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placed2.txt
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placed2.txt
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1 no_match 0 0 scaffold1_size20154211_pilon 1 24430
2 chromosome_3 2216158 2216068 scaffold1_size20154211_pilon 24431 24521
3 no_match 0 0 scaffold1_size20154211_pilon 24522 32919
4 chromosome_17 2183549 2183674 scaffold1_size20154211_pilon 32920 33045
5 no_match 0 0 scaffold1_size20154211_pilon 33046 45860
6 chromosome_9 5319492 5320059 scaffold1_size20154211_pilon 45861 46428
7 no_match 0 0 scaffold1_size20154211_pilon 46429 64703
8 chromosome_7 6091948 6092034 scaffold1_size20154211_pilon 64704 64790
9 no_match 0 0 scaffold1_size20154211_pilon 64791 88878
10 chromosome_10 783169 783291 scaffold1_size20154211_pilon 88879 89001
11 no_match 0 0 scaffold1_size20154211_pilon 89002 133201
12 chromosome_3 6934838 6916907 scaffold1_size20154211_pilon 133202 151129
13 no_match 0 0 scaffold1_size20154211_pilon 151130 183476
-1 chromosome_3 6953166 6949777 scaffold1_size20154211_pilon 183477 186866
31 no_match 0 0 scaffold1_size20154211_pilon 186867 187183
32 chromosome_14 2590214 2590340 scaffold1_size20154211_pilon 187184 187310
33 no_match 0 0 scaffold1_size20154211_pilon 187311 187384
34 chromosome_1 7888982 7832494 scaffold1_size20154211_pilon 187385 243867
-1 chromosome_1 7820164 7794290 scaffold1_size20154211_pilon 243863 269737
51 no_match 0 0 scaffold1_size20154211_pilon 269738 269742
52 chromosome_1 7637395 7636048 scaffold1_size20154211_pilon 269743 271090
53 no_match 0 0 scaffold1_size20154211_pilon 271091 276171
54 chromosome_1 7636050 7595382 scaffold1_size20154211_pilon 276172 316826
55 no_match 0 0 scaffold1_size20154211_pilon 316827 316975
56 chromosome_1 7595246 7592883 scaffold1_size20154211_pilon 316976 319332
57 no_match 0 0 scaffold1_size20154211_pilon 319333 322632
-1 chromosome_1 7532678 7521696 scaffold1_size20154211_pilon 322633 333615
5333 no_match 0 0 scaffold1_size20154211_pilon 333616 333658
5334 chromosome_10 6215558 6200238 scaffold1_size20154211_pilon 333659 348978
-1 chromosome_10 6199046 6070496 scaffold1_size20154211_pilon 348935 477485
61 no_match 0 0 scaffold1_size20154211_pilon 477486 481220
62 chromosome_1 7287994 7286366 scaffold1_size20154211_pilon 481221 482849
63 no_match 0 0 scaffold1_size20154211_pilon 482850 484890
3053 chromosome_17 6359962 6359649 scaffold1_size20154211_pilon 484891 485204
3054 no_match 0 0 scaffold1_size20154211_pilon 485205 494219
3055 chromosome_6 504319 503971 scaffold1_size20154211_pilon 494220 494566
3056 no_match 0 0 scaffold1_size20154211_pilon 494567 496327
3057 chromosome_2 2615831 2615976 scaffold1_size20154211_pilon 496328 496473
3058 no_match 0 0 scaffold1_size20154211_pilon 496474 501193
3059 chromosome_4 733801 734196 scaffold1_size20154211_pilon 501194 501589
3060 no_match 0 0 scaffold1_size20154211_pilon 501590 502544
3061 chromosome_2 6855937 6856586 scaffold1_size20154211_pilon 502545 503215
3062 no_match 0 0 scaffold1_size20154211_pilon 503216 550674
3063 chromosome_12 6870406 6961866 scaffold1_size20154211_pilon 550675 642114
3064 chromosome_12 6961967 7021045 scaffold1_size20154211_pilon 641774 700840
-1 chromosome_1 7263233 7188670 scaffold1_size20154211_pilon 700841 775404
71 no_match 0 0 scaffold1_size20154211_pilon 775405 778905
72 chromosome_1 6961364 6964169 scaffold1_size20154211_pilon 778906 781656
73 no_match 0 0 scaffold1_size20154211_pilon 781657 787380
74 chromosome_1 6969897 6972647 scaffold1_size20154211_pilon 787381 790186
75 no_match 0 0 scaffold1_size20154211_pilon 790187 792211
76 chromosome_17 2205546 2206541 scaffold1_size20154211_pilon 792212 793293
77 no_match 0 0 scaffold1_size20154211_pilon 793294 806728
78 chromosome_6 5404195 5404131 scaffold1_size20154211_pilon 806729 806793
79 no_match 0 0 scaffold1_size20154211_pilon 806794 813968
80 chromosome_1 6919550 6919988 scaffold1_size20154211_pilon 813969 814403
81 no_match 0 0 scaffold1_size20154211_pilon 814404 831550
82 chromosome_1 6937138 6937572 scaffold1_size20154211_pilon 831551 831989
83 no_match 0 0 scaffold1_size20154211_pilon 831990 835637
84 chromosome_1 6914790 6912912 scaffold1_size20154211_pilon 835638 837497
85 no_match 0 0 scaffold1_size20154211_pilon 837498 843549
86 chromosome_6 6224709 6223144 scaffold1_size20154211_pilon 843550 845294
87 no_match 0 0 scaffold1_size20154211_pilon 845295 847113
88 chromosome_6 6223144 6218222 scaffold1_size20154211_pilon 847114 851971
89 no_match 0 0 scaffold1_size20154211_pilon 851972 857176
90 chromosome_13 3541404 3540998 scaffold1_size20154211_pilon 857177 857550
91 no_match 0 0 scaffold1_size20154211_pilon 857551 857834
92 chromosome_17 3570712 3568745 scaffold1_size20154211_pilon 857835 859803
93 no_match 0 0 scaffold1_size20154211_pilon 859804 860897
-1 chromosome_1 6750148 6721514 scaffold1_size20154211_pilon 860898 889532
112 no_match 0 0 scaffold1_size20154211_pilon 889533 891852
-1 chromosome_1 6275676 6264046 scaffold1_size20154211_pilon 891853 903483
-1 chromosome_1 6043506 5998841 scaffold1_size20154211_pilon 903484 948149
115 no_match 0 0 scaffold1_size20154211_pilon 948150 966362
116 chromosome_1 5995699 5949746 scaffold1_size20154211_pilon 966363 1012275
117 no_match 0 0 scaffold1_size20154211_pilon 1012276 1014107
118 chromosome_1 5948998 5948364 scaffold1_size20154211_pilon 1014108 1014741
119 no_match 0 0 scaffold1_size20154211_pilon 1014742 1019414
3608 chromosome_2 7766599 7751305 scaffold1_size20154211_pilon 1019415 1034524
3609 no_match 0 0 scaffold1_size20154211_pilon 1034525 1034677
-1 chromosome_2 7706795 7691162 scaffold1_size20154211_pilon 1034678 1050311
3619 no_match 0 0 scaffold1_size20154211_pilon 1050312 1052415
3620 chromosome_2 7471431 7463918 scaffold1_size20154211_pilon 1052416 1059925
3621 no_match 0 0 scaffold1_size20154211_pilon 1059926 1060501
3622 chromosome_2 7463918 7461632 scaffold1_size20154211_pilon 1060502 1062778
3623 no_match 0 0 scaffold1_size20154211_pilon 1062779 1062999
3624 chromosome_2 7461531 7455384 scaffold1_size20154211_pilon 1063000 1069144
3625 no_match 0 0 scaffold1_size20154211_pilon 1069145 1069207
-1 chromosome_2 7095548 6982193 scaffold1_size20154211_pilon 1069208 1182563
-1 chromosome_1 5928457 5923909 scaffold1_size20154211_pilon 1182564 1187112
-1 chromosome_1 4857646 4853571 scaffold1_size20154211_pilon 1187113 1191188
-1 chromosome_1 4515451 4514694 scaffold1_size20154211_pilon 1191189 1191946
2668 chromosome_3 2791161 2860076 scaffold1_size20154211_pilon 1191947 1260800
-1 chromosome_3 2859471 2980951 scaffold1_size20154211_pilon 1260315 1381795
2692 no_match 0 0 scaffold1_size20154211_pilon 1381796 1382942
2693 chromosome_3 3525288 3533090 scaffold1_size20154211_pilon 1382943 1390735
2694 no_match 0 0 scaffold1_size20154211_pilon 1390736 1415964
2695 chromosome_3 3557278 3588087 scaffold1_size20154211_pilon 1415965 1446790
2696 no_match 0 0 scaffold1_size20154211_pilon 1446791 1446874
2697 chromosome_3 3588347 3615293 scaffold1_size20154211_pilon 1446875 1473813
2698 no_match 0 0 scaffold1_size20154211_pilon 1473814 1474318
2699 scaffold_50 12727 1 scaffold1_size20154211_pilon 1474319 1487045
2700 no_match 0 0 scaffold1_size20154211_pilon 1487046 1487096
2701 chromosome_3 3620029 3678324 scaffold1_size20154211_pilon 1487097 1545387
2702 chromosome_12 7793447 7791833 scaffold1_size20154211_pilon 1545387 1547001
2703 no_match 0 0 scaffold1_size20154211_pilon 1547002 1547003
2704 chromosome_3 3678328 3751377 scaffold1_size20154211_pilon 1547004 1620055
-1 chromosome_12 3207940 3437329 scaffold1_size20154211_pilon 1620056 1849445
-1 chromosome_1 4016703 4004728 scaffold1_size20154211_pilon 1849446 1861421
156 no_match 0 0 scaffold1_size20154211_pilon 1861422 1861449
157 chromosome_1 4004627 4002671 scaffold1_size20154211_pilon 1861450 1863406
158 no_match 0 0 scaffold1_size20154211_pilon 1863407 1864781
159 chromosome_1 4001394 3996032 scaffold1_size20154211_pilon 1864782 1870144
160 no_match 0 0 scaffold1_size20154211_pilon 1870145 1872819
2748 chromosome_3 5494266 5524627 scaffold1_size20154211_pilon 1872820 1903179
2749 no_match 0 0 scaffold1_size20154211_pilon 1903180 1908990
2750 chromosome_3 5523906 5692971 scaffold1_size20154211_pilon 1908991 2078037
2284 chromosome_12 7694978 7457519 scaffold1_size20154211_pilon 2078038 2315461
-1 chromosome_1 3896504 3705977 scaffold1_size20154211_pilon 2315462 2505989
3983 no_match 0 0 scaffold1_size20154211_pilon 2505990 2512825
3984 chromosome_10 5198678 5133855 scaffold1_size20154211_pilon 2512826 2577655
3985 no_match 0 0 scaffold1_size20154211_pilon 2577656 2577815
3986 chromosome_10 5133754 5088953 scaffold1_size20154211_pilon 2577816 2622615
3987 chromosome_10 5088921 5051612 scaffold1_size20154211_pilon 2622611 2659946
3988 no_match 0 0 scaffold1_size20154211_pilon 2659947 2660322
3989 chromosome_10 5051735 4979675 scaffold1_size20154211_pilon 2660323 2732360
-1 chromosome_12 3623219 3627862 scaffold1_size20154211_pilon 2732361 2737004
