Clinical Kernel

[annette987]

I have been using 'survivalsvm' but have just learnt from this paper https://www.elen.ucl.ac.be/Proceedings/esann/esannpdf/es2010-16.pdf about the idea of a clinical kernel for survivalsvm. I was wondering if the clinical kernel has been implemented in R and if so how would I access it. Thanks.

[mnwright]

It's not yet implemented in the package. Do you know of any other implementation?

[annette987]

Yes, there is a Python implementation here: https://github.com/sebp/scikit-survival
See scikit-survival/sksurv/kernels/clinical.py

[mnwright]

Thanks, that looks doable.
@fouodo What do you think?

[fouodo]

I think we can integrate that to the package. I will add the task into my toDo list. Regards, Cesaire

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On 10. Apr 2019, at 13:00, Marvin N. Wright ***@***.***> wrote: Thanks, that looks doable. @fouodo <https://github.com/fouodo> What do you think? — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AZPNMGeBkGbTtlEnMTx1BlItN-W8ehm7ks5vfcRagaJpZM4cUz2s>.

[annette987]

Thank you very much.

[annette987]

Just wondering if you have had any time to start on this task yet.

[fouodo]

Hi Annette, sorry, not yet. But I will try to do it in the next day. Thank you to remember me about that. Best regards, Cesaire

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On 24. May 2019, at 08:39, annette987 ***@***.***> wrote: Just wondering if you have had any time to start on this task yet. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#5?email_source=notifications&email_token=AGJ42MBXCDKUL56UBG6EY73PW6ETRA5CNFSM4HCTHWWKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGODWEJRSQ#issuecomment-495491274>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AGJ42MDFGYTFFWJCXVJBOJ3PW6ETRANCNFSM4HCTHWWA>.

[annette987]

Hi Cesaire,
I really appreciate you doing this. Have you had a chance to make any progress on it yet?
Thanks,
Annette