maf-summary

• Function Introduction

  Mutation Annotation Format (MAF) Summary and Visualization.

• Data Structure

  MAF format: Mutation Annotation Format.

• Parameters Details

  Upload | Download

  Browser: users can read and upload local computer files

  Example Download: sample data download

  Result Download: the result image or all files are compressed and downloaded

  Width: the width of the output image (the default is inches, such as 12 x 7 inch in the standard)

  Height: the height of the output image (the default is inches, such as 12 x 7 inch)

  DPI: image resolution (300dpi is higher image quality by default)

  Format: image format selection, all images provide PDF, PNG and other major scientific research formats

  Calculation | drawing

  Title: the title of the image, which can replace the default title of the image

  Theme: the theme of the image. Ggplot2 provides a variety of personalized themes

  Font family: font (such as time new Roma specified by mainstream journals)

  Alpha: transparency of the element (0-1, 0 for transparency, 1 for opacity)

  Legend position: the position of the legend in the image

  Legend direction: arrangement of multiple elements in legend (horizontal or vertical)

  Legend Title Size: Legend Main Title Size

  Legend text size: the size of the element text in the legend

  Axis title size: the size of the image axis title

  Axis font size: the size of the image axis scale font

  Axis text angle: the angle of the image axis text

  Axis adjust: image axis text distance (fine tuning)

  Special parameters

  Program analysis content parameters: specific algorithm or implementation can refer to the core module official documentation

  Refer to the detailed tutorial video of our platform for complex programs online: https://space.bilibili.com/351815613

  Main beautification parameters: https://ggplot2.tidyverse.org/reference/

  For more special parameters, please refer to: https://ggplot2.tidyverse.org/reference/theme.html

• Reference Packages

  maftools: (Maintainer: Anand Mayakonda anand_mt@hotmail.com)