5284 no_match 0 0 scaffold1_size20154211_pilon 2737005 2760316
5285 chromosome_12 3871326 3884725 scaffold1_size20154211_pilon 2760317 2773711
5286 no_match 0 0 scaffold1_size20154211_pilon 2773712 2773739
5287 chromosome_12 3884826 4108960 scaffold1_size20154211_pilon 2773740 2997858
1334 chromosome_13 3530857 3529807 scaffold1_size20154211_pilon 2997859 2998909
1335 chromosome_13 3527539 3513823 scaffold1_size20154211_pilon 2998911 3012626
1336 no_match 0 0 scaffold1_size20154211_pilon 3012627 3018508
1337 chromosome_16 6843476 6844485 scaffold1_size20154211_pilon 3018509 3019518
1338 no_match 0 0 scaffold1_size20154211_pilon 3019519 3020627
1339 chromosome_13 3511415 3512717 scaffold1_size20154211_pilon 3020628 3021930
1340 no_match 0 0 scaffold1_size20154211_pilon 3021931 3028415
1341 chromosome_13 3510353 3482444 scaffold1_size20154211_pilon 3028416 3056302
1342 no_match 0 0 scaffold1_size20154211_pilon 3056303 3088123
1343 chromosome_13 3482305 3309893 scaffold1_size20154211_pilon 3088124 3260524
1344 no_match 0 0 scaffold1_size20154211_pilon 3260525 3260822
1345 chromosome_13 3309901 3274919 scaffold1_size20154211_pilon 3260823 3295795
1346 no_match 0 0 scaffold1_size20154211_pilon 3295796 3300979
1347 chromosome_13 3271792 3267767 scaffold1_size20154211_pilon 3300980 3305005
1348 no_match 0 0 scaffold1_size20154211_pilon 3305006 3306700
1349 chromosome_13 3265709 3265002 scaffold1_size20154211_pilon 3306701 3307408
1350 no_match 0 0 scaffold1_size20154211_pilon 3307409 3307581
1351 chromosome_13 3264901 3235146 scaffold1_size20154211_pilon 3307582 3337331
-1 chromosome_1 3289967 3288245 scaffold1_size20154211_pilon 3337332 3339054
169 no_match 0 0 scaffold1_size20154211_pilon 3339055 3339474
1475 chromosome_13 357188 348104 scaffold1_size20154211_pilon 3339475 3348545
1476 no_match 0 0 scaffold1_size20154211_pilon 3348546 3351174
1477 chromosome_13 329804 253003 scaffold1_size20154211_pilon 3351175 3427972
1478 no_match 0 0 scaffold1_size20154211_pilon 3427973 3428507
1479 chromosome_13 253040 245265 scaffold1_size20154211_pilon 3428508 3436280
1480 no_match 0 0 scaffold1_size20154211_pilon 3436281 3436631
3965 chromosome_10 5713790 5704448 scaffold1_size20154211_pilon 3436632 3445943
-1 chromosome_13 3545346 3812120 scaffold1_size20154211_pilon 3445944 3712718
170 chromosome_1 3288251 3162013 scaffold1_size20154211_pilon 3712719 3838923
171 no_match 0 0 scaffold1_size20154211_pilon 3838924 3842016
172 chromosome_2 1334276 1329189 scaffold1_size20154211_pilon 3842017 3847104
173 chromosome_1 3158781 3119128 scaffold1_size20154211_pilon 3847099 3886739
174 no_match 0 0 scaffold1_size20154211_pilon 3886740 3888001
175 chromosome_1 3117928 2976720 scaffold1_size20154211_pilon 3888002 4029201
176 no_match 0 0 scaffold1_size20154211_pilon 4029202 4082663
177 chromosome_9 3991919 3992450 scaffold1_size20154211_pilon 4082664 4083227
178 no_match 0 0 scaffold1_size20154211_pilon 4083228 4084384
179 chromosome_9 3993577 3993673 scaffold1_size20154211_pilon 4084385 4084481
180 no_match 0 0 scaffold1_size20154211_pilon 4084482 4087731
-1 chromosome_1 2846267 2800087 scaffold1_size20154211_pilon 4087732 4133912
188 no_match 0 0 scaffold1_size20154211_pilon 4133913 4139911
189 chromosome_1 2539326 2460047 scaffold1_size20154211_pilon 4139912 4219186
190 no_match 0 0 scaffold1_size20154211_pilon 4219187 4219294
191 chromosome_1 2459943 2310766 scaffold1_size20154211_pilon 4219295 4368458
192 no_match 0 0 scaffold1_size20154211_pilon 4368459 4368522
193 chromosome_1 2310802 2262979 scaffold1_size20154211_pilon 4368523 4416343
194 chromosome_1 2263154 2143496 scaffold1_size20154211_pilon 4416216 4535897
195 no_match 0 0 scaffold1_size20154211_pilon 4535898 4553748
196 chromosome_1 2125521 2069545 scaffold1_size20154211_pilon 4553749 4609708
197 no_match 0 0 scaffold1_size20154211_pilon 4609709 4609761
198 chromosome_1 2069444 2030600 scaffold1_size20154211_pilon 4609762 4648592
199 no_match 0 0 scaffold1_size20154211_pilon 4648593 4648702
200 chromosome_1 2030472 2029478 scaffold1_size20154211_pilon 4648703 4649696
201 no_match 0 0 scaffold1_size20154211_pilon 4649697 4651588
202 chromosome_1 2028002 2026633 scaffold1_size20154211_pilon 4651589 4652952
203 no_match 0 0 scaffold1_size20154211_pilon 4652953 4653166
204 chromosome_1 2026532 2000058 scaffold1_size20154211_pilon 4653167 4679635
205 no_match 0 0 scaffold1_size20154211_pilon 4679636 4680755
206 chromosome_4 1870220 1870293 scaffold1_size20154211_pilon 4680756 4680829
207 no_match 0 0 scaffold1_size20154211_pilon 4680830 4683957
208 chromosome_1 1990856 1983068 scaffold1_size20154211_pilon 4683958 4691734
209 no_match 0 0 scaffold1_size20154211_pilon 4691735 4692005
210 chromosome_1 1982967 1967420 scaffold1_size20154211_pilon 4692006 4707557
211 no_match 0 0 scaffold1_size20154211_pilon 4707558 4708061
212 chromosome_3 2113945 2113647 scaffold1_size20154211_pilon 4708062 4708362
213 no_match 0 0 scaffold1_size20154211_pilon 4708363 4709744
214 chromosome_1 1966686 1936796 scaffold1_size20154211_pilon 4709745 4739600
215 no_match 0 0 scaffold1_size20154211_pilon 4739601 4743177
216 chromosome_6 511662 510776 scaffold1_size20154211_pilon 4743178 4744027
217 no_match 0 0 scaffold1_size20154211_pilon 4744028 4773344
218 chromosome_1 1903144 1880784 scaffold1_size20154211_pilon 4773345 4795640
219 no_match 0 0 scaffold1_size20154211_pilon 4795641 4795691
220 chromosome_1 1880683 1659416 scaffold1_size20154211_pilon 4795692 5016952
221 no_match 0 0 scaffold1_size20154211_pilon 5016953 5017139
3141 chromosome_4 856916 853689 scaffold1_size20154211_pilon 5017140 5020347
-1 chromosome_8 1159133 953279 scaffold1_size20154211_pilon 5020348 5226202
222 chromosome_1 1659449 1572165 scaffold1_size20154211_pilon 5226203 5313451
223 no_match 0 0 scaffold1_size20154211_pilon 5313452 5313508
224 chromosome_1 1572064 1548254 scaffold1_size20154211_pilon 5313509 5337311
225 no_match 0 0 scaffold1_size20154211_pilon 5337312 5337702
226 chromosome_1 1547902 1546145 scaffold1_size20154211_pilon 5337703 5339460
227 no_match 0 0 scaffold1_size20154211_pilon 5339461 5340082
-1 chromosome_1 1520229 1504200 scaffold1_size20154211_pilon 5340083 5356112
241 no_match 0 0 scaffold1_size20154211_pilon 5356113 5360115
-1 scaffold_28 13526 19022 scaffold1_size20154211_pilon 5360116 5365612
1497 chromosome_11 20647 95946 scaffold1_size20154211_pilon 5365613 5440913
244 scaffold_28 27572 37051 scaffold1_size20154211_pilon 5440914 5450392
245 no_match 0 0 scaffold1_size20154211_pilon 5450393 5450581
246 scaffold_28 37152 42432 scaffold1_size20154211_pilon 5450582 5455862
247 no_match 0 0 scaffold1_size20154211_pilon 5455863 5460390
248 scaffold_28 43633 48658 scaffold1_size20154211_pilon 5460391 5465416
249 no_match 0 0 scaffold1_size20154211_pilon 5465417 5468552
250 scaffold_28 51013 50023 scaffold1_size20154211_pilon 5468553 5469543
251 no_match 0 0 scaffold1_size20154211_pilon 5469544 5480715
252 chromosome_3 6820178 6823896 scaffold1_size20154211_pilon 5480716 5484434
253 no_match 0 0 scaffold1_size20154211_pilon 5484435 5487901
254 chromosome_3 7096061 7099261 scaffold1_size20154211_pilon 5487902 5491102
255 no_match 0 0 scaffold1_size20154211_pilon 5491103 5491721
4266 chromosome_7 3106152 3112533 scaffold1_size20154211_pilon 5491722 5498047
-1 chromosome_3 6985287 6986867 scaffold1_size20154211_pilon 5498048 5499628
2789 chromosome_3 7021600 7023366 scaffold1_size20154211_pilon 5499629 5501395
2790 no_match 0 0 scaffold1_size20154211_pilon 5501396 5510997
2791 scaffold_27 16437 17271 scaffold1_size20154211_pilon 5510998 5511833
2792 no_match 0 0 scaffold1_size20154211_pilon 5511834 5524837
2793 chromosome_6 4526361 4529957 scaffold1_size20154211_pilon 5524838 5528432
2794 no_match 0 0 scaffold1_size20154211_pilon 5528433 5534002
2795 chromosome_9 5389419 5387782 scaffold1_size20154211_pilon 5534003 5535639
2796 no_match 0 0 scaffold1_size20154211_pilon 5535640 5555291
2797 chromosome_3 7100875 7101956 scaffold1_size20154211_pilon 5555292 5556373
2798 no_match 0 0 scaffold1_size20154211_pilon 5556374 5559096
2799 chromosome_3 7106346 7103543 scaffold1_size20154211_pilon 5559097 5561903
2800 no_match 0 0 scaffold1_size20154211_pilon 5561904 5584635
2801 chromosome_3 7134314 7132905 scaffold1_size20154211_pilon 5584636 5586045
2802 no_match 0 0 scaffold1_size20154211_pilon 5586046 5592917
2803 chromosome_2 2628528 2629449 scaffold1_size20154211_pilon 5592918 5593838
2804 no_match 0 0 scaffold1_size20154211_pilon 5593839 5600579
2805 chromosome_3 7140356 7147564 scaffold1_size20154211_pilon 5600580 5607787
2806 no_match 0 0 scaffold1_size20154211_pilon 5607788 5611600
1442 chromosome_13 1738774 1699690 scaffold1_size20154211_pilon 5611601 5650702
1443 no_match 0 0 scaffold1_size20154211_pilon 5650703 5650948
-1 chromosome_13 1490557 1464015 scaffold1_size20154211_pilon 5650949 5677491
1445 no_match 0 0 scaffold1_size20154211_pilon 5677492 5688126
405 chromosome_17 2975038 2943669 scaffold1_size20154211_pilon 5688127 5719482
