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output.txt
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1 no_match 0 0 scaffold1_size20154211_pilon 1 24430
2 chromosome_3 2216158 2216068 scaffold1_size20154211_pilon 24431 24521
3 no_match 0 0 scaffold1_size20154211_pilon 24522 32919
4 chromosome_17 2183549 2183674 scaffold1_size20154211_pilon 32920 33045
5 no_match 0 0 scaffold1_size20154211_pilon 33046 45860
6 chromosome_9 5319492 5320059 scaffold1_size20154211_pilon 45861 46428
7 no_match 0 0 scaffold1_size20154211_pilon 46429 64703
8 chromosome_7 6091948 6092034 scaffold1_size20154211_pilon 64704 64790
9 no_match 0 0 scaffold1_size20154211_pilon 64791 88878
10 chromosome_10 783169 783291 scaffold1_size20154211_pilon 88879 89001
11 no_match 0 0 scaffold1_size20154211_pilon 89002 133201
-1 chromosome_3 6922006 6916907 scaffold1_size20154211_pilon 133202 138297
-1 chromosome_3 6934838 6922543 scaffold1_size20154211_pilon 138298 150589
13 no_match 0 0 scaffold1_size20154211_pilon 150590 182936
-1 chromosome_3 6953167 6949777 scaffold1_size20154211_pilon 182937 186311
-1 chromosome_3 6954206 6953625 scaffold1_size20154211_pilon 186312 186877
15 no_match 0 0 scaffold1_size20154211_pilon 186878 195168
16 chromosome_8 3050681 3050180 scaffold1_size20154211_pilon 195169 195654
17 no_match 0 0 scaffold1_size20154211_pilon 195655 211474
18 scaffold_22 99912 105641 scaffold1_size20154211_pilon 211475 217204
19 no_match 0 0 scaffold1_size20154211_pilon 217205 217322
20 chromosome_10 6576019 6575618 scaffold1_size20154211_pilon 217323 217733
21 no_match 0 0 scaffold1_size20154211_pilon 217734 229874
22 chromosome_11 1239 2083 scaffold1_size20154211_pilon 229875 230708
23 no_match 0 0 scaffold1_size20154211_pilon 230709 239933
24 chromosome_9 7787735 7788958 scaffold1_size20154211_pilon 239934 241157
25 no_match 0 0 scaffold1_size20154211_pilon 241158 242341
26 chromosome_17 566710 567373 scaffold1_size20154211_pilon 242342 243018
27 no_match 0 0 scaffold1_size20154211_pilon 243019 245578
28 chromosome_1 8033585 8019982 scaffold1_size20154211_pilon 245579 259176
29 no_match 0 0 scaffold1_size20154211_pilon 259177 265434
-1 chromosome_1 7901489 7889083 scaffold1_size20154211_pilon 265435 277863
-1 chromosome_1 7913525 7910295 scaffold1_size20154211_pilon 277864 281116
-1 chromosome_1 7925403 7915921 scaffold1_size20154211_pilon 281117 290621
-1 chromosome_1 8019982 7927127 scaffold1_size20154211_pilon 290622 383499
31 no_match 0 0 scaffold1_size20154211_pilon 383500 383816
32 chromosome_14 2590214 2590340 scaffold1_size20154211_pilon 383817 383943
33 no_match 0 0 scaffold1_size20154211_pilon 383944 384017
-1 chromosome_1 7860612 7832494 scaffold1_size20154211_pilon 384018 412130
-1 chromosome_1 7888982 7861789 scaffold1_size20154211_pilon 412131 439318
35 chromosome_1 7831393 7794290 scaffold1_size20154211_pilon 439314 476396
36 no_match 0 0 scaffold1_size20154211_pilon 476397 476459
37 chromosome_1 7791594 7772918 scaffold1_size20154211_pilon 476460 495108
38 no_match 0 0 scaffold1_size20154211_pilon 495109 507213
39 chromosome_1 7742696 7741638 scaffold1_size20154211_pilon 507214 508273
40 no_match 0 0 scaffold1_size20154211_pilon 508274 509162
41 chromosome_1 7741534 7716571 scaffold1_size20154211_pilon 509163 534116
42 no_match 0 0 scaffold1_size20154211_pilon 534117 534123
43 chromosome_1 7716470 7714960 scaffold1_size20154211_pilon 534124 535635
44 no_match 0 0 scaffold1_size20154211_pilon 535636 536324
-1 chromosome_1 7706392 7686156 scaffold1_size20154211_pilon 536325 556557
-1 chromosome_1 7714973 7707831 scaffold1_size20154211_pilon 556558 563696
46 no_match 0 0 scaffold1_size20154211_pilon 563697 564528
47 chromosome_1 7686055 7668846 scaffold1_size20154211_pilon 564529 581735
48 no_match 0 0 scaffold1_size20154211_pilon 581736 582635
-1 chromosome_1 7654181 7645122 scaffold1_size20154211_pilon 582636 591696
-1 chromosome_1 7668745 7656265 scaffold1_size20154211_pilon 591697 604178
50 chromosome_1 7645020 7637508 scaffold1_size20154211_pilon 604144 611654
51 no_match 0 0 scaffold1_size20154211_pilon 611655 611659
52 chromosome_1 7637395 7636048 scaffold1_size20154211_pilon 611660 613007
53 no_match 0 0 scaffold1_size20154211_pilon 613008 618088
-1 chromosome_1 7604375 7595382 scaffold1_size20154211_pilon 618089 627068
-1 chromosome_1 7636050 7606582 scaffold1_size20154211_pilon 627069 656523
55 no_match 0 0 scaffold1_size20154211_pilon 656524 656672
56 chromosome_1 7595246 7592883 scaffold1_size20154211_pilon 656673 659029
57 no_match 0 0 scaffold1_size20154211_pilon 659030 662329
-1 chromosome_1 7528787 7521696 scaffold1_size20154211_pilon 662330 669404
-1 chromosome_1 7535850 7531539 scaffold1_size20154211_pilon 669405 673699
-1 chromosome_1 7592782 7537258 scaffold1_size20154211_pilon 673700 729207
59 no_match 0 0 scaffold1_size20154211_pilon 729208 729321
-1 chromosome_1 7294081 7291888 scaffold1_size20154211_pilon 729322 731480
-1 chromosome_1 7305449 7295198 scaffold1_size20154211_pilon 731481 741697
-1 chromosome_1 564586 574289 scaffold1_size20154211_pilon 741698 751367
-1 chromosome_1 7342085 7306398 scaffold1_size20154211_pilon 751368 787020
-1 chromosome_1 7370950 7342998 scaffold1_size20154211_pilon 787021 814938
-1 chromosome_4 3186319 3186709 scaffold1_size20154211_pilon 814939 815298
-1 chromosome_1 7451425 7371923 scaffold1_size20154211_pilon 815299 894766
-1 chromosome_10 6331277 6330198 scaffold1_size20154211_pilon 894767 895819
-1 chromosome_1 7521595 7453426 scaffold1_size20154211_pilon 895820 963954
61 no_match 0 0 scaffold1_size20154211_pilon 963955 967689
62 chromosome_1 7287994 7286366 scaffold1_size20154211_pilon 967690 969318
63 no_match 0 0 scaffold1_size20154211_pilon 969319 971359
-1 chromosome_12 6923080 6959545 scaffold1_size20154211_pilon 971360 1007804
-1 chromosome_1 7198103 7188670 scaffold1_size20154211_pilon 1007805 1017229
-1 chromosome_10 4992678 4988810 scaffold1_size20154211_pilon 1017230 1021075
-1 chromosome_1 7239501 7199279 scaffold1_size20154211_pilon 1021076 1061289
-1 chromosome_1 7261240 7241781 scaffold1_size20154211_pilon 1061290 1080740
-1 chromosome_1 7286265 7261900 scaffold1_size20154211_pilon 1080741 1105097
65 no_match 0 0 scaffold1_size20154211_pilon 1105098 1105801
66 chromosome_1 7186606 7184297 scaffold1_size20154211_pilon 1105802 1108111
67 no_match 0 0 scaffold1_size20154211_pilon 1108112 1178766
68 chromosome_3 6782480 6786061 scaffold1_size20154211_pilon 1178767 1182348
69 no_match 0 0 scaffold1_size20154211_pilon 1182349 1199136
-1 chromosome_1 6999268 6976149 scaffold1_size20154211_pilon 1199137 1222238
-1 chromosome_1 7146564 7018719 scaffold1_size20154211_pilon 1222239 1350066
71 no_match 0 0 scaffold1_size20154211_pilon 1350067 1353567
72 chromosome_1 6961364 6964169 scaffold1_size20154211_pilon 1353568 1356318
73 no_match 0 0 scaffold1_size20154211_pilon 1356319 1362042
74 chromosome_1 6969897 6972647 scaffold1_size20154211_pilon 1362043 1364848
75 no_match 0 0 scaffold1_size20154211_pilon 1364849 1366873
76 chromosome_17 2205546 2206541 scaffold1_size20154211_pilon 1366874 1367955
77 no_match 0 0 scaffold1_size20154211_pilon 1367956 1381390
78 chromosome_6 5404195 5404131 scaffold1_size20154211_pilon 1381391 1381455
79 no_match 0 0 scaffold1_size20154211_pilon 1381456 1388630
80 chromosome_1 6919550 6919988 scaffold1_size20154211_pilon 1388631 1389065
81 no_match 0 0 scaffold1_size20154211_pilon 1389066 1406212
82 chromosome_1 6937138 6937572 scaffold1_size20154211_pilon 1406213 1406651
83 no_match 0 0 scaffold1_size20154211_pilon 1406652 1410299
84 chromosome_1 6914790 6912912 scaffold1_size20154211_pilon 1410300 1412159
85 no_match 0 0 scaffold1_size20154211_pilon 1412160 1418211
86 chromosome_6 6224709 6223144 scaffold1_size20154211_pilon 1418212 1419956
