No slcStack.h5 with gamma processor

[gongzhiqiang97]

There are always errors when i run as follows:

miaplpyApp.py YuzhouSen.template --dostep load_data ./

........
.......
processor: gamma
Traceback (most recent call last):
File "/home/sar02/tools/MiaplPy/miaplpy/miaplpyApp.py", line 801, in
main()
File "/home/sar02/tools/MiaplPy/miaplpy/miaplpyApp.py", line 82, in main
app.open()
File "/home/sar02/tools/MiaplPy/miaplpy/miaplpyApp.py", line 176, in open
self.date_list, self.num_pixels, self.metadata = read_initial_info(self.workDir, self.templateFile)
File "/home/sar02/tools/MiaplPy/miaplpy/objects/utils.py", line 1221, in read_initial_info
iDict = read_inps2dict(inps_loadSlc)
File "/home/sar02/tools/MiaplPy/miaplpy/objects/utils.py", line 1293, in read_inps2dict
shutil.copytree(reference_dir, out_reference)
File "/home/sar02/anaconda3/envs/insar/lib/python3.8/shutil.py", line 555, in copytree
with os.scandir(src) as itr:
FileNotFoundError: [Errno 2] No such file or directory: ''

here is my template:
miaplpy.load.processor = gamma
miaplpy.load.unwFile = ./PROCESS/DONE/IFG*/diff* rlks.unw
miaplpy.load.corFile = ./PROCESS/DONE/IFG* /* filt*rlks.cor
miaplpy.load.connCompFile = None
miaplpy.load.intFile = None

miaplpy.load.slcFile = ./merged/SLC/* /*.slc.full #[path2slc_file]

miaplpy.load.demFile = ./PROCESS/SIM/sim_${m_date12}/sim*.hgt_sim
miaplpy.load.lookupYFile = ./PROCESS/SIM/sim_${m_date12}/sim*.UTM_TO_RDC
miaplpy.load.lookupXFile = ./PROCESS/SIM/sim_${m_date12}/sim*.UTM_TO_RDC
miaplpy.load.incAngleFile = None
miaplpy.load.azAngleFile = None
miaplpy.load.shadowMaskFile = None
miaplpy.load.bperpFile = ./merged/baselines/* /* .base_perp

miaplpy.multiprocessing.numProcessor = 4
miaplpy.interferograms.type = single_reference

mintpy.compute.cluster = local # if dask is not available, set this option to no
mintpy.compute.numWorker = 8

how can i create the file of slcStack.h5?
i have prepared all files of this needed and checked all path, those are ok. so how can i solve this problem? hope your advice! thanks!

[alejobeap]

HI
I have the same problem I run the stack with ISCE but don't find the slc.full in the folder.
In the SLC folder there are the *.slc.full.vrt and *slc.full.xml for each date.
Thanks
Alejandro

[mirzaees]

Hi @gongzhiqiang97 and @alejobeap
Thank you for pointing to the bug. Unfortunately I don't have data processed with gamma. It will be very helpful if you can provide me some sample data so I can test and debug the problem.

[esrivas17]

To get the "slc.full" files you need to edit the configs/config_merge_* files in your ISCE directory.
In each of these files you have several options to run mergeBurst.py, you only need to change the use_virtual_files flag to False and run it again.
Edit: Sorry this is the case for ISCE, not sure about GAMMA

[david-ncu2019]

Dear all,

I hope that someone can share how to obtain slcStack.h5 after processing the TerraSAR-X and Sentinel-1 images with ISCE. I cannot find any guidance from tutorials.

The purpose is to save the disk space by keeping necessary files only for further processing, since the output from ISCE may take 500 GB - 1 TB.

Thanks so much!