406 no_match 0 0 scaffold1_size20154211_pilon 5719483 5720671
407 chromosome_11 2204400 2205511 scaffold1_size20154211_pilon 5720672 5721781
408 no_match 0 0 scaffold1_size20154211_pilon 5721782 5737853
409 chromosome_17 2910806 2700225 scaffold1_size20154211_pilon 5737854 5948409
256 chromosome_2 2901377 2903800 scaffold1_size20154211_pilon 5948410 5950834
257 no_match 0 0 scaffold1_size20154211_pilon 5950835 5993550
1156 chromosome_5 991406 969441 scaffold1_size20154211_pilon 5993551 6015507
1157 no_match 0 0 scaffold1_size20154211_pilon 6015508 6015519
1158 chromosome_5 893815 882290 scaffold1_size20154211_pilon 6015520 6027044
1159 chromosome_5 882359 829228 scaffold1_size20154211_pilon 6027025 6080127
1160 no_match 0 0 scaffold1_size20154211_pilon 6080128 6096829
1161 chromosome_16 1490456 1490370 scaffold1_size20154211_pilon 6096830 6096916
1162 no_match 0 0 scaffold1_size20154211_pilon 6096917 6106451
1163 chromosome_5 801953 801501 scaffold1_size20154211_pilon 6106452 6106904
1164 no_match 0 0 scaffold1_size20154211_pilon 6106905 6107000
-1 chromosome_5 784650 757512 scaffold1_size20154211_pilon 6107001 6134139
1172 no_match 0 0 scaffold1_size20154211_pilon 6134140 6146712
1173 chromosome_5 1993622 2015999 scaffold1_size20154211_pilon 6146713 6169085
-1 chromosome_1 1104741 1089946 scaffold1_size20154211_pilon 6169086 6183881
259 no_match 0 0 scaffold1_size20154211_pilon 6183882 6185621
3366 no_match 0 0 scaffold1_size20154211_pilon 6185622 6199373
3367 chromosome_6 817087 816586 scaffold1_size20154211_pilon 6199374 6199875
3368 no_match 0 0 scaffold1_size20154211_pilon 6199876 6199966
3369 chromosome_6 815540 813231 scaffold1_size20154211_pilon 6199967 6202275
3370 no_match 0 0 scaffold1_size20154211_pilon 6202276 6204005
3371 chromosome_2 2615978 2616601 scaffold1_size20154211_pilon 6204006 6204613
3372 no_match 0 0 scaffold1_size20154211_pilon 6204614 6224319
3373 chromosome_6 4810575 4811079 scaffold1_size20154211_pilon 6224320 6224825
3374 no_match 0 0 scaffold1_size20154211_pilon 6224826 6226730
3375 chromosome_17 6615682 6674700 scaffold1_size20154211_pilon 6226731 6285740
3376 no_match 0 0 scaffold1_size20154211_pilon 6285741 6286010
3377 chromosome_17 6674682 6804358 scaffold1_size20154211_pilon 6286011 6415662
3378 chromosome_17 6804460 6847354 scaffold1_size20154211_pilon 6415663 6458544
3379 no_match 0 0 scaffold1_size20154211_pilon 6458545 6458706
-1 chromosome_17 6847354 6855096 scaffold1_size20154211_pilon 6458707 6466449
3382 no_match 0 0 scaffold1_size20154211_pilon 6466450 6467191
3383 chromosome_17 6912924 6941248 scaffold1_size20154211_pilon 6467192 6495514
3384 no_match 0 0 scaffold1_size20154211_pilon 6495515 6495677
1578 chromosome_11 2185811 2174026 scaffold1_size20154211_pilon 6495678 6507424
1579 no_match 0 0 scaffold1_size20154211_pilon 6507425 6507716
1580 chromosome_11 2087267 2084662 scaffold1_size20154211_pilon 6507717 6510323
260 chromosome_17 6516145 6513344 scaffold1_size20154211_pilon 6510324 6513126
261 no_match 0 0 scaffold1_size20154211_pilon 6513127 6528133
-1 chromosome_12 6653026 6655780 scaffold1_size20154211_pilon 6528134 6530888
-1 chromosome_6 4361228 4183684 scaffold1_size20154211_pilon 6530889 6708433
5849 chromosome_14 2114916 2171333 scaffold1_size20154211_pilon 6708434 6764857
1216 chromosome_5 2437854 2504237 scaffold1_size20154211_pilon 6764858 6831238
1217 no_match 0 0 scaffold1_size20154211_pilon 6831239 6834117
1218 chromosome_5 2505848 2506743 scaffold1_size20154211_pilon 6834118 6835013
1219 no_match 0 0 scaffold1_size20154211_pilon 6835014 6835047
1220 chromosome_5 2506844 2602788 scaffold1_size20154211_pilon 6835048 6930977
3262 chromosome_13 4208240 4250545 scaffold1_size20154211_pilon 6930978 6973273
3542 chromosome_8 2844020 2872249 scaffold1_size20154211_pilon 6973274 7001477
3543 no_match 0 0 scaffold1_size20154211_pilon 7001478 7006571
3544 chromosome_8 2874689 2877539 scaffold1_size20154211_pilon 7006572 7009421
3545 no_match 0 0 scaffold1_size20154211_pilon 7009422 7009943
3546 chromosome_8 2878096 2886897 scaffold1_size20154211_pilon 7009944 7018737
3547 no_match 0 0 scaffold1_size20154211_pilon 7018738 7019451
3548 chromosome_7 1641587 1641511 scaffold1_size20154211_pilon 7019452 7019528
3549 no_match 0 0 scaffold1_size20154211_pilon 7019529 7024472
-1 chromosome_8 2890662 2893349 scaffold1_size20154211_pilon 7024473 7027160
3553 no_match 0 0 scaffold1_size20154211_pilon 7027161 7067396
3554 chromosome_16 286339 286442 scaffold1_size20154211_pilon 7067397 7067500
3555 no_match 0 0 scaffold1_size20154211_pilon 7067501 7067610
3556 chromosome_3 3928343 3929639 scaffold1_size20154211_pilon 7067611 7068908
3557 no_match 0 0 scaffold1_size20154211_pilon 7068909 7071877
-1 scaffold_25 85868 101361 scaffold1_size20154211_pilon 7071878 7087371
5115 no_match 0 0 scaffold1_size20154211_pilon 7087372 7087602
3772 chromosome_2 2811433 2777863 scaffold1_size20154211_pilon 7087603 7121162
5116 chromosome_9 5399443 5400873 scaffold1_size20154211_pilon 7121163 7122591
5117 no_match 0 0 scaffold1_size20154211_pilon 7122592 7171447
5118 chromosome_12 6631588 6631257 scaffold1_size20154211_pilon 7171448 7171779
5119 no_match 0 0 scaffold1_size20154211_pilon 7171780 7174033
5120 chromosome_12 6634723 6634416 scaffold1_size20154211_pilon 7174034 7174340
5121 no_match 0 0 scaffold1_size20154211_pilon 7174341 7175722
5122 chromosome_2 2656510 2656803 scaffold1_size20154211_pilon 7175723 7176017
5123 no_match 0 0 scaffold1_size20154211_pilon 7176018 7177040
5124 chromosome_6 4753112 4756236 scaffold1_size20154211_pilon 7177041 7180169
5125 no_match 0 0 scaffold1_size20154211_pilon 7180170 7187230
5126 chromosome_3 2208942 2202463 scaffold1_size20154211_pilon 7187231 7193716
5127 no_match 0 0 scaffold1_size20154211_pilon 7193717 7213620
5677 no_match 0 0 scaffold1_size20154211_pilon 7213621 7213772
5678 chromosome_17 6471152 6472118 scaffold1_size20154211_pilon 7213773 7214738
5679 no_match 0 0 scaffold1_size20154211_pilon 7214739 7220013
234 chromosome_1 1340620 1334326 scaffold1_size20154211_pilon 7220014 7226299
235 no_match 0 0 scaffold1_size20154211_pilon 7226300 7230436
236 chromosome_6 745584 746573 scaffold1_size20154211_pilon 7230437 7231421
237 no_match 0 0 scaffold1_size20154211_pilon 7231422 7239312
238 scaffold_38 17721 18909 scaffold1_size20154211_pilon 7239313 7240511
239 no_match 0 0 scaffold1_size20154211_pilon 7240512 7254090
-1 chromosome_17 6237424 6216965 scaffold1_size20154211_pilon 7254091 7274550
343 no_match 0 0 scaffold1_size20154211_pilon 7274551 7279015
344 chromosome_17 4597661 4597496 scaffold1_size20154211_pilon 7279016 7279173
345 no_match 0 0 scaffold1_size20154211_pilon 7279174 7284073
346 chromosome_17 4594153 4590315 scaffold1_size20154211_pilon 7284074 7287809
347 no_match 0 0 scaffold1_size20154211_pilon 7287810 7287925
348 chromosome_17 4590315 4514211 scaffold1_size20154211_pilon 7287926 7363976
349 no_match 0 0 scaffold1_size20154211_pilon 7363977 7370982
350 chromosome_17 4508494 4485107 scaffold1_size20154211_pilon 7370983 7394360
351 no_match 0 0 scaffold1_size20154211_pilon 7394361 7394455
352 chromosome_17 4485107 4416878 scaffold1_size20154211_pilon 7394456 7462673
353 no_match 0 0 scaffold1_size20154211_pilon 7462674 7462927
-1 chromosome_17 4368818 4367656 scaffold1_size20154211_pilon 7462928 7464090
357 no_match 0 0 scaffold1_size20154211_pilon 7464091 7465228
358 chromosome_16 6525422 6532944 scaffold1_size20154211_pilon 7465229 7472790
359 no_match 0 0 scaffold1_size20154211_pilon 7472791 7479304
360 chromosome_17 4292050 4292148 scaffold1_size20154211_pilon 7479305 7479402
361 no_match 0 0 scaffold1_size20154211_pilon 7479403 7480077
362 chromosome_17 4292824 4292921 scaffold1_size20154211_pilon 7480078 7480176
363 no_match 0 0 scaffold1_size20154211_pilon 7480177 7484479
-1 chromosome_7 5684475 5811614 scaffold1_size20154211_pilon 7484480 7611619
5619 no_match 0 0 scaffold1_size20154211_pilon 7611620 7612181
5620 chromosome_16 4572183 4567877 scaffold1_size20154211_pilon 7612182 7616488
5621 no_match 0 0 scaffold1_size20154211_pilon 7616489 7620589
5622 chromosome_16 4563774 4521939 scaffold1_size20154211_pilon 7620590 7662432
5623 no_match 0 0 scaffold1_size20154211_pilon 7662433 7662506
5624 chromosome_16 4521952 4519153 scaffold1_size20154211_pilon 7662507 7665306
5625 no_match 0 0 scaffold1_size20154211_pilon 7665307 7665460
5626 chromosome_16 4519052 4510880 scaffold1_size20154211_pilon 7665461 7673636
5627 no_match 0 0 scaffold1_size20154211_pilon 7673637 7673823
5628 chromosome_16 4507835 4497572 scaffold1_size20154211_pilon 7673824 7684086
5629 no_match 0 0 scaffold1_size20154211_pilon 7684087 7690585
5996 chromosome_8 4386954 4369667 scaffold1_size20154211_pilon 7690586 7707842
5997 no_match 0 0 scaffold1_size20154211_pilon 7707843 7708094
5998 chromosome_8 4332272 4300279 scaffold1_size20154211_pilon 7708095 7740085
5999 no_match 0 0 scaffold1_size20154211_pilon 7740086 7766925
6000 chromosome_8 4300383 4288800 scaffold1_size20154211_pilon 7766926 7778509
6001 no_match 0 0 scaffold1_size20154211_pilon 7778510 7778761
6002 chromosome_8 4284349 4267404 scaffold1_size20154211_pilon 7778762 7795703
6003 no_match 0 0 scaffold1_size20154211_pilon 7795704 7795829
6004 chromosome_8 4267232 4174201 scaffold1_size20154211_pilon 7795830 7888852
5012 scaffold_22 88597 98143 scaffold1_size20154211_pilon 7888853 7898404
5013 no_match 0 0 scaffold1_size20154211_pilon 7898405 7900389
5014 scaffold_22 98739 99914 scaffold1_size20154211_pilon 7900390 7901548
5015 no_match 0 0 scaffold1_size20154211_pilon 7901549 7919588
1632 chromosome_2 3301186 3293978 scaffold1_size20154211_pilon 7919589 7926833
1633 no_match 0 0 scaffold1_size20154211_pilon 7926834 7956718
1634 chromosome_2 3128326 3129892 scaffold1_size20154211_pilon 7956719 7958291
1635 no_match 0 0 scaffold1_size20154211_pilon 7958292 8001009
5874 chromosome_14 2828820 2832597 scaffold1_size20154211_pilon 8001010 8004786
5875 no_match 0 0 scaffold1_size20154211_pilon 8004787 8004840
5876 chromosome_14 2890769 2892880 scaffold1_size20154211_pilon 8004841 8006953
5877 no_match 0 0 scaffold1_size20154211_pilon 8006954 8007527
-1 chromosome_2 4342327 4244457 scaffold1_size20154211_pilon 8007528 8105398
-1 chromosome_17 4174404 4042938 scaffold1_size20154211_pilon 8105399 8236865
365 chromosome_17 4043051 4007988 scaffold1_size20154211_pilon 8236866 8271917
366 no_match 0 0 scaffold1_size20154211_pilon 8271918 8271942
367 chromosome_17 4007698 3952824 scaffold1_size20154211_pilon 8271943 8326822
368 no_match 0 0 scaffold1_size20154211_pilon 8326823 8326941
369 chromosome_17 3952723 3920425 scaffold1_size20154211_pilon 8326942 8359242
370 no_match 0 0 scaffold1_size20154211_pilon 8359243 8372637
371 chromosome_2 562691 563270 scaffold1_size20154211_pilon 8372638 8373213
372 no_match 0 0 scaffold1_size20154211_pilon 8373214 8374395
373 chromosome_17 3907042 3907260 scaffold1_size20154211_pilon 8374396 8374614
374 no_match 0 0 scaffold1_size20154211_pilon 8374615 8387066
4391 chromosome_6 6112024 6009703 scaffold1_size20154211_pilon 8387067 8489338
4392 no_match 0 0 scaffold1_size20154211_pilon 8489339 8511444
-1 chromosome_6 5651313 5630357 scaffold1_size20154211_pilon 8511445 8532401
378 no_match 0 0 scaffold1_size20154211_pilon 8532402 8594197
379 chromosome_12 4112833 4112426 scaffold1_size20154211_pilon 8594198 8594600
380 no_match 0 0 scaffold1_size20154211_pilon 8594601 8595690
381 chromosome_17 3591849 3576346 scaffold1_size20154211_pilon 8595691 8611195
382 no_match 0 0 scaffold1_size20154211_pilon 8611196 8611202
383 chromosome_17 3576234 3572607 scaffold1_size20154211_pilon 8611203 8614830
384 no_match 0 0 scaffold1_size20154211_pilon 8614831 8630089
385 chromosome_17 3568744 3491060 scaffold1_size20154211_pilon 8630090 8707786
386 no_match 0 0 scaffold1_size20154211_pilon 8707787 8708248
387 chromosome_6 1060948 1060654 scaffold1_size20154211_pilon 8708249 8708543
388 no_match 0 0 scaffold1_size20154211_pilon 8708544 8732869
389 chromosome_17 3465343 3465975 scaffold1_size20154211_pilon 8732870 8733502
390 no_match 0 0 scaffold1_size20154211_pilon 8733503 8771290
-1 chromosome_10 6552301 6486358 scaffold1_size20154211_pilon 8771291 8837234
2266 no_match 0 0 scaffold1_size20154211_pilon 8837235 8846141
2267 chromosome_12 8751851 8712171 scaffold1_size20154211_pilon 8846142 8885828
2268 no_match 0 0 scaffold1_size20154211_pilon 8885829 8954029
6203 chromosome_12 6155373 6063745 scaffold1_size20154211_pilon 8954030 9045647
-1 chromosome_17 3287420 3232449 scaffold1_size20154211_pilon 9045648 9100619
398 no_match 0 0 scaffold1_size20154211_pilon 9100620 9100700
399 chromosome_17 3149644 3146402 scaffold1_size20154211_pilon 9100701 9103943
400 no_match 0 0 scaffold1_size20154211_pilon 9103944 9106141
3992 chromosome_10 4946171 4900542 scaffold1_size20154211_pilon 9106142 9151760
3993 no_match 0 0 scaffold1_size20154211_pilon 9151761 9192729
3994 chromosome_10 4817326 4810189 scaffold1_size20154211_pilon 9192730 9199867
3995 no_match 0 0 scaffold1_size20154211_pilon 9199868 9199983
3996 chromosome_10 4809382 4781070 scaffold1_size20154211_pilon 9199984 9228275
3997 no_match 0 0 scaffold1_size20154211_pilon 9228276 9228458
3998 chromosome_10 4746617 4654190 scaffold1_size20154211_pilon 9228459 9320868
3999 no_match 0 0 scaffold1_size20154211_pilon 9320869 9325495
4000 chromosome_16 544962 545213 scaffold1_size20154211_pilon 9325496 9325749
4001 no_match 0 0 scaffold1_size20154211_pilon 9325750 9325804
4002 chromosome_10 4651242 4585481 scaffold1_size20154211_pilon 9325805 9391572
-1 chromosome_17 3113367 3027865 scaffold1_size20154211_pilon 9391573 9477075
-1 chromosome_13 651244 646460 scaffold1_size20154211_pilon 9477076 9481860
2248 no_match 0 0 scaffold1_size20154211_pilon 9481861 9491294
2249 chromosome_3 7543146 7541363 scaffold1_size20154211_pilon 9491295 9493078
2250 no_match 0 0 scaffold1_size20154211_pilon 9493079 9493787
2251 chromosome_12 8918646 8916328 scaffold1_size20154211_pilon 9493788 9496094
2252 no_match 0 0 scaffold1_size20154211_pilon 9496095 9496098
2253 chromosome_12 8916201 8911519 scaffold1_size20154211_pilon 9496099 9500701
2254 no_match 0 0 scaffold1_size20154211_pilon 9500702 9500841
2255 chromosome_12 8911519 8860638 scaffold1_size20154211_pilon 9500842 9551711
2256 no_match 0 0 scaffold1_size20154211_pilon 9551712 9577481
2257 chromosome_12 8849127 8832287 scaffold1_size20154211_pilon 9577482 9594327
2258 no_match 0 0 scaffold1_size20154211_pilon 9594328 9594360
2259 chromosome_12 8832186 8803378 scaffold1_size20154211_pilon 9594361 9623171
2260 no_match 0 0 scaffold1_size20154211_pilon 9623172 9638195
2261 chromosome_12 8803381 8802151 scaffold1_size20154211_pilon 9638196 9639426
2262 no_match 0 0 scaffold1_size20154211_pilon 9639427 9639483
2263 chromosome_12 8802155 8790350 scaffold1_size20154211_pilon 9639484 9651288
2264 no_match 0 0 scaffold1_size20154211_pilon 9651289 9651762
-1 chromosome_12 8775660 8754309 scaffold1_size20154211_pilon 9651763 9673114
410 no_match 0 0 scaffold1_size20154211_pilon 9673115 9679956
411 chromosome_17 2694741 2686987 scaffold1_size20154211_pilon 9679957 9687700
412 no_match 0 0 scaffold1_size20154211_pilon 9687701 9688465
-1 chromosome_6 2015258 2002083 scaffold1_size20154211_pilon 9688466 9701641
4719 no_match 0 0 scaffold1_size20154211_pilon 9701642 9701678
4720 chromosome_6 1066457 1062073 scaffold1_size20154211_pilon 9701679 9706052
4721 no_match 0 0 scaffold1_size20154211_pilon 9706053 9707290
4722 chromosome_6 1060313 1053700 scaffold1_size20154211_pilon 9707291 9713800
4723 no_match 0 0 scaffold1_size20154211_pilon 9713801 9713927
4724 chromosome_6 1053700 1038616 scaffold1_size20154211_pilon 9713928 9729014
4725 chromosome_6 1038497 1032272 scaffold1_size20154211_pilon 9729010 9735234
4726 chromosome_6 1032194 1004640 scaffold1_size20154211_pilon 9735216 9762768
4727 no_match 0 0 scaffold1_size20154211_pilon 9762769 9762856
4728 chromosome_6 1004325 1001670 scaffold1_size20154211_pilon 9762857 9765503
4729 no_match 0 0 scaffold1_size20154211_pilon 9765504 9765594
4730 chromosome_2 5037638 5037819 scaffold1_size20154211_pilon 9765595 9765777
4731 no_match 0 0 scaffold1_size20154211_pilon 9765778 9766564
4732 chromosome_6 987189 975620 scaffold1_size20154211_pilon 9766565 9778192
4733 no_match 0 0 scaffold1_size20154211_pilon 9778193 9796267
4734 chromosome_6 975519 971868 scaffold1_size20154211_pilon 9796268 9799907
4735 no_match 0 0 scaffold1_size20154211_pilon 9799908 9816895
4736 chromosome_6 1427676 1427186 scaffold1_size20154211_pilon 9816896 9817386
4737 no_match 0 0 scaffold1_size20154211_pilon 9817387 9818749
4738 chromosome_6 958330 936520 scaffold1_size20154211_pilon 9818750 9840596
4739 no_match 0 0 scaffold1_size20154211_pilon 9840597 9842261
4740 chromosome_6 934350 930312 scaffold1_size20154211_pilon 9842262 9846257
4741 chromosome_6 930217 917288 scaffold1_size20154211_pilon 9846257 9859167
4742 no_match 0 0 scaffold1_size20154211_pilon 9859168 9859416
4743 chromosome_6 917295 913839 scaffold1_size20154211_pilon 9859417 9862818
4744 chromosome_6 913234 897415 scaffold1_size20154211_pilon 9862810 9878620
4747 no_match 0 0 scaffold1_size20154211_pilon 9878621 9878632
4748 chromosome_6 864677 862393 scaffold1_size20154211_pilon 9878633 9880915
4749 no_match 0 0 scaffold1_size20154211_pilon 9880916 9881973
4750 chromosome_6 862402 854373 scaffold1_size20154211_pilon 9881974 9889989
4751 chromosome_6 850362 845881 scaffold1_size20154211_pilon 9889983 9894399
4752 no_match 0 0 scaffold1_size20154211_pilon 9894400 9894649
4753 chromosome_6 845901 833919 scaffold1_size20154211_pilon 9894650 9906657
4754 no_match 0 0 scaffold1_size20154211_pilon 9906658 9906767
413 chromosome_17 2686884 2663206 scaffold1_size20154211_pilon 9906768 9930441
414 no_match 0 0 scaffold1_size20154211_pilon 9930442 9942684
1366 chromosome_13 3114992 3066990 scaffold1_size20154211_pilon 9942685 9990646
1367 no_match 0 0 scaffold1_size20154211_pilon 9990647 10005202
1368 chromosome_13 3041662 3035427 scaffold1_size20154211_pilon 10005203 10011434
-1 no_match 0 6640 scaffold1_size20154211_pilon 10011435 10018075
1373 no_match 0 0 scaffold1_size20154211_pilon 10018076 10018121
1374 chromosome_13 2882741 2860230 scaffold1_size20154211_pilon 10018122 10040631
1375 no_match 0 0 scaffold1_size20154211_pilon 10040632 10040789
1376 chromosome_13 2857140 2802876 scaffold1_size20154211_pilon 10040790 10095047
415 chromosome_17 2650336 2620420 scaffold1_size20154211_pilon 10095048 10124974
416 no_match 0 0 scaffold1_size20154211_pilon 10124975 10124995
417 chromosome_17 2620319 2618753 scaffold1_size20154211_pilon 10124996 10126562
418 no_match 0 0 scaffold1_size20154211_pilon 10126563 10126719
419 chromosome_17 2618652 2605470 scaffold1_size20154211_pilon 10126720 10139898
420 no_match 0 0 scaffold1_size20154211_pilon 10139899 10139994
421 chromosome_17 2605184 2598618 scaffold1_size20154211_pilon 10139995 10146555
422 no_match 0 0 scaffold1_size20154211_pilon 10146556 10146557
423 chromosome_17 2598517 2539847 scaffold1_size20154211_pilon 10146558 10205192
424 chromosome_17 2539721 2538705 scaffold1_size20154211_pilon 10205193 10206211
425 no_match 0 0 scaffold1_size20154211_pilon 10206212 10206494
426 chromosome_17 2538700 2525452 scaffold1_size20154211_pilon 10206495 10219735
427 no_match 0 0 scaffold1_size20154211_pilon 10219736 10219775
428 chromosome_17 2525351 2518026 scaffold1_size20154211_pilon 10219776 10227100
429 no_match 0 0 scaffold1_size20154211_pilon 10227101 10227351
-1 chromosome_17 2428038 2365872 scaffold1_size20154211_pilon 10227352 10289518
462 no_match 0 0 scaffold1_size20154211_pilon 10289519 10295175
463 chromosome_17 1715964 1640920 scaffold1_size20154211_pilon 10295176 10370251
464 no_match 0 0 scaffold1_size20154211_pilon 10370252 10419417
2717 chromosome_3 4430972 4443661 scaffold1_size20154211_pilon 10419418 10432069
-1 chromosome_3 4449342 4460274 scaffold1_size20154211_pilon 10432066 10442998
2723 no_match 0 0 scaffold1_size20154211_pilon 10442999 10443132
2724 chromosome_3 4571356 4602504 scaffold1_size20154211_pilon 10443133 10474256
2725 no_match 0 0 scaffold1_size20154211_pilon 10474257 10474516
2726 chromosome_3 4602605 4690657 scaffold1_size20154211_pilon 10474517 10562551
2727 no_match 0 0 scaffold1_size20154211_pilon 10562552 10570874
2728 chromosome_3 4693319 4931747 scaffold1_size20154211_pilon 10570875 10809282
1599 chromosome_11 1790389 1723168 scaffold1_size20154211_pilon 10809283 10876486
1600 no_match 0 0 scaffold1_size20154211_pilon 10876487 10877635
465 chromosome_17 1569600 1470067 scaffold1_size20154211_pilon 10877636 10977156
466 no_match 0 0 scaffold1_size20154211_pilon 10977157 10977437
2528 chromosome_4 2431127 2500044 scaffold1_size20154211_pilon 10977438 11046325
2529 no_match 0 0 scaffold1_size20154211_pilon 11046326 11046353
228 chromosome_1 1545808 1520230 scaffold1_size20154211_pilon 11046354 11071902
229 no_match 0 0 scaffold1_size20154211_pilon 11071903 11071991
-1 chromosome_1 1399559 1358842 scaffold1_size20154211_pilon 11071992 11112709
-1 chromosome_17 1434247 1433565 scaffold1_size20154211_pilon 11112710 11113392
5209 no_match 0 0 scaffold1_size20154211_pilon 11113393 11113406
5210 chromosome_12 1103640 1360665 scaffold1_size20154211_pilon 11113407 11370434
3387 chromosome_17 7080266 7171892 scaffold1_size20154211_pilon 11370435 11462004
3388 no_match 0 0 scaffold1_size20154211_pilon 11462005 11464777
3389 chromosome_17 7178954 7184191 scaffold1_size20154211_pilon 11464778 11470016
3390 no_match 0 0 scaffold1_size20154211_pilon 11470017 11470237
5482 chromosome_16 6547886 6543609 scaffold1_size20154211_pilon 11470238 11474527
5483 chromosome_16 6521663 6507474 scaffold1_size20154211_pilon 11474518 11488699
5484 no_match 0 0 scaffold1_size20154211_pilon 11488700 11488824
5485 chromosome_16 6507474 6507281 scaffold1_size20154211_pilon 11488825 11489017
5486 chromosome_16 6507149 6501171 scaffold1_size20154211_pilon 11489017 11494937
5487 chromosome_16 6501047 6494496 scaffold1_size20154211_pilon 11494939 11501481
5488 no_match 0 0 scaffold1_size20154211_pilon 11501482 11501495
5489 chromosome_16 6494390 6493568 scaffold1_size20154211_pilon 11501496 11502331
5490 no_match 0 0 scaffold1_size20154211_pilon 11502332 11503373
5491 chromosome_16 6493551 6480386 scaffold1_size20154211_pilon 11503374 11516525
5492 no_match 0 0 scaffold1_size20154211_pilon 11516526 11517850
5493 chromosome_16 6473508 6472987 scaffold1_size20154211_pilon 11517851 11518358
5494 chromosome_16 6472532 6471514 scaffold1_size20154211_pilon 11518359 11519344
5495 chromosome_16 6471069 6467262 scaffold1_size20154211_pilon 11519336 11523150
5496 no_match 0 0 scaffold1_size20154211_pilon 11523151 11523272
5497 chromosome_16 6467172 6465211 scaffold1_size20154211_pilon 11523273 11525326
5498 no_match 0 0 scaffold1_size20154211_pilon 11525327 11525473
5499 chromosome_16 6465208 6464091 scaffold1_size20154211_pilon 11525474 11526604
5500 no_match 0 0 scaffold1_size20154211_pilon 11526605 11527394
5501 chromosome_16 6464076 6450419 scaffold1_size20154211_pilon 11527395 11540976
5502 no_match 0 0 scaffold1_size20154211_pilon 11540977 11541612
5503 chromosome_16 6449818 6449080 scaffold1_size20154211_pilon 11541613 11542348
5504 chromosome_16 6448476 6442334 scaffold1_size20154211_pilon 11542349 11548391
5505 no_match 0 0 scaffold1_size20154211_pilon 11548392 11548598
5506 chromosome_16 6435775 6433207 scaffold1_size20154211_pilon 11548599 11551186
5507 chromosome_16 6432701 6427169 scaffold1_size20154211_pilon 11551188 11556638
5508 no_match 0 0 scaffold1_size20154211_pilon 11556639 11556776
5509 chromosome_16 6427026 6424991 scaffold1_size20154211_pilon 11556777 11558758
5510 no_match 0 0 scaffold1_size20154211_pilon 11558759 11559052
5511 chromosome_16 6424788 6424438 scaffold1_size20154211_pilon 11559053 11559422
5512 no_match 0 0 scaffold1_size20154211_pilon 11559423 11559709
5513 chromosome_16 6424253 6419447 scaffold1_size20154211_pilon 11559710 11564532
5514 no_match 0 0 scaffold1_size20154211_pilon 11564533 11564633
5515 chromosome_16 6419438 6410956 scaffold1_size20154211_pilon 11564634 11573128
2457 chromosome_11 2525974 2535875 scaffold1_size20154211_pilon 11573124 11583016
2458 no_match 0 0 scaffold1_size20154211_pilon 11583017 11590151
2459 chromosome_11 2535870 2581789 scaffold1_size20154211_pilon 11590152 11636082
2460 no_match 0 0 scaffold1_size20154211_pilon 11636083 11657315
808 chromosome_17 258115 194754 scaffold1_size20154211_pilon 11657316 11720651
809 no_match 0 0 scaffold1_size20154211_pilon 11720652 11720812
810 chromosome_17 194653 150881 scaffold1_size20154211_pilon 11720813 11764576
811 no_match 0 0 scaffold1_size20154211_pilon 11764577 11765532
4395 chromosome_6 5630365 5496452 scaffold1_size20154211_pilon 11765533 11899421
4396 no_match 0 0 scaffold1_size20154211_pilon 11899422 11920336
4397 chromosome_6 5407846 5407912 scaffold1_size20154211_pilon 11920337 11920403
4398 no_match 0 0 scaffold1_size20154211_pilon 11920404 11920556
4399 chromosome_6 5408066 5408132 scaffold1_size20154211_pilon 11920557 11920623
4400 no_match 0 0 scaffold1_size20154211_pilon 11920624 11937121
4401 chromosome_8 4890550 4890880 scaffold1_size20154211_pilon 11937122 11937452
4402 no_match 0 0 scaffold1_size20154211_pilon 11937453 11945063
4403 chromosome_5 1328353 1328603 scaffold1_size20154211_pilon 11945064 11945318
4404 no_match 0 0 scaffold1_size20154211_pilon 11945319 11998938
4405 chromosome_10 1119725 1120018 scaffold1_size20154211_pilon 11998939 11999232
4406 no_match 0 0 scaffold1_size20154211_pilon 11999233 12024559
4407 chromosome_6 5303944 5238715 scaffold1_size20154211_pilon 12024560 12089748
4408 no_match 0 0 scaffold1_size20154211_pilon 12089749 12090520
4409 chromosome_6 5238809 4822744 scaffold1_size20154211_pilon 12090521 12506558
4410 no_match 0 0 scaffold1_size20154211_pilon 12506559 12541307
4411 scaffold_25 36704 37245 scaffold1_size20154211_pilon 12541308 12541860
4412 no_match 0 0 scaffold1_size20154211_pilon 12541861 12542444
4413 chromosome_4 1047494 1047992 scaffold1_size20154211_pilon 12542445 12542945
812 chromosome_17 150121 3511 scaffold1_size20154211_pilon 12542946 12689584
813 no_match 0 0 scaffold1_size20154211_pilon 12689585 12691834
814 chromosome_17 878 3507 scaffold1_size20154211_pilon 12691835 12694421
815 no_match 0 0 scaffold1_size20154211_pilon 12694422 12694484
816 chromosome_17 777 452 scaffold1_size20154211_pilon 12694485 12694801
817 no_match 0 0 scaffold1_size20154211_pilon 12694802 12705306
818 chromosome_8 45493 48915 scaffold1_size20154211_pilon 12705307 12708729
4070 chromosome_10 1135214 1124190 scaffold1_size20154211_pilon 12708730 12719753
-1 chromosome_14 1887567 1906074 scaffold1_size20154211_pilon 12719754 12738261
5878 chromosome_14 2893108 2894274 scaffold1_size20154211_pilon 12738262 12739428
5879 no_match 0 0 scaffold1_size20154211_pilon 12739429 12740295
5880 chromosome_14 2894376 2895070 scaffold1_size20154211_pilon 12740296 12740990
5881 no_match 0 0 scaffold1_size20154211_pilon 12740991 12741776
5882 chromosome_14 2838422 2844463 scaffold1_size20154211_pilon 12741777 12747804
5883 no_match 0 0 scaffold1_size20154211_pilon 12747805 12747932
5884 chromosome_14 2901959 2929752 scaffold1_size20154211_pilon 12747933 12775710
5885 no_match 0 0 scaffold1_size20154211_pilon 12775711 12775729
-1 chromosome_14 2929853 2937607 scaffold1_size20154211_pilon 12775730 12783484
5893 no_match 0 0 scaffold1_size20154211_pilon 12783485 12786207
5894 chromosome_14 3081942 3118328 scaffold1_size20154211_pilon 12786208 12822576
-1 chromosome_14 3118739 3120148 scaffold1_size20154211_pilon 12822437 12823846
4222 chromosome_7 1787450 1806289 scaffold1_size20154211_pilon 12823847 12842693
4223 chromosome_7 1805632 1941120 scaffold1_size20154211_pilon 12842227 12977700
819 chromosome_9 7955384 7954346 scaffold1_size20154211_pilon 12977701 12978743
820 no_match 0 0 scaffold1_size20154211_pilon 12978744 13000883
5561 chromosome_16 6341498 6317387 scaffold1_size20154211_pilon 13000884 13024989
5576 chromosome_16 5705608 5701840 scaffold1_size20154211_pilon 13024990 13028758
5577 no_match 0 0 scaffold1_size20154211_pilon 13028759 13045386
5578 scaffold_22 2672 2410 scaffold1_size20154211_pilon 13045387 13045649
5579 no_match 0 0 scaffold1_size20154211_pilon 13045650 13048071
-1 chromosome_16 5533894 5532726 scaffold1_size20154211_pilon 13048072 13049240
5585 no_match 0 0 scaffold1_size20154211_pilon 13049241 13054736
5586 chromosome_14 2692247 2691921 scaffold1_size20154211_pilon 13054737 13055059
5587 no_match 0 0 scaffold1_size20154211_pilon 13055060 13055330
5588 chromosome_14 2692355 2692249 scaffold1_size20154211_pilon 13055331 13055437
5589 no_match 0 0 scaffold1_size20154211_pilon 13055438 13062699
5590 chromosome_17 4293215 4293988 scaffold1_size20154211_pilon 13062700 13063484
5591 no_match 0 0 scaffold1_size20154211_pilon 13063485 13074522
5861 no_match 0 0 scaffold1_size20154211_pilon 13074523 13074600
5862 chromosome_14 2666818 2689757 scaffold1_size20154211_pilon 13074601 13097550
5863 no_match 0 0 scaffold1_size20154211_pilon 13097551 13100332
-1 chromosome_9 7805724 7789881 scaffold1_size20154211_pilon 13100333 13116176
-1 chromosome_9 7569490 7567591 scaffold1_size20154211_pilon 13116177 13118076
850 no_match 0 0 scaffold1_size20154211_pilon 13118077 13149063
851 chromosome_6 3333860 3333383 scaffold1_size20154211_pilon 13149064 13149541
852 no_match 0 0 scaffold1_size20154211_pilon 13149542 13153135
853 chromosome_1 5131722 5131815 scaffold1_size20154211_pilon 13153136 13153229
854 no_match 0 0 scaffold1_size20154211_pilon 13153230 13185595
855 chromosome_9 6958660 6850956 scaffold1_size20154211_pilon 13185596 13293292
856 no_match 0 0 scaffold1_size20154211_pilon 13293293 13293416
857 chromosome_9 6850955 6839060 scaffold1_size20154211_pilon 13293417 13305331
858 no_match 0 0 scaffold1_size20154211_pilon 13305332 13305431
859 chromosome_9 6839059 6827290 scaffold1_size20154211_pilon 13305432 13317198
860 no_match 0 0 scaffold1_size20154211_pilon 13317199 13317233
861 chromosome_9 6821837 6821113 scaffold1_size20154211_pilon 13317234 13317958
862 no_match 0 0 scaffold1_size20154211_pilon 13317959 13319936
863 chromosome_6 17945 18273 scaffold1_size20154211_pilon 13319937 13320281
864 no_match 0 0 scaffold1_size20154211_pilon 13320282 13348320
865 chromosome_9 6788518 6727764 scaffold1_size20154211_pilon 13348321 13409201
866 no_match 0 0 scaffold1_size20154211_pilon 13409202 13409250
867 chromosome_9 6727537 6705096 scaffold1_size20154211_pilon 13409251 13431683
868 no_match 0 0 scaffold1_size20154211_pilon 13431684 13435300
-1 chromosome_9 6635323 6610402 scaffold1_size20154211_pilon 13435301 13460222
1636 chromosome_2 3127945 3078322 scaffold1_size20154211_pilon 13460223 13509839
1637 no_match 0 0 scaffold1_size20154211_pilon 13509840 13510224
-1 chromosome_2 2777862 2692265 scaffold1_size20154211_pilon 13510225 13595822
-1 chromosome_9 6091394 6043873 scaffold1_size20154211_pilon 13595823 13643344
3226 no_match 0 0 scaffold1_size20154211_pilon 13643345 13643813
3227 chromosome_13 4610339 4621917 scaffold1_size20154211_pilon 13643814 13655392
3228 no_match 0 0 scaffold1_size20154211_pilon 13655393 13655475
3229 chromosome_13 4622018 4810843 scaffold1_size20154211_pilon 13655476 13844326
3230 no_match 0 0 scaffold1_size20154211_pilon 13844327 13850856
3231 chromosome_13 4818681 4846335 scaffold1_size20154211_pilon 13850857 13878509
3232 chromosome_13 4846436 4857263 scaffold1_size20154211_pilon 13878501 13889325
3233 no_match 0 0 scaffold1_size20154211_pilon 13889326 13889719
3234 chromosome_9 5601498 5601336 scaffold1_size20154211_pilon 13889720 13889882
3235 no_match 0 0 scaffold1_size20154211_pilon 13889883 13891210
3236 chromosome_13 4857187 4919832 scaffold1_size20154211_pilon 13891211 13953858
3237 chromosome_13 4919671 5036777 scaffold1_size20154211_pilon 13953733 14070838
-1 chromosome_9 5649052 5641877 scaffold1_size20154211_pilon 14070839 14078014
6022 chromosome_8 3705975 3648417 scaffold1_size20154211_pilon 14078015 14135547
931 chromosome_9 5595546 5475160 scaffold1_size20154211_pilon 14135548 14255921
932 no_match 0 0 scaffold1_size20154211_pilon 14255922 14256051
-1 chromosome_9 5466853 5466355 scaffold1_size20154211_pilon 14256052 14256550
3630 chromosome_9 4049324 4041346 scaffold1_size20154211_pilon 14256551 14264528
3631 no_match 0 0 scaffold1_size20154211_pilon 14264529 14266897
-1 chromosome_9 3999825 3993943 scaffold1_size20154211_pilon 14266898 14272780
3637 no_match 0 0 scaffold1_size20154211_pilon 14272781 14274423
3638 chromosome_12 176862 176932 scaffold1_size20154211_pilon 14274424 14274494
3639 no_match 0 0 scaffold1_size20154211_pilon 14274495 14284138
3640 chromosome_9 3834634 3806358 scaffold1_size20154211_pilon 14284139 14312381
3641 no_match 0 0 scaffold1_size20154211_pilon 14312382 14333691
3642 chromosome_9 3782776 3782882 scaffold1_size20154211_pilon 14333692 14333798
3643 no_match 0 0 scaffold1_size20154211_pilon 14333799 14335338
3644 chromosome_9 3783346 3783574 scaffold1_size20154211_pilon 14335339 14335567
3645 no_match 0 0 scaffold1_size20154211_pilon 14335568 14335661
3646 chromosome_9 3784746 3784852 scaffold1_size20154211_pilon 14335662 14335768
3647 no_match 0 0 scaffold1_size20154211_pilon 14335769 14348030
3648 chromosome_5 1312158 1312645 scaffold1_size20154211_pilon 14348031 14348521
3649 no_match 0 0 scaffold1_size20154211_pilon 14348522 14353858
3650 chromosome_9 3768218 3699078 scaffold1_size20154211_pilon 14353859 14422935
3651 no_match 0 0 scaffold1_size20154211_pilon 14422936 14422998
3652 chromosome_9 3699302 3504635 scaffold1_size20154211_pilon 14422999 14617644
-1 chromosome_9 5331792 5324004 scaffold1_size20154211_pilon 14617645 14625433
939 no_match 0 0 scaffold1_size20154211_pilon 14625434 14628311
940 chromosome_8 2742139 2741227 scaffold1_size20154211_pilon 14628312 14629214
941 no_match 0 0 scaffold1_size20154211_pilon 14629215 14629264
942 chromosome_8 2740722 2737545 scaffold1_size20154211_pilon 14629265 14632442
4276 scaffold_34 9939 30622 scaffold1_size20154211_pilon 14632443 14653120
4277 no_match 0 0 scaffold1_size20154211_pilon 14653121 14657764
4278 chromosome_7 3184476 3181056 scaffold1_size20154211_pilon 14657765 14661184
4279 no_match 0 0 scaffold1_size20154211_pilon 14661185 14665052
4280 chromosome_7 3192209 3281457 scaffold1_size20154211_pilon 14665053 14754313
4281 no_match 0 0 scaffold1_size20154211_pilon 14754314 14755301
4282 chromosome_13 1183827 1183675 scaffold1_size20154211_pilon 14755302 14755458
4283 no_match 0 0 scaffold1_size20154211_pilon 14755459 14760208
4284 chromosome_7 3284692 3324169 scaffold1_size20154211_pilon 14760209 14799691
4285 no_match 0 0 scaffold1_size20154211_pilon 14799692 14813405
4286 chromosome_7 291253 290903 scaffold1_size20154211_pilon 14813406 14813737
4287 no_match 0 0 scaffold1_size20154211_pilon 14813738 14824147
4288 chromosome_7 3342977 3408640 scaffold1_size20154211_pilon 14824148 14889830
943 no_match 0 0 scaffold1_size20154211_pilon 14889831 14903561
949 no_match 0 0 scaffold1_size20154211_pilon 14903562 14906247
950 chromosome_9 5077350 5079131 scaffold1_size20154211_pilon 14906248 14908033
951 no_match 0 0 scaffold1_size20154211_pilon 14908034 14908230
952 chromosome_9 5068117 5068772 scaffold1_size20154211_pilon 14908231 14908890
953 no_match 0 0 scaffold1_size20154211_pilon 14908891 14909380
954 chromosome_9 5067601 5068118 scaffold1_size20154211_pilon 14909381 14909899
955 no_match 0 0 scaffold1_size20154211_pilon 14909900 14913204
956 chromosome_9 5079146 5079427 scaffold1_size20154211_pilon 14913205 14913489
957 no_match 0 0 scaffold1_size20154211_pilon 14913490 14917468
958 chromosome_9 5100964 5086571 scaffold1_size20154211_pilon 14917469 14931861
959 no_match 0 0 scaffold1_size20154211_pilon 14931862 14933101
960 chromosome_9 5107717 5109502 scaffold1_size20154211_pilon 14933102 14934887