87 no_match 0 0 scaffold1_size20154211_pilon 1419957 1421775
88 chromosome_6 6223144 6218222 scaffold1_size20154211_pilon 1421776 1426633
89 no_match 0 0 scaffold1_size20154211_pilon 1426634 1431838
90 chromosome_13 3541404 3540998 scaffold1_size20154211_pilon 1431839 1432212
91 no_match 0 0 scaffold1_size20154211_pilon 1432213 1432496
92 chromosome_17 3570712 3568745 scaffold1_size20154211_pilon 1432497 1434465
93 no_match 0 0 scaffold1_size20154211_pilon 1434466 1435559
-1 chromosome_10 4552192 4514948 scaffold1_size20154211_pilon 1435560 1472799
94 chromosome_1 6880332 6721514 scaffold1_size20154211_pilon 1472800 1631605
95 chromosome_14 3596559 3593847 scaffold1_size20154211_pilon 1631603 1634315
96 no_match 0 0 scaffold1_size20154211_pilon 1634316 1650882
-1 chromosome_1 6598270 6580749 scaffold1_size20154211_pilon 1650883 1668372
-1 chromosome_1 71565 79036 scaffold1_size20154211_pilon 1668373 1675746
-1 chromosome_1 6709077 6601324 scaffold1_size20154211_pilon 1675747 1783468
98 no_match 0 0 scaffold1_size20154211_pilon 1783469 1792625
99 chromosome_1 6571601 6572762 scaffold1_size20154211_pilon 1792626 1793801
100 no_match 0 0 scaffold1_size20154211_pilon 1793802 1796968
101 chromosome_1 6575931 6577106 scaffold1_size20154211_pilon 1796969 1798130
102 no_match 0 0 scaffold1_size20154211_pilon 1798131 1802968
103 chromosome_1 6561097 6546248 scaffold1_size20154211_pilon 1802969 1817809
104 no_match 0 0 scaffold1_size20154211_pilon 1817810 1818369
105 chromosome_1 6508821 6495136 scaffold1_size20154211_pilon 1818370 1832049
106 no_match 0 0 scaffold1_size20154211_pilon 1832050 1841427
107 chromosome_1 6486369 6472885 scaffold1_size20154211_pilon 1841428 1854900
108 no_match 0 0 scaffold1_size20154211_pilon 1854901 1855571
109 chromosome_1 6472784 6462350 scaffold1_size20154211_pilon 1855572 1866009
110 no_match 0 0 scaffold1_size20154211_pilon 1866010 1871566
-1 chromosome_1 736584 740443 scaffold1_size20154211_pilon 1871567 1875418
111 chromosome_1 6462244 6442751 scaffold1_size20154211_pilon 1875419 1894916
112 no_match 0 0 scaffold1_size20154211_pilon 1894917 1897236
-1 chromosome_4 3271803 3305166 scaffold1_size20154211_pilon 1897237 1930600
-1 chromosome_5 1561986 1561176 scaffold1_size20154211_pilon 1930601 1931408
-1 chromosome_1 1066084 1067239 scaffold1_size20154211_pilon 1931409 1932565
113 chromosome_1 6436381 6264046 scaffold1_size20154211_pilon 1932566 2104860
-1 chromosome_7 2273188 2310249 scaffold1_size20154211_pilon 2104855 2141898
-1 chromosome_1 6001320 5998841 scaffold1_size20154211_pilon 2141899 2144289
-1 chromosome_1 6042799 6002905 scaffold1_size20154211_pilon 2144290 2184095
-1 chromosome_1 6132596 6043969 scaffold1_size20154211_pilon 2184096 2272634
-1 chromosome_1 6258389 6138660 scaffold1_size20154211_pilon 2272635 2392275
115 no_match 0 0 scaffold1_size20154211_pilon 2392276 2410488
116 chromosome_1 5995699 5949746 scaffold1_size20154211_pilon 2410489 2456401
117 no_match 0 0 scaffold1_size20154211_pilon 2456402 2458233
118 chromosome_1 5948998 5948364 scaffold1_size20154211_pilon 2458234 2458867
119 no_match 0 0 scaffold1_size20154211_pilon 2458868 2463540
-1 chromosome_2 7706722 7703752 scaffold1_size20154211_pilon 2463541 2466515
120 chromosome_1 5947257 5923909 scaffold1_size20154211_pilon 2466516 2489843
121 chromosome_9 3006263 3000597 scaffold1_size20154211_pilon 2489837 2495503
-1 chromosome_4 2255965 2258031 scaffold1_size20154211_pilon 2495500 2497537
122 chromosome_1 5923914 5865147 scaffold1_size20154211_pilon 2497538 2556254
123 no_match 0 0 scaffold1_size20154211_pilon 2556255 2568085
124 chromosome_1 5860284 5728071 scaffold1_size20154211_pilon 2568086 2700297
-1 chromosome_5 2668232 2710073 scaffold1_size20154211_pilon 2700242 2742068
-1 chromosome_10 4553360 4552188 scaffold1_size20154211_pilon 2742069 2743236
-1 chromosome_1 964312 967317 scaffold1_size20154211_pilon 2743237 2746183
125 chromosome_1 5728169 5416774 scaffold1_size20154211_pilon 2746184 3057578
126 no_match 0 0 scaffold1_size20154211_pilon 3057579 3084597
127 chromosome_6 503093 502570 scaffold1_size20154211_pilon 3084598 3085123
128 no_match 0 0 scaffold1_size20154211_pilon 3085124 3141513
129 chromosome_1 5332764 5228030 scaffold1_size20154211_pilon 3141514 3246271
130 no_match 0 0 scaffold1_size20154211_pilon 3246272 3246372
-1 chromosome_6 6942876 6944871 scaffold1_size20154211_pilon 3246373 3248357
-1 chromosome_6 6977535 6980198 scaffold1_size20154211_pilon 3248358 3251002
131 chromosome_1 5227926 5153786 scaffold1_size20154211_pilon 3251003 3325143
132 no_match 0 0 scaffold1_size20154211_pilon 3325144 3349370
133 chromosome_1 5129559 5115418 scaffold1_size20154211_pilon 3349371 3363542
134 no_match 0 0 scaffold1_size20154211_pilon 3363543 3363564
135 chromosome_1 5115510 5066905 scaffold1_size20154211_pilon 3363565 3412161
136 no_match 0 0 scaffold1_size20154211_pilon 3412162 3412346
137 chromosome_1 5066804 4990452 scaffold1_size20154211_pilon 3412347 3488742
138 chromosome_1 4990351 4909684 scaffold1_size20154211_pilon 3488732 3569397
139 no_match 0 0 scaffold1_size20154211_pilon 3569398 3569529
-1 chromosome_10 5550283 5548927 scaffold1_size20154211_pilon 3569530 3570889
140 chromosome_1 4909583 4857926 scaffold1_size20154211_pilon 3570890 3622518
141 no_match 0 0 scaffold1_size20154211_pilon 3622519 3622613
-1 chromosome_5 1640308 1637929 scaffold1_size20154211_pilon 3622614 3624979
142 chromosome_1 4857825 4853571 scaffold1_size20154211_pilon 3624980 3629235
143 no_match 0 0 scaffold1_size20154211_pilon 3629236 3632946
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149 chromosome_1 4396064 4291807 scaffold1_size20154211_pilon 4083436 4187685
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163 chromosome_1 3705876 3679178 scaffold1_size20154211_pilon 4836316 4862994
164 chromosome_1 3679229 3640806 scaffold1_size20154211_pilon 4862987 4901363
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175 chromosome_1 3117928 2976720 scaffold1_size20154211_pilon 5470766 5611965
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177 chromosome_9 3991919 3992450 scaffold1_size20154211_pilon 5665428 5665991
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179 chromosome_9 3993577 3993673 scaffold1_size20154211_pilon 5667149 5667245
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183 chromosome_1 2799985 2745657 scaffold1_size20154211_pilon 5809446 5863762
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185 chromosome_1 2732153 2722144 scaffold1_size20154211_pilon 5863958 5873973
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189 chromosome_1 2539326 2460047 scaffold1_size20154211_pilon 6060741 6140015
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191 chromosome_1 2459943 2310766 scaffold1_size20154211_pilon 6140124 6289287
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193 chromosome_1 2310802 2262979 scaffold1_size20154211_pilon 6289352 6337172
194 chromosome_1 2263154 2143496 scaffold1_size20154211_pilon 6337045 6456726
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196 chromosome_1 2125521 2069545 scaffold1_size20154211_pilon 6474578 6530537
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198 chromosome_1 2069444 2030600 scaffold1_size20154211_pilon 6530591 6569421
199 no_match 0 0 scaffold1_size20154211_pilon 6569422 6569531
200 chromosome_1 2030472 2029478 scaffold1_size20154211_pilon 6569532 6570525
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202 chromosome_1 2028002 2026633 scaffold1_size20154211_pilon 6572418 6573781
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204 chromosome_1 2026532 2000058 scaffold1_size20154211_pilon 6573996 6600464
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206 chromosome_4 1870220 1870293 scaffold1_size20154211_pilon 6601585 6601658
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210 chromosome_1 1982967 1967420 scaffold1_size20154211_pilon 6612246 6627797
211 no_match 0 0 scaffold1_size20154211_pilon 6627798 6628301
212 chromosome_3 2113945 2113647 scaffold1_size20154211_pilon 6628302 6628602
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214 chromosome_1 1966686 1936796 scaffold1_size20154211_pilon 6629985 6659840
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216 chromosome_6 511662 510776 scaffold1_size20154211_pilon 6663418 6664267
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218 chromosome_1 1903144 1880784 scaffold1_size20154211_pilon 6703318 6725613
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224 chromosome_1 1572064 1548254 scaffold1_size20154211_pilon 7033431 7057233
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226 chromosome_1 1547902 1546145 scaffold1_size20154211_pilon 7057625 7059382
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228 chromosome_1 1545808 1504200 scaffold1_size20154211_pilon 7061071 7102649
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230 chromosome_1 1504099 1358842 scaffold1_size20154211_pilon 7107198 7252431
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232 scaffold_25 42959 44115 scaffold1_size20154211_pilon 7262074 7263235
233 no_match 0 0 scaffold1_size20154211_pilon 7263236 7271613
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234 chromosome_1 1340620 1309629 scaffold1_size20154211_pilon 7277130 7308112
235 no_match 0 0 scaffold1_size20154211_pilon 7308113 7312249
236 chromosome_6 745584 746573 scaffold1_size20154211_pilon 7312250 7313234
237 no_match 0 0 scaffold1_size20154211_pilon 7313235 7321125
238 scaffold_38 17721 18909 scaffold1_size20154211_pilon 7321126 7322324
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241 no_match 0 0 scaffold1_size20154211_pilon 7353014 7357016
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243 no_match 0 0 scaffold1_size20154211_pilon 7378796 7380107
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245 no_match 0 0 scaffold1_size20154211_pilon 7397796 7397984
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247 no_match 0 0 scaffold1_size20154211_pilon 7401909 7406436
248 scaffold_28 43633 48658 scaffold1_size20154211_pilon 7406437 7411462
249 no_match 0 0 scaffold1_size20154211_pilon 7411463 7414598
250 scaffold_28 51013 50023 scaffold1_size20154211_pilon 7414599 7415589
251 no_match 0 0 scaffold1_size20154211_pilon 7415590 7426761
252 chromosome_3 6820178 6823896 scaffold1_size20154211_pilon 7426762 7430480
253 no_match 0 0 scaffold1_size20154211_pilon 7430481 7433947
254 chromosome_3 7096061 7099261 scaffold1_size20154211_pilon 7433948 7437148
255 no_match 0 0 scaffold1_size20154211_pilon 7437149 7437767
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256 chromosome_2 2901377 2903800 scaffold1_size20154211_pilon 7438616 7441040
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258 chromosome_1 1139244 1089946 scaffold1_size20154211_pilon 7489049 7538285
259 no_match 0 0 scaffold1_size20154211_pilon 7538286 7540025
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260 chromosome_17 6516145 6513344 scaffold1_size20154211_pilon 7541731 7544533
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263 scaffold_25 85868 102191 scaffold1_size20154211_pilon 7681390 7697714
264 no_match 0 0 scaffold1_size20154211_pilon 7697715 7700032
265 chromosome_17 804461 808006 scaffold1_size20154211_pilon 7700033 7703586
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267 chromosome_9 5937873 5940904 scaffold1_size20154211_pilon 7705145 7708171
268 no_match 0 0 scaffold1_size20154211_pilon 7708172 7710971
269 scaffold_25 31247 31971 scaffold1_size20154211_pilon 7710972 7711693
270 no_match 0 0 scaffold1_size20154211_pilon 7711694 7716303
271 chromosome_2 2651560 2656511 scaffold1_size20154211_pilon 7716304 7721254
272 no_match 0 0 scaffold1_size20154211_pilon 7721255 7721892
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273 chromosome_7 3119596 3123218 scaffold1_size20154211_pilon 7727704 7731325
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275 scaffold_28 53986 51017 scaffold1_size20154211_pilon 7731361 7734310
276 no_match 0 0 scaffold1_size20154211_pilon 7734311 7734846
277 chromosome_17 6426583 6426001 scaffold1_size20154211_pilon 7734847 7735428
278 no_match 0 0 scaffold1_size20154211_pilon 7735429 7739723
279 chromosome_1 1352989 1354765 scaffold1_size20154211_pilon 7739724 7741480
280 no_match 0 0 scaffold1_size20154211_pilon 7741481 7745429
281 chromosome_17 6376702 6376880 scaffold1_size20154211_pilon 7745430 7745608
282 no_match 0 0 scaffold1_size20154211_pilon 7745609 7747544
283 scaffold_27 44814 47793 scaffold1_size20154211_pilon 7747545 7750520
284 no_match 0 0 scaffold1_size20154211_pilon 7750521 7757706
285 chromosome_2 2666350 2667996 scaffold1_size20154211_pilon 7757707 7759349
286 no_match 0 0 scaffold1_size20154211_pilon 7759350 7767903
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288 no_match 0 0 scaffold1_size20154211_pilon 7965980 7971636
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289 chromosome_17 6216969 5994485 scaffold1_size20154211_pilon 7974269 8196711
290 no_match 0 0 scaffold1_size20154211_pilon 8196712 8202042
291 chromosome_2 1603354 1603453 scaffold1_size20154211_pilon 8202043 8202142
292 no_match 0 0 scaffold1_size20154211_pilon 8202143 8209388
293 chromosome_17 5981669 5980995 scaffold1_size20154211_pilon 8209389 8210063
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295 chromosome_6 2071428 2071500 scaffold1_size20154211_pilon 8255144 8255216
296 no_match 0 0 scaffold1_size20154211_pilon 8255217 8259318
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297 chromosome_17 5924253 5860791 scaffold1_size20154211_pilon 8260714 8324165
298 no_match 0 0 scaffold1_size20154211_pilon 8324166 8328456
299 chromosome_17 5857066 5853595 scaffold1_size20154211_pilon 8328457 8331934
300 no_match 0 0 scaffold1_size20154211_pilon 8331935 8351880
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301 chromosome_17 5833517 5789896 scaffold1_size20154211_pilon 8389901 8433510
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303 chromosome_17 5789448 5787955 scaffold1_size20154211_pilon 8434005 8435502
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305 chromosome_17 5784185 5685851 scaffold1_size20154211_pilon 8435824 8534146
306 no_match 0 0 scaffold1_size20154211_pilon 8534147 8539302
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307 chromosome_17 5682595 5559594 scaffold1_size20154211_pilon 8541382 8664319
308 no_match 0 0 scaffold1_size20154211_pilon 8664320 8674031
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310 no_match 0 0 scaffold1_size20154211_pilon 8845252 8845701
311 chromosome_17 5366572 5295519 scaffold1_size20154211_pilon 8845702 8916732
312 no_match 0 0 scaffold1_size20154211_pilon 8916733 8917329
313 chromosome_17 5295418 5273916 scaffold1_size20154211_pilon 8917330 8938815
314 chromosome_17 5273813 5249192 scaffold1_size20154211_pilon 8938784 8963316
315 no_match 0 0 scaffold1_size20154211_pilon 8963317 8963547
316 chromosome_17 5249091 5209342 scaffold1_size20154211_pilon 8963548 9003337
317 no_match 0 0 scaffold1_size20154211_pilon 9003338 9003646
318 chromosome_17 5209241 5159979 scaffold1_size20154211_pilon 9003647 9052907
319 no_match 0 0 scaffold1_size20154211_pilon 9052908 9053610
320 chromosome_17 5159878 5116571 scaffold1_size20154211_pilon 9053611 9096901
321 no_match 0 0 scaffold1_size20154211_pilon 9096902 9101129
322 chromosome_17 5113369 5112298 scaffold1_size20154211_pilon 9101130 9102201
323 no_match 0 0 scaffold1_size20154211_pilon 9102202 9102257
324 chromosome_17 5111340 5105556 scaffold1_size20154211_pilon 9102258 9108063
325 no_match 0 0 scaffold1_size20154211_pilon 9108064 9118663
326 chromosome_17 5105521 5101077 scaffold1_size20154211_pilon 9118664 9123108
327 no_match 0 0 scaffold1_size20154211_pilon 9123109 9123414
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328 chromosome_17 5100764 5096637 scaffold1_size20154211_pilon 9124300 9128427
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330 chromosome_17 5092301 5091395 scaffold1_size20154211_pilon 9133033 9133939
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332 chromosome_17 5091294 5060758 scaffold1_size20154211_pilon 9134420 9164936
333 no_match 0 0 scaffold1_size20154211_pilon 9164937 9166033
334 chromosome_12 7024377 7021781 scaffold1_size20154211_pilon 9166034 9168630
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335 no_match 0 0 scaffold1_size20154211_pilon 9169891 9194162
336 chromosome_17 4686654 4679162 scaffold1_size20154211_pilon 9194163 9201640
337 no_match 0 0 scaffold1_size20154211_pilon 9201641 9207295
338 chromosome_17 4679165 4677528 scaffold1_size20154211_pilon 9207296 9208933
339 no_match 0 0 scaffold1_size20154211_pilon 9208934 9214596
-1 chromosome_3 4775376 4779317 scaffold1_size20154211_pilon 9214597 9218517
340 chromosome_17 4677531 4664672 scaffold1_size20154211_pilon 9218518 9231375
341 no_match 0 0 scaffold1_size20154211_pilon 9231376 9231490
-1 chromosome_7 460718 464755 scaffold1_size20154211_pilon 9231491 9235503
-1 chromosome_17 6882311 6883622 scaffold1_size20154211_pilon 9235504 9236815
342 chromosome_17 4664679 4598865 scaffold1_size20154211_pilon 9236816 9302489
343 no_match 0 0 scaffold1_size20154211_pilon 9302490 9306954
344 chromosome_17 4597661 4597496 scaffold1_size20154211_pilon 9306955 9307112
345 no_match 0 0 scaffold1_size20154211_pilon 9307113 9312012
346 chromosome_17 4594153 4590315 scaffold1_size20154211_pilon 9312013 9315748
347 no_match 0 0 scaffold1_size20154211_pilon 9315749 9315864
348 chromosome_17 4590315 4514211 scaffold1_size20154211_pilon 9315865 9391915
349 no_match 0 0 scaffold1_size20154211_pilon 9391916 9398921
350 chromosome_17 4508494 4485107 scaffold1_size20154211_pilon 9398922 9422299
351 no_match 0 0 scaffold1_size20154211_pilon 9422300 9422394
-1 chromosome_13 4221408 4224481 scaffold1_size20154211_pilon 9422395 9425458
352 chromosome_17 4485107 4416878 scaffold1_size20154211_pilon 9425459 9493676
353 no_match 0 0 scaffold1_size20154211_pilon 9493677 9493930
-1 chromosome_2 8273750 8274261 scaffold1_size20154211_pilon 9493931 9494448
354 chromosome_17 4416358 4367656 scaffold1_size20154211_pilon 9494449 9543142
355 no_match 0 0 scaffold1_size20154211_pilon 9543143 9544371
-1 chromosome_12 1108212 1109757 scaffold1_size20154211_pilon 9544372 9545919
356 chromosome_17 4367662 4306257 scaffold1_size20154211_pilon 9545920 9607318
357 no_match 0 0 scaffold1_size20154211_pilon 9607319 9608456
358 chromosome_16 6525422 6532944 scaffold1_size20154211_pilon 9608457 9616018
359 no_match 0 0 scaffold1_size20154211_pilon 9616019 9622532
360 chromosome_17 4292050 4292148 scaffold1_size20154211_pilon 9622533 9622630
361 no_match 0 0 scaffold1_size20154211_pilon 9622631 9623305
362 chromosome_17 4292824 4292921 scaffold1_size20154211_pilon 9623306 9623404
363 no_match 0 0 scaffold1_size20154211_pilon 9623405 9627707
-1 chromosome_9 4034751 4032407 scaffold1_size20154211_pilon 9627708 9630051
-1 chromosome_2 4273536 4257280 scaffold1_size20154211_pilon 9630052 9646307
-1 chromosome_15 1229692 1229129 scaffold1_size20154211_pilon 9646308 9646875
-1 chromosome_10 5704325 5700529 scaffold1_size20154211_pilon 9646876 9650641
-1 chromosome_11 3799700 3814735 scaffold1_size20154211_pilon 9650642 9665631
-1 chromosome_5 1390954 1385589 scaffold1_size20154211_pilon 9665632 9670994
-1 chromosome_16 4513348 4512741 scaffold1_size20154211_pilon 9670995 9671605
-1 scaffold_22 88585 90395 scaffold1_size20154211_pilon 9671606 9673421
-1 chromosome_7 5683617 5685105 scaffold1_size20154211_pilon 9673422 9674903
-1 chromosome_6 8219054 8224419 scaffold1_size20154211_pilon 9674904 9680282
-1 chromosome_7 2070442 2072205 scaffold1_size20154211_pilon 9680283 9682025
-1 chromosome_14 2351096 2356106 scaffold1_size20154211_pilon 9682026 9687037
364 chromosome_17 4287747 4042938 scaffold1_size20154211_pilon 9687038 9931827
-1 chromosome_14 1765213 1768785 scaffold1_size20154211_pilon 9931636 9935210
365 chromosome_17 4043051 4007988 scaffold1_size20154211_pilon 9935211 9970262
366 no_match 0 0 scaffold1_size20154211_pilon 9970263 9970287
367 chromosome_17 4007698 3952824 scaffold1_size20154211_pilon 9970288 10025167
368 no_match 0 0 scaffold1_size20154211_pilon 10025168 10025286
369 chromosome_17 3952723 3920425 scaffold1_size20154211_pilon 10025287 10057587
370 no_match 0 0 scaffold1_size20154211_pilon 10057588 10070982
371 chromosome_2 562691 563270 scaffold1_size20154211_pilon 10070983 10071558
372 no_match 0 0 scaffold1_size20154211_pilon 10071559 10072740
373 chromosome_17 3907042 3907260 scaffold1_size20154211_pilon 10072741 10072959
374 no_match 0 0 scaffold1_size20154211_pilon 10072960 10085411
-1 chromosome_4 360030 356454 scaffold1_size20154211_pilon 10085412 10088969
-1 chromosome_8 2321105 2318299 scaffold1_size20154211_pilon 10088970 10091773
-1 chromosome_10 2247336 2246515 scaffold1_size20154211_pilon 10091774 10092592
-1 chromosome_12 5796421 5795744 scaffold1_size20154211_pilon 10092593 10093259
-1 chromosome_6 6079663 6077272 scaffold1_size20154211_pilon 10093260 10095601
375 chromosome_17 3894589 3728563 scaffold1_size20154211_pilon 10095602 10261616
376 no_match 0 0 scaffold1_size20154211_pilon 10261617 10331934
-1 chromosome_6 8866490 8881833 scaffold1_size20154211_pilon 10331935 10347242
-1 chromosome_10 4209002 4201947 scaffold1_size20154211_pilon 10347243 10354284
377 chromosome_7 4296423 4299446 scaffold1_size20154211_pilon 10354285 10357304
378 no_match 0 0 scaffold1_size20154211_pilon 10357305 10419100
379 chromosome_12 4112833 4112426 scaffold1_size20154211_pilon 10419101 10419503
380 no_match 0 0 scaffold1_size20154211_pilon 10419504 10420593
381 chromosome_17 3591849 3576346 scaffold1_size20154211_pilon 10420594 10436098
382 no_match 0 0 scaffold1_size20154211_pilon 10436099 10436105
-1 chromosome_8 4938581 4937846 scaffold1_size20154211_pilon 10436106 10436819
383 chromosome_17 3576234 3572607 scaffold1_size20154211_pilon 10436820 10440447
384 no_match 0 0 scaffold1_size20154211_pilon 10440448 10455706
385 chromosome_17 3568744 3491060 scaffold1_size20154211_pilon 10455707 10533403
386 no_match 0 0 scaffold1_size20154211_pilon 10533404 10533865
387 chromosome_6 1060948 1060654 scaffold1_size20154211_pilon 10533866 10534160
388 no_match 0 0 scaffold1_size20154211_pilon 10534161 10558486
389 chromosome_17 3465343 3465975 scaffold1_size20154211_pilon 10558487 10559119
390 no_match 0 0 scaffold1_size20154211_pilon 10559120 10596907
-1 chromosome_12 8748924 8741759 scaffold1_size20154211_pilon 10596908 10604079
-1 chromosome_10 4703440 4694723 scaffold1_size20154211_pilon 10604080 10612779
-1 chromosome_10 6522525 6520883 scaffold1_size20154211_pilon 10612780 10614398
-1 chromosome_3 1604628 1609361 scaffold1_size20154211_pilon 10614399 10619109
-1 chromosome_12 1887037 1894173 scaffold1_size20154211_pilon 10619110 10626236
-1 chromosome_14 592252 594605 scaffold1_size20154211_pilon 10626237 10628437
-1 chromosome_7 370916 372011 scaffold1_size20154211_pilon 10628438 10629522
-1 chromosome_2 4679597 4669329 scaffold1_size20154211_pilon 10629523 10639791
391 chromosome_17 3427550 3232449 scaffold1_size20154211_pilon 10639792 10834894
392 no_match 0 0 scaffold1_size20154211_pilon 10834895 10835560
-1 no_match -1409 0 scaffold1_size20154211_pilon 10835561 10836887
393 chromosome_17 3232451 3204902 scaffold1_size20154211_pilon 10836888 10864435
394 no_match 0 0 scaffold1_size20154211_pilon 10864436 10870091
395 chromosome_17 3204907 3180689 scaffold1_size20154211_pilon 10870092 10894310
396 no_match 0 0 scaffold1_size20154211_pilon 10894311 10894386
-1 chromosome_11 1869734 1868052 scaffold1_size20154211_pilon 10894387 10896051
397 chromosome_17 3180740 3149618 scaffold1_size20154211_pilon 10896052 10927169
398 no_match 0 0 scaffold1_size20154211_pilon 10927170 10927250
399 chromosome_17 3149644 3146402 scaffold1_size20154211_pilon 10927251 10930493
400 no_match 0 0 scaffold1_size20154211_pilon 10930494 10932691
-1 chromosome_10 4906341 4901723 scaffold1_size20154211_pilon 10932692 10937299
-1 chromosome_14 603468 610338 scaffold1_size20154211_pilon 10937300 10944017
-1 chromosome_2 2476227 2467078 scaffold1_size20154211_pilon 10944018 10953164
401 chromosome_17 3146298 3027865 scaffold1_size20154211_pilon 10953165 11071593
402 no_match 0 0 scaffold1_size20154211_pilon 11071594 11071700
-1 chromosome_17 4915090 4919177 scaffold1_size20154211_pilon 11071701 11075790
403 chromosome_17 3027888 2975036 scaffold1_size20154211_pilon 11075791 11128636
404 no_match 0 0 scaffold1_size20154211_pilon 11128637 11134188
-1 chromosome_13 813930 804953 scaffold1_size20154211_pilon 11134189 11143156
-1 chromosome_7 4528348 4529323 scaffold1_size20154211_pilon 11143157 11144070
-1 chromosome_7 4496824 4501866 scaffold1_size20154211_pilon 11144071 11149062
405 chromosome_17 2975038 2924657 scaffold1_size20154211_pilon 11149063 11199430
406 no_match 0 0 scaffold1_size20154211_pilon 11199431 11200619
407 chromosome_11 2204400 2205511 scaffold1_size20154211_pilon 11200620 11201729
408 no_match 0 0 scaffold1_size20154211_pilon 11201730 11217801
-1 chromosome_17 4980049 4981017 scaffold1_size20154211_pilon 11217802 11218762
-1 chromosome_3 8821266 8820220 scaffold1_size20154211_pilon 11218763 11219832
-1 chromosome_13 1330670 1294165 scaffold1_size20154211_pilon 11219833 11256316
409 chromosome_17 2910806 2700225 scaffold1_size20154211_pilon 11256317 11466872
410 no_match 0 0 scaffold1_size20154211_pilon 11466873 11473714
411 chromosome_17 2694741 2686987 scaffold1_size20154211_pilon 11473715 11481458
412 no_match 0 0 scaffold1_size20154211_pilon 11481459 11482223
-1 chromosome_6 2012465 2010296 scaffold1_size20154211_pilon 11482224 11484360
413 chromosome_17 2686884 2663206 scaffold1_size20154211_pilon 11484361 11508034
414 no_match 0 0 scaffold1_size20154211_pilon 11508035 11520277
-1 chromosome_13 3105839 3104308 scaffold1_size20154211_pilon 11520278 11521768
-1 chromosome_14 2095757 2099666 scaffold1_size20154211_pilon 11521769 11525644
-1 chromosome_17 2630293 2620420 scaffold1_size20154211_pilon 11525645 11535528
-1 chromosome_17 2650336 2631870 scaffold1_size20154211_pilon 11535529 11554005
416 no_match 0 0 scaffold1_size20154211_pilon 11554006 11554026
417 chromosome_17 2620319 2618753 scaffold1_size20154211_pilon 11554027 11555593
418 no_match 0 0 scaffold1_size20154211_pilon 11555594 11555750
419 chromosome_17 2618652 2605470 scaffold1_size20154211_pilon 11555751 11568929
420 no_match 0 0 scaffold1_size20154211_pilon 11568930 11569025
421 chromosome_17 2605184 2598618 scaffold1_size20154211_pilon 11569026 11575586
422 no_match 0 0 scaffold1_size20154211_pilon 11575587 11575588
-1 chromosome_14 2539827 2542231 scaffold1_size20154211_pilon 11575589 11577974
423 chromosome_17 2598517 2539847 scaffold1_size20154211_pilon 11577975 11636609
424 chromosome_17 2539721 2538705 scaffold1_size20154211_pilon 11636610 11637628
425 no_match 0 0 scaffold1_size20154211_pilon 11637629 11637911
426 chromosome_17 2538700 2525452 scaffold1_size20154211_pilon 11637912 11651152
427 no_match 0 0 scaffold1_size20154211_pilon 11651153 11651192
428 chromosome_17 2525351 2518026 scaffold1_size20154211_pilon 11651193 11658517
429 no_match 0 0 scaffold1_size20154211_pilon 11658518 11658768
-1 chromosome_2 8868586 8866445 scaffold1_size20154211_pilon 11658769 11660899
430 chromosome_17 2518038 2365872 scaffold1_size20154211_pilon 11660900 11813045
431 no_match 0 0 scaffold1_size20154211_pilon 11813046 11813121
432 chromosome_17 2365894 2236798 scaffold1_size20154211_pilon 11813122 11942249
433 no_match 0 0 scaffold1_size20154211_pilon 11942250 11977247
434 chromosome_17 2201495 2202450 scaffold1_size20154211_pilon 11977248 11978250
435 no_match 0 0 scaffold1_size20154211_pilon 11978251 11978870
436 chromosome_17 2203071 2204073 scaffold1_size20154211_pilon 11978871 11979826
437 no_match 0 0 scaffold1_size20154211_pilon 11979827 11995436
438 chromosome_11 2273987 2274188 scaffold1_size20154211_pilon 11995437 11995638
439 no_match 0 0 scaffold1_size20154211_pilon 11995639 12003903
440 chromosome_17 2177408 2103949 scaffold1_size20154211_pilon 12003904 12077338
441 no_match 0 0 scaffold1_size20154211_pilon 12077339 12079359
442 chromosome_17 2101532 2055260 scaffold1_size20154211_pilon 12079360 12125611
443 no_match 0 0 scaffold1_size20154211_pilon 12125612 12137569
444 chromosome_2 4899459 4899809 scaffold1_size20154211_pilon 12137570 12137920
445 no_match 0 0 scaffold1_size20154211_pilon 12137921 12140922
446 chromosome_3 8532262 8532149 scaffold1_size20154211_pilon 12140923 12141036
447 no_match 0 0 scaffold1_size20154211_pilon 12141037 12148272
448 chromosome_17 2043379 2043627 scaffold1_size20154211_pilon 12148273 12148521
449 no_match 0 0 scaffold1_size20154211_pilon 12148522 12165557
450 chromosome_17 294695 296999 scaffold1_size20154211_pilon 12165558 12167849
451 no_match 0 0 scaffold1_size20154211_pilon 12167850 12169287
452 chromosome_17 2013422 1972853 scaffold1_size20154211_pilon 12169288 12209849
453 no_match 0 0 scaffold1_size20154211_pilon 12209850 12210118
454 chromosome_17 1972870 1865512 scaffold1_size20154211_pilon 12210119 12317484
-1 chromosome_2 8803877 8803126 scaffold1_size20154211_pilon 12317476 12318214
455 chromosome_17 1865560 1835731 scaffold1_size20154211_pilon 12318215 12348040
456 no_match 0 0 scaffold1_size20154211_pilon 12348041 12348314
457 chromosome_17 1835713 1815011 scaffold1_size20154211_pilon 12348315 12369016
458 no_match 0 0 scaffold1_size20154211_pilon 12369017 12369083
459 chromosome_17 1815017 1774577 scaffold1_size20154211_pilon 12369084 12409519
460 no_match 0 0 scaffold1_size20154211_pilon 12409520 12410650
-1 chromosome_10 218633 215934 scaffold1_size20154211_pilon 12410651 12413300
461 chromosome_17 1774600 1715959 scaffold1_size20154211_pilon 12413301 12471942
462 no_match 0 0 scaffold1_size20154211_pilon 12471943 12477599
463 chromosome_17 1715964 1640920 scaffold1_size20154211_pilon 12477600 12552675
464 no_match 0 0 scaffold1_size20154211_pilon 12552676 12601841
-1 chromosome_2 4743615 4702465 scaffold1_size20154211_pilon 12601842 12642992
-1 chromosome_3 4628007 4630475 scaffold1_size20154211_pilon 12642993 12645443
-1 chromosome_7 3218730 3220739 scaffold1_size20154211_pilon 12645444 12647465
-1 chromosome_3 7892762 7897909 scaffold1_size20154211_pilon 12647466 12652598
-1 chromosome_7 3058753 3060494 scaffold1_size20154211_pilon 12652599 12654310
-1 chromosome_11 1782606 1777161 scaffold1_size20154211_pilon 12654311 12659738
-1 chromosome_4 2895690 2900087 scaffold1_size20154211_pilon 12659739 12664033
465 chromosome_17 1569600 1470067 scaffold1_size20154211_pilon 12664034 12763554
466 no_match 0 0 scaffold1_size20154211_pilon 12763555 12763835
-1 chromosome_4 2481552 2489197 scaffold1_size20154211_pilon 12763836 12771451
467 chromosome_17 1469966 1433565 scaffold1_size20154211_pilon 12771452 12807962
468 chromosome_17 1433409 1433226 scaffold1_size20154211_pilon 12807962 12808148
469 no_match 0 0 scaffold1_size20154211_pilon 12808149 12808653
470 chromosome_17 1432764 1431432 scaffold1_size20154211_pilon 12808654 12810091
471 no_match 0 0 scaffold1_size20154211_pilon 12810092 12810184
472 chromosome_17 1431237 1425679 scaffold1_size20154211_pilon 12810185 12815770
473 chromosome_17 1425559 1417135 scaffold1_size20154211_pilon 12815771 12824162
474 no_match 0 0 scaffold1_size20154211_pilon 12824163 12824344
475 chromosome_17 1417090 1414444 scaffold1_size20154211_pilon 12824345 12826954
476 no_match 0 0 scaffold1_size20154211_pilon 12826955 12826975
477 chromosome_17 1414350 1408583 scaffold1_size20154211_pilon 12826976 12832609
478 no_match 0 0 scaffold1_size20154211_pilon 12832610 12834244
479 chromosome_17 1407065 1404833 scaffold1_size20154211_pilon 12834245 12836485
480 no_match 0 0 scaffold1_size20154211_pilon 12836486 12838405
481 chromosome_17 1403102 1389514 scaffold1_size20154211_pilon 12838406 12852145
482 no_match 0 0 scaffold1_size20154211_pilon 12852146 12852535
483 chromosome_17 1388617 1387695 scaffold1_size20154211_pilon 12852536 12853416
484 no_match 0 0 scaffold1_size20154211_pilon 12853417 12853840
485 chromosome_17 1387518 1386500 scaffold1_size20154211_pilon 12853841 12854879
486 no_match 0 0 scaffold1_size20154211_pilon 12854880 12855010
487 chromosome_17 1386348 1383666 scaffold1_size20154211_pilon 12855011 12857711
488 no_match 0 0 scaffold1_size20154211_pilon 12857712 12857886
489 chromosome_17 1383597 1383354 scaffold1_size20154211_pilon 12857887 12858128
490 no_match 0 0 scaffold1_size20154211_pilon 12858129 12858130
491 chromosome_17 1383252 1380914 scaffold1_size20154211_pilon 12858131 12860428
492 no_match 0 0 scaffold1_size20154211_pilon 12860429 12860430
493 chromosome_17 1380783 1377391 scaffold1_size20154211_pilon 12860431 12863783
494 no_match 0 0 scaffold1_size20154211_pilon 12863784 12864562
495 chromosome_17 1377344 1376608 scaffold1_size20154211_pilon 12864563 12865255
496 no_match 0 0 scaffold1_size20154211_pilon 12865256 12865386
497 chromosome_17 1376507 1375641 scaffold1_size20154211_pilon 12865387 12866274
498 no_match 0 0 scaffold1_size20154211_pilon 12866275 12866620
499 chromosome_17 1375510 1370050 scaffold1_size20154211_pilon 12866621 12872145
500 no_match 0 0 scaffold1_size20154211_pilon 12872146 12872383
501 chromosome_17 1370012 1367984 scaffold1_size20154211_pilon 12872384 12874417
502 no_match 0 0 scaffold1_size20154211_pilon 12874418 12874575
503 chromosome_17 1367788 1360669 scaffold1_size20154211_pilon 12874576 12881677
504 no_match 0 0 scaffold1_size20154211_pilon 12881678 12882090
505 chromosome_17 1360671 1351216 scaffold1_size20154211_pilon 12882091 12891595
506 chromosome_17 1350545 1333788 scaffold1_size20154211_pilon 12891597 12908507
507 chromosome_17 1333698 1329301 scaffold1_size20154211_pilon 12908507 12912875
508 no_match 0 0 scaffold1_size20154211_pilon 12912876 12926061
509 chromosome_17 1313255 1312874 scaffold1_size20154211_pilon 12926062 12926444
510 no_match 0 0 scaffold1_size20154211_pilon 12926445 12935975
511 chromosome_17 1310976 1277029 scaffold1_size20154211_pilon 12935976 12970018
512 no_match 0 0 scaffold1_size20154211_pilon 12970019 12970088
513 chromosome_17 1276928 1264297 scaffold1_size20154211_pilon 12970089 12982724
514 no_match 0 0 scaffold1_size20154211_pilon 12982725 12982762
515 chromosome_17 1264146 1256545 scaffold1_size20154211_pilon 12982763 12990292
516 no_match 0 0 scaffold1_size20154211_pilon 12990293 12990442
517 chromosome_17 1256057 1252079 scaffold1_size20154211_pilon 12990443 12994465
518 no_match 0 0 scaffold1_size20154211_pilon 12994466 12995428
519 chromosome_17 1251404 1245968 scaffold1_size20154211_pilon 12995429 13000874
520 no_match 0 0 scaffold1_size20154211_pilon 13000875 13001020
521 chromosome_17 1245966 1243176 scaffold1_size20154211_pilon 13001021 13003792
522 no_match 0 0 scaffold1_size20154211_pilon 13003793 13005895
523 chromosome_17 1240660 1237304 scaffold1_size20154211_pilon 13005896 13009254
524 no_match 0 0 scaffold1_size20154211_pilon 13009255 13009259
525 chromosome_17 1237171 1234209 scaffold1_size20154211_pilon 13009260 13012220
526 chromosome_17 1233806 1224475 scaffold1_size20154211_pilon 13012220 13021701
527 no_match 0 0 scaffold1_size20154211_pilon 13021702 13025016
528 chromosome_17 1223943 1223310 scaffold1_size20154211_pilon 13025017 13025652
529 no_match 0 0 scaffold1_size20154211_pilon 13025653 13026059
530 chromosome_17 1223097 1219908 scaffold1_size20154211_pilon 13026060 13029222
531 chromosome_17 1219705 1209645 scaffold1_size20154211_pilon 13029215 13039227
532 no_match 0 0 scaffold1_size20154211_pilon 13039228 13039238
533 chromosome_17 1209428 1176508 scaffold1_size20154211_pilon 13039239 13072123
534 no_match 0 0 scaffold1_size20154211_pilon 13072124 13072468
-1 chromosome_2 2048920 2046550 scaffold1_size20154211_pilon 13072469 13074843
535 chromosome_17 1176502 1167610 scaffold1_size20154211_pilon 13074844 13083755
536 no_match 0 0 scaffold1_size20154211_pilon 13083756 13086029
537 scaffold_30 18751 20973 scaffold1_size20154211_pilon 13086030 13088265
538 chromosome_17 1167575 1167034 scaffold1_size20154211_pilon 13088266 13088811
539 no_match 0 0 scaffold1_size20154211_pilon 13088812 13088882
540 chromosome_17 1166670 1138529 scaffold1_size20154211_pilon 13088883 13116863
541 no_match 0 0 scaffold1_size20154211_pilon 13116864 13116977
-1 chromosome_12 8212686 8178367 scaffold1_size20154211_pilon 13116978 13151280
542 chromosome_17 1138517 1129897 scaffold1_size20154211_pilon 13151281 13159847
543 no_match 0 0 scaffold1_size20154211_pilon 13159848 13159941
544 chromosome_17 1129897 1127810 scaffold1_size20154211_pilon 13159942 13162023
545 no_match 0 0 scaffold1_size20154211_pilon 13162024 13163681
546 chromosome_4 2987673 3000996 scaffold1_size20154211_pilon 13163682 13176990
547 chromosome_17 1126999 1109312 scaffold1_size20154211_pilon 13176990 13194573
548 no_match 0 0 scaffold1_size20154211_pilon 13194574 13194841
549 chromosome_17 1108208 1103566 scaffold1_size20154211_pilon 13194842 13199513
550 no_match 0 0 scaffold1_size20154211_pilon 13199514 13200694
551 chromosome_17 1102085 1096457 scaffold1_size20154211_pilon 13200695 13206236
552 no_match 0 0 scaffold1_size20154211_pilon 13206237 13208092
553 chromosome_6 159054 157489 scaffold1_size20154211_pilon 13208093 13209667
554 no_match 0 0 scaffold1_size20154211_pilon 13209668 13211074
555 chromosome_17 1090800 1090522 scaffold1_size20154211_pilon 13211075 13211357
556 no_match 0 0 scaffold1_size20154211_pilon 13211358 13211635
557 chromosome_17 1090491 1084898 scaffold1_size20154211_pilon 13211636 13217170
558 chromosome_17 1084678 1071969 scaffold1_size20154211_pilon 13217171 13229879
559 chromosome_17 1071841 1063105 scaffold1_size20154211_pilon 13229879 13238716
560 no_match 0 0 scaffold1_size20154211_pilon 13238717 13238811
561 chromosome_17 1062960 1060502 scaffold1_size20154211_pilon 13238812 13241212
562 no_match 0 0 scaffold1_size20154211_pilon 13241213 13244630
563 chromosome_17 1057436 1052011 scaffold1_size20154211_pilon 13244631 13250019
564 no_match 0 0 scaffold1_size20154211_pilon 13250020 13250888
565 chromosome_17 1052021 1048532 scaffold1_size20154211_pilon 13250889 13254374
566 no_match 0 0 scaffold1_size20154211_pilon 13254375 13256144
567 chromosome_17 1047267 1046237 scaffold1_size20154211_pilon 13256145 13257147
568 no_match 0 0 scaffold1_size20154211_pilon 13257148 13257587
569 chromosome_17 1045850 1045648 scaffold1_size20154211_pilon 13257588 13257787
570 no_match 0 0 scaffold1_size20154211_pilon 13257788 13258281
571 chromosome_17 1044967 1037732 scaffold1_size20154211_pilon 13258282 13265518
572 no_match 0 0 scaffold1_size20154211_pilon 13265519 13267583
573 chromosome_17 1036776 1034002 scaffold1_size20154211_pilon 13267584 13270346
574 no_match 0 0 scaffold1_size20154211_pilon 13270347 13272154
575 chromosome_17 1033353 1032411 scaffold1_size20154211_pilon 13272155 13273111
576 no_match 0 0 scaffold1_size20154211_pilon 13273112 13275600
577 chromosome_17 1030394 1028377 scaffold1_size20154211_pilon 13275601 13277619
578 no_match 0 0 scaffold1_size20154211_pilon 13277620 13278941
579 chromosome_17 1028377 1022391 scaffold1_size20154211_pilon 13278942 13284927
580 no_match 0 0 scaffold1_size20154211_pilon 13284928 13284929
581 chromosome_17 1022308 1011774 scaffold1_size20154211_pilon 13284930 13295414
582 no_match 0 0 scaffold1_size20154211_pilon 13295415 13296874
583 chromosome_17 999430 997968 scaffold1_size20154211_pilon 13296875 13298430
584 no_match 0 0 scaffold1_size20154211_pilon 13298431 13298583
585 chromosome_17 997960 997656 scaffold1_size20154211_pilon 13298584 13298878
586 no_match 0 0 scaffold1_size20154211_pilon 13298879 13299035
587 chromosome_17 997564 996716 scaffold1_size20154211_pilon 13299036 13299872
588 no_match 0 0 scaffold1_size20154211_pilon 13299873 13299948
589 chromosome_17 996511 993223 scaffold1_size20154211_pilon 13299949 13303238
590 no_match 0 0 scaffold1_size20154211_pilon 13303239 13304689
591 chromosome_17 991978 990439 scaffold1_size20154211_pilon 13304690 13306338
592 chromosome_17 989946 988299 scaffold1_size20154211_pilon 13306332 13307913
593 no_match 0 0 scaffold1_size20154211_pilon 13307914 13307919
594 chromosome_17 987732 987470 scaffold1_size20154211_pilon 13307920 13308183
595 no_match 0 0 scaffold1_size20154211_pilon 13308184 13308329
596 chromosome_17 987095 986551 scaffold1_size20154211_pilon 13308330 13308933
597 no_match 0 0 scaffold1_size20154211_pilon 13308934 13309038
598 chromosome_17 986413 985436 scaffold1_size20154211_pilon 13309039 13310049
599 chromosome_17 964636 963790 scaffold1_size20154211_pilon 13310047 13310933
600 no_match 0 0 scaffold1_size20154211_pilon 13310934 13311100
601 chromosome_17 963684 963109 scaffold1_size20154211_pilon 13311101 13311663
602 no_match 0 0 scaffold1_size20154211_pilon 13311664 13311804
603 chromosome_17 963073 961506 scaffold1_size20154211_pilon 13311805 13313346
604 no_match 0 0 scaffold1_size20154211_pilon 13313347 13313569
605 chromosome_17 961243 961093 scaffold1_size20154211_pilon 13313570 13313719
606 no_match 0 0 scaffold1_size20154211_pilon 13313720 13313822
607 chromosome_17 961056 960495 scaffold1_size20154211_pilon 13313823 13314447
608 no_match 0 0 scaffold1_size20154211_pilon 13314448 13314836
609 chromosome_17 960332 958888 scaffold1_size20154211_pilon 13314837 13316366
610 no_match 0 0 scaffold1_size20154211_pilon 13316367 13316676
611 chromosome_17 956597 951407 scaffold1_size20154211_pilon 13316677 13321845
612 no_match 0 0 scaffold1_size20154211_pilon 13321846 13322202
613 chromosome_17 951017 948240 scaffold1_size20154211_pilon 13322203 13325098
614 no_match 0 0 scaffold1_size20154211_pilon 13325099 13328606
615 chromosome_17 947428 931452 scaffold1_size20154211_pilon 13328607 13344483
616 no_match 0 0 scaffold1_size20154211_pilon 13344484 13344490
617 chromosome_17 930596 926092 scaffold1_size20154211_pilon 13344491 13348959
618 no_match 0 0 scaffold1_size20154211_pilon 13348960 13349234
619 chromosome_17 925978 924971 scaffold1_size20154211_pilon 13349235 13350252
620 no_match 0 0 scaffold1_size20154211_pilon 13350253 13350733
621 chromosome_17 924620 923445 scaffold1_size20154211_pilon 13350734 13352039
622 no_match 0 0 scaffold1_size20154211_pilon 13352040 13352183
623 chromosome_17 923376 916826 scaffold1_size20154211_pilon 13352184 13358621
624 no_match 0 0 scaffold1_size20154211_pilon 13358622 13358778
625 chromosome_17 916758 915996 scaffold1_size20154211_pilon 13358779 13359542
626 no_match 0 0 scaffold1_size20154211_pilon 13359543 13359661
627 chromosome_17 915996 914831 scaffold1_size20154211_pilon 13359662 13360767
628 no_match 0 0 scaffold1_size20154211_pilon 13360768 13360954
629 chromosome_17 914537 913833 scaffold1_size20154211_pilon 13360955 13361657
630 no_match 0 0 scaffold1_size20154211_pilon 13361658 13361856
631 chromosome_17 913735 913576 scaffold1_size20154211_pilon 13361857 13362014
632 no_match 0 0 scaffold1_size20154211_pilon 13362015 13362127
633 chromosome_17 912683 911614 scaffold1_size20154211_pilon 13362128 13363211
634 no_match 0 0 scaffold1_size20154211_pilon 13363212 13363392
635 chromosome_17 910833 909512 scaffold1_size20154211_pilon 13363393 13364710
636 no_match 0 0 scaffold1_size20154211_pilon 13364711 13365105
637 chromosome_17 909082 901792 scaffold1_size20154211_pilon 13365106 13372245
638 no_match 0 0 scaffold1_size20154211_pilon 13372246 13373278
639 chromosome_17 901553 899113 scaffold1_size20154211_pilon 13373279 13375676
640 no_match 0 0 scaffold1_size20154211_pilon 13375677 13375978
641 chromosome_17 898917 895260 scaffold1_size20154211_pilon 13375979 13379484
642 no_match 0 0 scaffold1_size20154211_pilon 13379485 13380379
643 chromosome_17 893561 888387 scaffold1_size20154211_pilon 13380380 13385413
644 no_match 0 0 scaffold1_size20154211_pilon 13385414 13385668
645 chromosome_17 888104 884029 scaffold1_size20154211_pilon 13385669 13389740
646 no_match 0 0 scaffold1_size20154211_pilon 13389741 13389843
647 chromosome_17 884027 880510 scaffold1_size20154211_pilon 13389844 13393387
648 no_match 0 0 scaffold1_size20154211_pilon 13393388 13393392
649 chromosome_17 880409 860036 scaffold1_size20154211_pilon 13393393 13413742
650 no_match 0 0 scaffold1_size20154211_pilon 13413743 13414579
651 chromosome_17 860033 859466 scaffold1_size20154211_pilon 13414580 13415125
652 no_match 0 0 scaffold1_size20154211_pilon 13415126 13419723
653 chromosome_17 859440 858623 scaffold1_size20154211_pilon 13419724 13420514
654 no_match 0 0 scaffold1_size20154211_pilon 13420515 13420765
655 chromosome_17 858411 857016 scaffold1_size20154211_pilon 13420766 13422168
656 no_match 0 0 scaffold1_size20154211_pilon 13422169 13422266
657 chromosome_17 856990 848327 scaffold1_size20154211_pilon 13422267 13430938
658 chromosome_17 848196 840907 scaffold1_size20154211_pilon 13430940 13438358
659 no_match 0 0 scaffold1_size20154211_pilon 13438359 13438618
660 chromosome_17 840677 836069 scaffold1_size20154211_pilon 13438619 13443200
661 no_match 0 0 scaffold1_size20154211_pilon 13443201 13445375
662 chromosome_17 833934 829123 scaffold1_size20154211_pilon 13445376 13450219
663 no_match 0 0 scaffold1_size20154211_pilon 13450220 13451259
664 chromosome_17 829090 826655 scaffold1_size20154211_pilon 13451260 13453694
665 no_match 0 0 scaffold1_size20154211_pilon 13453695 13461572
666 chromosome_17 826248 822817 scaffold1_size20154211_pilon 13461573 13464977
667 chromosome_17 797532 788090 scaffold1_size20154211_pilon 13464974 13474375
668 no_match 0 0 scaffold1_size20154211_pilon 13474376 13479048
669 chromosome_17 786680 762108 scaffold1_size20154211_pilon 13479049 13503450
-1 chromosome_14 3004541 3036136 scaffold1_size20154211_pilon 13503448 13535045
670 chromosome_17 758747 742866 scaffold1_size20154211_pilon 13535046 13551115
671 no_match 0 0 scaffold1_size20154211_pilon 13551116 13551327
672 chromosome_17 742837 735098 scaffold1_size20154211_pilon 13551328 13558997
673 no_match 0 0 scaffold1_size20154211_pilon 13558998 13563109
674 chromosome_17 730527 724757 scaffold1_size20154211_pilon 13563110 13568952
675 no_match 0 0 scaffold1_size20154211_pilon 13568953 13570545
676 chromosome_17 723528 722765 scaffold1_size20154211_pilon 13570546 13571313
677 no_match 0 0 scaffold1_size20154211_pilon 13571314 13571568
678 chromosome_17 722517 722352 scaffold1_size20154211_pilon 13571569 13571735
