to TRUE throughout -- related to #241
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Eigen
matrix multiplication viaRcppEigen
versus doing so using the efficientMatrix
package, and change toMatrix
if it's bettersummary.gamlss()
inbackward_sel_WIC()
with a getter function for the wald statistics based on the variance-covariance matrix and coefficient values, calculated like so:score_fun_gee()
, which is taking the most time currently (based on profiling withprofvis
)stats::lm.fit()
in several scoring functions withRcppEigen::fastLmPure()
as it seems to be about twice as fast (mean of 66mcs vs. 131mcs usingmicrobenchmark
with 500 trials)The text was updated successfully, but these errors were encountered: