From cdd2a71870b0a715c08a5221849d46ed33e79f72 Mon Sep 17 00:00:00 2001 From: Mayo Faulkner Date: Thu, 11 Apr 2024 10:34:06 +0100 Subject: [PATCH] update phy_launcher imports --- launch_phy/README.md | 2 +- launch_phy/phy_launcher.py | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) diff --git a/launch_phy/README.md b/launch_phy/README.md index 084f3f1..3ba5d13 100644 --- a/launch_phy/README.md +++ b/launch_phy/README.md @@ -14,7 +14,7 @@ e.g. `python int-brain-lab\iblapps\launch_phy\phy_launcher.py -e a3df91c8-52a6-4 or: -`python phys_launcher.py -pid 2aea57ac-d3d0-4a09-b6fa-0aa9d58d1e11` +`python phy_launcher.py -pid 2aea57ac-d3d0-4a09-b6fa-0aa9d58d1e11` Quality metrics will be computed within phy and displayed automatically. Description of metrics can be found here: https://docs.google.com/document/d/1ba_krsfm4epiAd0zbQ8hdvDN908P9VZOpTxkkH3P_ZY/edit# diff --git a/launch_phy/phy_launcher.py b/launch_phy/phy_launcher.py index 6ae4aa7..750adf9 100644 --- a/launch_phy/phy_launcher.py +++ b/launch_phy/phy_launcher.py @@ -25,8 +25,8 @@ def launch_phy(probe_name=None, eid=None, pid=None, subj=None, date=None, sess_n from one.api import ONE from iblatlas.atlas import AllenAtlas from brainbox.io.one import SpikeSortingLoader - from ibllib.io import spikeglx - one = one or ONE(base_url='https://openalyx.internationalbrainlab.org') + import spikeglx + one = one or ONE() ba = AllenAtlas() datasets = [