961 no_match 0 0 scaffold1_size20154211_pilon 14934888 14943514
962 chromosome_9 5077237 5074623 scaffold1_size20154211_pilon 14943515 14946130
963 no_match 0 0 scaffold1_size20154211_pilon 14946131 14949373
964 chromosome_9 5067601 5053932 scaffold1_size20154211_pilon 14949374 14963043
965 no_match 0 0 scaffold1_size20154211_pilon 14963044 14971510
-1 chromosome_12 5828821 5796661 scaffold1_size20154211_pilon 14971511 15003671
6208 chromosome_12 5669796 5445062 scaffold1_size20154211_pilon 15003672 15228402
966 chromosome_9 5053830 4963995 scaffold1_size20154211_pilon 15228403 15318223
967 no_match 0 0 scaffold1_size20154211_pilon 15318224 15318229
968 chromosome_9 4963894 4962346 scaffold1_size20154211_pilon 15318230 15319773
969 no_match 0 0 scaffold1_size20154211_pilon 15319774 15325143
970 chromosome_3 8498488 8498571 scaffold1_size20154211_pilon 15325144 15325227
971 no_match 0 0 scaffold1_size20154211_pilon 15325228 15330458
972 chromosome_9 5600088 5600008 scaffold1_size20154211_pilon 15330459 15330539
973 no_match 0 0 scaffold1_size20154211_pilon 15330540 15341212
974 chromosome_9 4907424 4904592 scaffold1_size20154211_pilon 15341213 15344034
975 no_match 0 0 scaffold1_size20154211_pilon 15344035 15344042
976 chromosome_9 4904466 4903549 scaffold1_size20154211_pilon 15344043 15344959
977 no_match 0 0 scaffold1_size20154211_pilon 15344960 15345267
978 chromosome_9 4903448 4885998 scaffold1_size20154211_pilon 15345268 15362703
979 no_match 0 0 scaffold1_size20154211_pilon 15362704 15362873
4009 chromosome_10 4198452 4060295 scaffold1_size20154211_pilon 15362874 15501044
980 chromosome_9 4886011 4863979 scaffold1_size20154211_pilon 15501045 15523071
981 no_match 0 0 scaffold1_size20154211_pilon 15523072 15523643
4233 chromosome_7 2125397 2163828 scaffold1_size20154211_pilon 15523644 15562054
4234 no_match 0 0 scaffold1_size20154211_pilon 15562055 15562083
4235 chromosome_7 2163708 2224379 scaffold1_size20154211_pilon 15562084 15622740
4236 no_match 0 0 scaffold1_size20154211_pilon 15622741 15622870
4237 chromosome_6 2219865 2220053 scaffold1_size20154211_pilon 15622871 15623053
4238 no_match 0 0 scaffold1_size20154211_pilon 15623054 15623087
4239 chromosome_7 2224480 2318624 scaffold1_size20154211_pilon 15623088 15717214
4240 no_match 0 0 scaffold1_size20154211_pilon 15717215 15765839
4241 chromosome_17 5048069 5047460 scaffold1_size20154211_pilon 15765840 15766441
4242 no_match 0 0 scaffold1_size20154211_pilon 15766442 15784729
4243 chromosome_8 1718909 1718835 scaffold1_size20154211_pilon 15784730 15784805
4244 no_match 0 0 scaffold1_size20154211_pilon 15784806 15786353
4245 chromosome_2 1643077 1643415 scaffold1_size20154211_pilon 15786354 15786692
4246 no_match 0 0 scaffold1_size20154211_pilon 15786693 15789079
4247 chromosome_7 2390637 2586958 scaffold1_size20154211_pilon 15789080 15985371
982 chromosome_9 4863982 4853489 scaffold1_size20154211_pilon 15985372 15995861
983 no_match 0 0 scaffold1_size20154211_pilon 15995862 15998121
-1 chromosome_9 4752636 4734586 scaffold1_size20154211_pilon 15998122 16016172
985 no_match 0 0 scaffold1_size20154211_pilon 16016173 16016733
986 chromosome_9 4734485 4715463 scaffold1_size20154211_pilon 16016734 16035754
987 no_match 0 0 scaffold1_size20154211_pilon 16035755 16063961
5851 chromosome_14 2195083 2347100 scaffold1_size20154211_pilon 16063962 16215929
5852 no_match 0 0 scaffold1_size20154211_pilon 16215930 16215976
5853 chromosome_14 2347201 2384350 scaffold1_size20154211_pilon 16215977 16253127
988 chromosome_9 4687336 4423681 scaffold1_size20154211_pilon 16253128 16516759
989 no_match 0 0 scaffold1_size20154211_pilon 16516760 16516769
990 chromosome_9 4423522 4320613 scaffold1_size20154211_pilon 16516770 16619660
991 no_match 0 0 scaffold1_size20154211_pilon 16619661 16619689
4383 no_match 0 0 scaffold1_size20154211_pilon 16619690 16621376
4384 chromosome_6 4735818 4736014 scaffold1_size20154211_pilon 16621377 16621573
4385 no_match 0 0 scaffold1_size20154211_pilon 16621574 16630028
4386 chromosome_6 6203936 6147415 scaffold1_size20154211_pilon 16630029 16686536
4387 no_match 0 0 scaffold1_size20154211_pilon 16686537 16686608
4388 chromosome_6 6147423 6142290 scaffold1_size20154211_pilon 16686609 16691736
4389 chromosome_6 6142189 6111927 scaffold1_size20154211_pilon 16691733 16721996
4390 no_match 0 0 scaffold1_size20154211_pilon 16721997 16722087
-1 chromosome_6 6009702 5668962 scaffold1_size20154211_pilon 16722088 17062828
5847 chromosome_14 2032277 2103849 scaffold1_size20154211_pilon 17062829 17134367
-1 chromosome_9 4192210 4191532 scaffold1_size20154211_pilon 17134368 17135046
3662 chromosome_9 3288676 3258529 scaffold1_size20154211_pilon 17135047 17165157
3663 chromosome_9 3227739 3166485 scaffold1_size20154211_pilon 17165155 17226404
3664 no_match 0 0 scaffold1_size20154211_pilon 17226405 17232059
-1 chromosome_9 3154293 3149630 scaffold1_size20154211_pilon 17232060 17236723
-1 chromosome_9 2645060 2652645 scaffold1_size20154211_pilon 17236724 17244309
-1 chromosome_13 1699689 1645430 scaffold1_size20154211_pilon 17244310 17298569
1446 chromosome_13 1459582 1255804 scaffold1_size20154211_pilon 17298570 17502326
999 chromosome_9 2645057 2585723 scaffold1_size20154211_pilon 17502327 17561632
1000 no_match 0 0 scaffold1_size20154211_pilon 17561633 17575032
-1 chromosome_9 2442687 2368618 scaffold1_size20154211_pilon 17575033 17649102
1002 no_match 0 0 scaffold1_size20154211_pilon 17649103 17709617
1003 chromosome_9 2365623 2344428 scaffold1_size20154211_pilon 17709618 17730792
1004 no_match 0 0 scaffold1_size20154211_pilon 17730793 17730916
1005 chromosome_6 4459625 4459824 scaffold1_size20154211_pilon 17730917 17731117
1006 no_match 0 0 scaffold1_size20154211_pilon 17731118 17739128
1007 chromosome_9 2317608 2289273 scaffold1_size20154211_pilon 17739129 17767453
1008 no_match 0 0 scaffold1_size20154211_pilon 17767454 17775532
-1 chromosome_9 2152684 2132968 scaffold1_size20154211_pilon 17775533 17795249
1010 no_match 0 0 scaffold1_size20154211_pilon 17795250 17796051
-1 chromosome_9 1991817 1986642 scaffold1_size20154211_pilon 17796052 17801227
1012 no_match 0 0 scaffold1_size20154211_pilon 17801228 17801366
4439 chromosome_6 4115173 3975057 scaffold1_size20154211_pilon 17801367 17941432
1013 chromosome_9 1986677 1867234 scaffold1_size20154211_pilon 17941433 18060864
1014 no_match 0 0 scaffold1_size20154211_pilon 18060865 18061039
1015 chromosome_9 1867133 1863614 scaffold1_size20154211_pilon 18061040 18064559
1016 no_match 0 0 scaffold1_size20154211_pilon 18064560 18070220
1369 no_match 6641 0 scaffold1_size20154211_pilon 18070221 18088082
1370 chromosome_13 3018775 2955957 scaffold1_size20154211_pilon 18088083 18150901
1371 no_match 0 0 scaffold1_size20154211_pilon 18150902 18156747
1372 chromosome_13 2937885 2882722 scaffold1_size20154211_pilon 18156748 18211886
3677 no_match 0 0 scaffold1_size20154211_pilon 18211887 18214442
3678 chromosome_2 6893307 6869577 scaffold1_size20154211_pilon 18214443 18238171
3679 no_match 0 0 scaffold1_size20154211_pilon 18238172 18238371
3680 chromosome_7 1640575 1640349 scaffold1_size20154211_pilon 18238372 18238602
3681 no_match 0 0 scaffold1_size20154211_pilon 18238603 18244443
3682 chromosome_2 6853432 6853769 scaffold1_size20154211_pilon 18244444 18244781
3683 no_match 0 0 scaffold1_size20154211_pilon 18244782 18260010
3684 chromosome_2 5770273 5770443 scaffold1_size20154211_pilon 18260011 18260181
3685 no_match 0 0 scaffold1_size20154211_pilon 18260182 18260439
3686 chromosome_2 5770630 5770829 scaffold1_size20154211_pilon 18260440 18260639
3687 no_match 0 0 scaffold1_size20154211_pilon 18260640 18295679
3688 chromosome_17 2052956 2053173 scaffold1_size20154211_pilon 18295680 18295900
3689 no_match 0 0 scaffold1_size20154211_pilon 18295901 18317123
-1 chromosome_2 6644672 6629093 scaffold1_size20154211_pilon 18317124 18332703
2023 no_match 0 0 scaffold1_size20154211_pilon 18332704 18333129
2024 chromosome_12 9674232 9709804 scaffold1_size20154211_pilon 18333130 18368478
2025 no_match 0 0 scaffold1_size20154211_pilon 18368479 18368593
2026 chromosome_12 9709821 9710139 scaffold1_size20154211_pilon 18368594 18368915
2027 no_match 0 0 scaffold1_size20154211_pilon 18368916 18369055
2028 chromosome_12 9710358 9712510 scaffold1_size20154211_pilon 18369056 18371182
2029 no_match 0 0 scaffold1_size20154211_pilon 18371183 18372889
2030 scaffold_35 20585 19432 scaffold1_size20154211_pilon 18372890 18374048
2031 no_match 0 0 scaffold1_size20154211_pilon 18374049 18374155
2032 chromosome_12 9715550 9718373 scaffold1_size20154211_pilon 18374156 18376971
2033 no_match 0 0 scaffold1_size20154211_pilon 18376972 18377013
2034 chromosome_12 9718869 9720404 scaffold1_size20154211_pilon 18377014 18378540
2035 no_match 0 0 scaffold1_size20154211_pilon 18378541 18378714
2036 chromosome_12 9720538 9721026 scaffold1_size20154211_pilon 18378715 18379236
2037 no_match 0 0 scaffold1_size20154211_pilon 18379237 18379385
2038 chromosome_12 9721192 9725412 scaffold1_size20154211_pilon 18379386 18383575