679 no_match 0 0 scaffold1_size20154211_pilon 13571736 13571755
680 chromosome_17 722118 698496 scaffold1_size20154211_pilon 13571756 13595356
681 no_match 0 0 scaffold1_size20154211_pilon 13595357 13595502
682 chromosome_17 698272 697027 scaffold1_size20154211_pilon 13595503 13596661
683 no_match 0 0 scaffold1_size20154211_pilon 13596662 13601378
684 chromosome_17 692401 672140 scaffold1_size20154211_pilon 13601379 13621523
685 no_match 0 0 scaffold1_size20154211_pilon 13621524 13633794
686 chromosome_17 664062 642369 scaffold1_size20154211_pilon 13633795 13655556
687 no_match 0 0 scaffold1_size20154211_pilon 13655557 13655663
688 chromosome_17 637281 626380 scaffold1_size20154211_pilon 13655664 13666543
689 no_match 0 0 scaffold1_size20154211_pilon 13666544 13667477
690 chromosome_17 623972 618692 scaffold1_size20154211_pilon 13667478 13672794
691 no_match 0 0 scaffold1_size20154211_pilon 13672795 13672890
692 chromosome_17 618227 609303 scaffold1_size20154211_pilon 13672891 13681884
693 no_match 0 0 scaffold1_size20154211_pilon 13681885 13681954
694 chromosome_17 609122 605275 scaffold1_size20154211_pilon 13681955 13685816
695 no_match 0 0 scaffold1_size20154211_pilon 13685817 13685908
696 chromosome_17 605275 600566 scaffold1_size20154211_pilon 13685909 13690692
697 no_match 0 0 scaffold1_size20154211_pilon 13690693 13695480
698 chromosome_17 595467 592386 scaffold1_size20154211_pilon 13695481 13698584
699 chromosome_17 592280 591138 scaffold1_size20154211_pilon 13698584 13699642
700 chromosome_17 589818 585240 scaffold1_size20154211_pilon 13699643 13704269
-1 chromosome_12 258982 264125 scaffold1_size20154211_pilon 13704262 13709402
-1 chromosome_12 296585 299156 scaffold1_size20154211_pilon 13709403 13711959
701 chromosome_17 582153 572745 scaffold1_size20154211_pilon 13711960 13721232
702 no_match 0 0 scaffold1_size20154211_pilon 13721233 13721412
703 chromosome_17 572434 567407 scaffold1_size20154211_pilon 13721413 13726513
704 no_match 0 0 scaffold1_size20154211_pilon 13726514 13726574
705 chromosome_17 566710 566571 scaffold1_size20154211_pilon 13726575 13726715
706 no_match 0 0 scaffold1_size20154211_pilon 13726716 13726731
707 chromosome_17 566391 565838 scaffold1_size20154211_pilon 13726732 13727295
708 no_match 0 0 scaffold1_size20154211_pilon 13727296 13728047
709 chromosome_17 565842 557726 scaffold1_size20154211_pilon 13728048 13736187
710 no_match 0 0 scaffold1_size20154211_pilon 13736188 13745350
711 chromosome_12 6221109 6221259 scaffold1_size20154211_pilon 13745351 13745510
712 no_match 0 0 scaffold1_size20154211_pilon 13745511 13745546
713 chromosome_17 557688 550569 scaffold1_size20154211_pilon 13745547 13752653
714 no_match 0 0 scaffold1_size20154211_pilon 13752654 13752877
715 chromosome_17 550017 536487 scaffold1_size20154211_pilon 13752878 13766491
716 no_match 0 0 scaffold1_size20154211_pilon 13766492 13766525
717 chromosome_17 536321 531934 scaffold1_size20154211_pilon 13766526 13770850
718 no_match 0 0 scaffold1_size20154211_pilon 13770851 13770862
719 chromosome_17 531414 525867 scaffold1_size20154211_pilon 13770863 13776419
720 chromosome_17 525410 517081 scaffold1_size20154211_pilon 13776412 13784695
721 no_match 0 0 scaffold1_size20154211_pilon 13784696 13785125
722 chromosome_17 516042 512827 scaffold1_size20154211_pilon 13785126 13788329
723 no_match 0 0 scaffold1_size20154211_pilon 13788330 13788462
724 chromosome_17 512676 503674 scaffold1_size20154211_pilon 13788463 13797475
725 no_match 0 0 scaffold1_size20154211_pilon 13797476 13797775
726 chromosome_17 503513 489499 scaffold1_size20154211_pilon 13797776 13811884
727 no_match 0 0 scaffold1_size20154211_pilon 13811885 13811894
728 chromosome_17 489090 480946 scaffold1_size20154211_pilon 13811895 13820074
729 no_match 0 0 scaffold1_size20154211_pilon 13820075 13820091
730 chromosome_17 480780 475151 scaffold1_size20154211_pilon 13820092 13825726
731 no_match 0 0 scaffold1_size20154211_pilon 13825727 13826069
732 chromosome_17 474778 466148 scaffold1_size20154211_pilon 13826070 13834665
733 no_match 0 0 scaffold1_size20154211_pilon 13834666 13834750
734 chromosome_17 465964 459790 scaffold1_size20154211_pilon 13834751 13840887
735 chromosome_17 459685 450579 scaffold1_size20154211_pilon 13840887 13850184
736 no_match 0 0 scaffold1_size20154211_pilon 13850185 13850675
737 chromosome_17 450174 448581 scaffold1_size20154211_pilon 13850676 13852324
738 no_match 0 0 scaffold1_size20154211_pilon 13852325 13852538
739 chromosome_17 448572 446099 scaffold1_size20154211_pilon 13852539 13855118
740 no_match 0 0 scaffold1_size20154211_pilon 13855119 13855295
741 chromosome_17 445946 445808 scaffold1_size20154211_pilon 13855296 13855434
742 no_match 0 0 scaffold1_size20154211_pilon 13855435 13855554
743 chromosome_17 445633 443694 scaffold1_size20154211_pilon 13855555 13857408
744 no_match 0 0 scaffold1_size20154211_pilon 13857409 13857566
745 chromosome_17 443694 443287 scaffold1_size20154211_pilon 13857567 13857943
746 no_match 0 0 scaffold1_size20154211_pilon 13857944 13858711
747 chromosome_17 442632 440281 scaffold1_size20154211_pilon 13858712 13861092
748 chromosome_17 439519 432785 scaffold1_size20154211_pilon 13861093 13867960
749 no_match 0 0 scaffold1_size20154211_pilon 13867961 13868023
750 chromosome_17 432626 420191 scaffold1_size20154211_pilon 13868024 13880467
751 no_match 0 0 scaffold1_size20154211_pilon 13880468 13889064
752 chromosome_17 412828 412300 scaffold1_size20154211_pilon 13889065 13889604
753 no_match 0 0 scaffold1_size20154211_pilon 13889605 13889697
754 chromosome_17 412190 409296 scaffold1_size20154211_pilon 13889698 13892695
755 chromosome_17 409054 376818 scaffold1_size20154211_pilon 13892680 13924741
756 no_match 0 0 scaffold1_size20154211_pilon 13924742 13924862
-1 chromosome_3 738178 744813 scaffold1_size20154211_pilon 13924863 13931483
757 chromosome_17 376716 372383 scaffold1_size20154211_pilon 13931484 13935815
758 no_match 0 0 scaffold1_size20154211_pilon 13935816 13936167
759 chromosome_17 372109 371724 scaffold1_size20154211_pilon 13936168 13936558
760 no_match 0 0 scaffold1_size20154211_pilon 13936559 13937106
761 chromosome_17 371349 370942 scaffold1_size20154211_pilon 13937107 13937518
762 no_match 0 0 scaffold1_size20154211_pilon 13937519 13937901
763 chromosome_17 370799 367446 scaffold1_size20154211_pilon 13937902 13941212
764 no_match 0 0 scaffold1_size20154211_pilon 13941213 13941389
765 chromosome_17 367253 366324 scaffold1_size20154211_pilon 13941390 13942294
766 no_match 0 0 scaffold1_size20154211_pilon 13942295 13942720
767 chromosome_17 365932 365055 scaffold1_size20154211_pilon 13942721 13943620
768 no_match 0 0 scaffold1_size20154211_pilon 13943621 13944160
769 chromosome_17 364623 363436 scaffold1_size20154211_pilon 13944161 13945357
770 no_match 0 0 scaffold1_size20154211_pilon 13945358 13945373
771 chromosome_10 1731843 1732686 scaffold1_size20154211_pilon 13945374 13946225
772 no_match 0 0 scaffold1_size20154211_pilon 13946226 13946386
773 chromosome_17 363292 360650 scaffold1_size20154211_pilon 13946387 13949128
774 no_match 0 0 scaffold1_size20154211_pilon 13949129 13950788
775 chromosome_17 359984 355886 scaffold1_size20154211_pilon 13950789 13954776
776 no_match 0 0 scaffold1_size20154211_pilon 13954777 13954883
777 chromosome_17 355884 349223 scaffold1_size20154211_pilon 13954884 13961505
778 chromosome_17 346967 341604 scaffold1_size20154211_pilon 13961507 13966815
779 no_match 0 0 scaffold1_size20154211_pilon 13966816 13967000
780 chromosome_17 341410 341234 scaffold1_size20154211_pilon 13967001 13967176
781 no_match 0 0 scaffold1_size20154211_pilon 13967177 13967592
782 chromosome_17 340926 335738 scaffold1_size20154211_pilon 13967593 13972779