2039 no_match 0 0 scaffold1_size20154211_pilon 18383576 18383776
2040 chromosome_12 9725418 9728296 scaffold1_size20154211_pilon 18383777 18386645
2041 no_match 0 0 scaffold1_size20154211_pilon 18386646 18386731
2042 chromosome_12 9728617 9730733 scaffold1_size20154211_pilon 18386732 18388848
2043 no_match 0 0 scaffold1_size20154211_pilon 18388849 18396725
2044 scaffold_35 32450 24932 scaffold1_size20154211_pilon 18396726 18404276
2045 no_match 0 0 scaffold1_size20154211_pilon 18404277 18404291
2046 scaffold_35 24749 24594 scaffold1_size20154211_pilon 18404292 18404447
2047 no_match 0 0 scaffold1_size20154211_pilon 18404448 18404450
2048 scaffold_35 22241 21466 scaffold1_size20154211_pilon 18404451 18405229
2049 no_match 0 0 scaffold1_size20154211_pilon 18405230 18405231
2050 scaffold_35 21238 20652 scaffold1_size20154211_pilon 18405232 18405799
2051 no_match 0 0 scaffold1_size20154211_pilon 18405800 18408456
2052 scaffold_35 18321 18016 scaffold1_size20154211_pilon 18408457 18408775
2053 scaffold_35 16300 15897 scaffold1_size20154211_pilon 18408775 18409210
2054 no_match 0 0 scaffold1_size20154211_pilon 18409211 18409574
2055 scaffold_35 15885 15470 scaffold1_size20154211_pilon 18409575 18409990
2056 no_match 0 0 scaffold1_size20154211_pilon 18409991 18410290
2057 scaffold_35 15437 11914 scaffold1_size20154211_pilon 18410291 18413737
2058 no_match 0 0 scaffold1_size20154211_pilon 18413738 18415554
2059 scaffold_35 11576 11504 scaffold1_size20154211_pilon 18415555 18415627
2060 no_match 0 0 scaffold1_size20154211_pilon 18415628 18422076
2061 chromosome_1 1079915 1079756 scaffold1_size20154211_pilon 18422077 18422237
2062 no_match 0 0 scaffold1_size20154211_pilon 18422238 18423994
2063 scaffold_35 11495 1 scaffold1_size20154211_pilon 18423995 18435467
2064 no_match 0 0 scaffold1_size20154211_pilon 18435468 18440809
3699 chromosome_2 6534707 6444491 scaffold1_size20154211_pilon 18440810 18531030
-1 chromosome_9 1788530 1712464 scaffold1_size20154211_pilon 18531031 18607097
1358 no_match 0 0 scaffold1_size20154211_pilon 18607098 18610939
1359 chromosome_13 3213265 3209267 scaffold1_size20154211_pilon 18610940 18614938
1360 no_match 0 0 scaffold1_size20154211_pilon 18614939 18615133
1361 chromosome_13 3209268 3188254 scaffold1_size20154211_pilon 18615134 18636145
1362 no_match 0 0 scaffold1_size20154211_pilon 18636146 18636150
1363 chromosome_13 3188153 3144372 scaffold1_size20154211_pilon 18636151 18679927
-1 chromosome_13 3122450 3115103 scaffold1_size20154211_pilon 18679921 18687268
-1 chromosome_9 1609296 1564226 scaffold1_size20154211_pilon 18687269 18732339
1020 no_match 0 0 scaffold1_size20154211_pilon 18732340 18732469
-1 chromosome_9 1524438 1493242 scaffold1_size20154211_pilon 18732470 18763666
1041 no_match 0 0 scaffold1_size20154211_pilon 18763667 18770827
5596 chromosome_16 4982540 4977266 scaffold1_size20154211_pilon 18770828 18776062
5597 no_match 0 0 scaffold1_size20154211_pilon 18776063 18796879
5598 chromosome_16 4890353 4886788 scaffold1_size20154211_pilon 18796880 18800444
5599 no_match 0 0 scaffold1_size20154211_pilon 18800445 18800453
5600 chromosome_16 4886687 4847362 scaffold1_size20154211_pilon 18800454 18839780
5601 no_match 0 0 scaffold1_size20154211_pilon 18839781 18848862
5602 chromosome_16 4838152 4838270 scaffold1_size20154211_pilon 18848863 18848981
5603 no_match 0 0 scaffold1_size20154211_pilon 18848982 18852147
5604 chromosome_16 4835340 4820824 scaffold1_size20154211_pilon 18852148 18866644
5605 no_match 0 0 scaffold1_size20154211_pilon 18866645 18866646
5606 chromosome_16 4820712 4820629 scaffold1_size20154211_pilon 18866647 18866730
5607 no_match 0 0 scaffold1_size20154211_pilon 18866731 18866859
5608 chromosome_16 4820627 4809600 scaffold1_size20154211_pilon 18866860 18877887
5609 no_match 0 0 scaffold1_size20154211_pilon 18877888 18878249
5610 chromosome_16 4809499 4789973 scaffold1_size20154211_pilon 18878250 18897772
5611 no_match 0 0 scaffold1_size20154211_pilon 18897773 18899113
5612 chromosome_16 4788609 4785691 scaffold1_size20154211_pilon 18899114 18902033
5613 no_match 0 0 scaffold1_size20154211_pilon 18902034 18902085
5614 chromosome_16 4785589 4682542 scaffold1_size20154211_pilon 18902086 19005119
5615 no_match 0 0 scaffold1_size20154211_pilon 19005120 19006222
5616 chromosome_16 4682441 4590841 scaffold1_size20154211_pilon 19006223 19097808
5617 no_match 0 0 scaffold1_size20154211_pilon 19097809 19098171
5618 chromosome_16 4590868 4572284 scaffold1_size20154211_pilon 19098172 19116756
1042 chromosome_9 1072802 964907 scaffold1_size20154211_pilon 19116757 19224723
1043 chromosome_9 963631 894435 scaffold1_size20154211_pilon 19224725 19293914
1044 no_match 0 0 scaffold1_size20154211_pilon 19293915 19294095
1045 chromosome_9 894428 789652 scaffold1_size20154211_pilon 19294096 19398835
1046 no_match 0 0 scaffold1_size20154211_pilon 19398836 19399533
1047 chromosome_9 789489 733596 scaffold1_size20154211_pilon 19399534 19455423
1048 no_match 0 0 scaffold1_size20154211_pilon 19455424 19455447
1049 chromosome_9 733495 704674 scaffold1_size20154211_pilon 19455448 19484260
1050 no_match 0 0 scaffold1_size20154211_pilon 19484261 19517030
1051 chromosome_6 815820 815888 scaffold1_size20154211_pilon 19517031 19517099
1052 no_match 0 0 scaffold1_size20154211_pilon 19517100 19539153
-1 chromosome_13 2611319 2491470 scaffold1_size20154211_pilon 19539154 19659003
1053 chromosome_9 649776 499123 scaffold1_size20154211_pilon 19659004 19809613
-1 chromosome_3 8400035 8399779 scaffold10_size3638799_pilon 1 257
1110 no_match 0 0 scaffold10_size3638799_pilon 258 16554
1111 chromosome_5 1706808 1704379 scaffold10_size3638799_pilon 16555 18983
1112 no_match 0 0 scaffold10_size3638799_pilon 18984 19999
1113 chromosome_5 1633898 1616566 scaffold10_size3638799_pilon 20000 37335
1114 no_match 0 0 scaffold10_size3638799_pilon 37336 37716
5563 chromosome_16 6307806 6261171 scaffold10_size3638799_pilon 37717 84339
-1 chromosome_16 6194871 6192993 scaffold10_size3638799_pilon 84251 86129
5571 chromosome_16 6024629 5894449 scaffold10_size3638799_pilon 86130 216262
5572 chromosome_16 5894348 5826927 scaffold10_size3638799_pilon 216256 283670
5282 chromosome_12 3627863 3717303 scaffold10_size3638799_pilon 283671 373180
5283 chromosome_12 3717352 3849954 scaffold10_size3638799_pilon 373175 505785
1115 chromosome_5 1704380 1684819 scaffold10_size3638799_pilon 505786 525343
1116 no_match 0 0 scaffold10_size3638799_pilon 525344 526789
1117 chromosome_5 1614905 1613036 scaffold10_size3638799_pilon 526790 528659
1118 no_match 0 0 scaffold10_size3638799_pilon 528660 531196
1119 chromosome_5 1610112 1608655 scaffold10_size3638799_pilon 531197 532654
1120 no_match 0 0 scaffold10_size3638799_pilon 532655 534976
1121 chromosome_5 1606614 1603174 scaffold10_size3638799_pilon 534977 538413
1122 no_match 0 0 scaffold10_size3638799_pilon 538414 538539
1123 chromosome_5 1602143 1598532 scaffold10_size3638799_pilon 538540 542141
1124 no_match 0 0 scaffold10_size3638799_pilon 542142 542651
1125 chromosome_5 1598431 1585893 scaffold10_size3638799_pilon 542652 555185
1126 no_match 0 0 scaffold10_size3638799_pilon 555186 555237
1127 chromosome_5 1585271 1574550 scaffold10_size3638799_pilon 555238 565946
1128 no_match 0 0 scaffold10_size3638799_pilon 565947 566078
1683 chromosome_16 598030 770307 scaffold10_size3638799_pilon 566079 738308
1129 chromosome_5 1574449 1541635 scaffold10_size3638799_pilon 738309 771120
-1 chromosome_5 1532947 1529294 scaffold10_size3638799_pilon 771121 774774
1135 no_match 0 0 scaffold10_size3638799_pilon 774775 774791
1136 chromosome_5 1491993 1490574 scaffold10_size3638799_pilon 774792 776209
1137 no_match 0 0 scaffold10_size3638799_pilon 776210 777561
-1 chromosome_2 1462755 1455448 scaffold10_size3638799_pilon 777562 784869
3831 no_match 0 0 scaffold10_size3638799_pilon 784870 784928
3832 chromosome_2 1196898 1149698 scaffold10_size3638799_pilon 784929 832133
3833 no_match 0 0 scaffold10_size3638799_pilon 832134 874970
-1 chromosome_2 1055552 967611 scaffold10_size3638799_pilon 874971 962912
1138 chromosome_5 1489448 1481184 scaffold10_size3638799_pilon 962913 971199
1139 no_match 0 0 scaffold10_size3638799_pilon 971200 972006
1140 chromosome_5 1480132 1479532 scaffold10_size3638799_pilon 972007 972605
1141 no_match 0 0 scaffold10_size3638799_pilon 972606 974141
1142 chromosome_5 1479431 1465072 scaffold10_size3638799_pilon 974142 988494
1143 no_match 0 0 scaffold10_size3638799_pilon 988495 988565
1144 chromosome_5 1464971 1444099 scaffold10_size3638799_pilon 988566 1009443
1145 no_match 0 0 scaffold10_size3638799_pilon 1009444 1014572
364 chromosome_17 4287747 4280545 scaffold10_size3638799_pilon 1014573 1021755
5110 scaffold_21 137541 175631 scaffold10_size3638799_pilon 1021756 1059845
5111 no_match 0 0 scaffold10_size3638799_pilon 1059846 1069079
944 scaffold_30 21142 21537 scaffold10_size3638799_pilon 1069080 1069479
945 no_match 0 0 scaffold10_size3638799_pilon 1069480 1077084