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poster_room.json
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{
"poster_show": true,
"lang": "en",
"meeting_room_base_url": "https://meet.jit.si/jobim2020_",
"poster_base_url": "https://www.sfbi.fr/sites/sfbi.fr/files/jobim/jobim2020/posters/compressed/",
"thumbnail_base_url": "https://www.sfbi.fr/sites/sfbi.fr/files/jobim/jobim2020/posters/thumbnails/",
"filter_list": ["categories", "authors"],
"match_list": ["title", "keywords", "number"],
"labels": {
"closed": {
"en": "The virtual poster room is currently closed. Please come back later, thanks for your visit.",
"fr": "La salle virtuelle des posters est actuellement fermée. Veuillez repasser plus tard, merci pour votre visite."
},
"authors": {
"en": "Authors",
"fr": "Auteurs"
},
"institutes": {
"en": "Institutes",
"fr": "Instituts"
},
"keywords": {
"en": "Keywords",
"fr": "Mots clés"
},
"categories": {
"en": "Categories",
"fr": "Categories"
},
"room": {
"en": "Room",
"fr": "Salle"
},
"pdf": {
"en": "Download PDF",
"fr": "Télécharger le PDF"
},
"title_filter": {
"en": "Title contains",
"fr": "Le titre contient"
},
"keywords_filter": {
"en": "Containing keywords",
"fr": "Contenant les mots clés"
},
"number_filter": {
"en": "Poster number",
"fr": "Numéro du poster"
},
"posters_count": {
"en": "Displaying",
"fr": "Selection de "
},
"over": {
"en": "over",
"fr": "sur"
},
"posters": {
"en": "posters",
"fr": "posters"
},
"NGS": {
"en": "Algo/NGS",
"fr": "Algo/NGS"
},
"service": {
"en": "Database & Service",
"fr": "Base de données & service"
},
"evolution": {
"en": "Evolution, phylogenetics and population genetics",
"fr": "Évolution, phylogénétique et génétique des populations"
},
"functional genomics": {
"en": "Functional genomics",
"fr": "Génomique fonctionnelle"
},
"metabolomics": {
"en": "Metabolomics",
"fr": "Métabolomique"
},
"metagenomics": {
"en": "Metagenomics",
"fr": "Métagénomique"
},
"FAIR": {
"en": "Reproductibility, open science, workflows, FAIR",
"fr": "Reproductibilité, open science, workflows, FAIR"
},
"stat": {
"en": "Statistics, Machine Learning and AI",
"fr": "Statistiques, Machine Learning et I.A."
},
"structure": {
"en": "Structural bioinformatics & Protein annotations",
"fr": "Bioinformatique Structurelle & Annotation des Protéines"
},
"system": {
"en": "Systems Biology",
"fr": "Biologie des systèmes"
},
"medicine": {
"en": "Variant calling & Medicine",
"fr": "Variant calling & Médecine"
},
"visualization": {
"en": "Visualization",
"fr": "Visualisation"
}
},
"posters": [{
"number": 4,
"title": "SAMBA: a flexible automated workflow for the reproducible and standardized processing of eDNA metabarcoding data",
"keywords": "Metabarcoding, Workflow, eDNA",
"authors": {
"Laure Quintric": true,
"Cyril Noël": true,
"Laura Leroi": true,
"Alexandre Cormier": true,
"Patrick Durand": true
},
"categories": {
"FAIR": true
},
"room": "poster_4",
"poster": "jobim2020_poster_4.pdf",
"thumbnail": "jobim2020_poster_4.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 5,
"title": "TimeNexus identifies dynamic pathways from gene expression time-series with temporal networks",
"keywords": "bioinformatics, transcriptomics, RNA-sequencing, multi-layer network, time course, pathway analysis, cellular responses, Cytoscape",
"authors": {
"Michaël Pierrelée": true,
"Laurent Tichit": true,
"Bianca Habermann": true,
"Fabrice Lopez": true
},
"categories": {
"NGS": true
},
"room": "poster_5",
"poster": "jobim2020_poster_5.pdf",
"thumbnail": "jobim2020_poster_5.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 6,
"title": "Online exploration of transcription profiles along B. subtilis and S. aureus",
"keywords": "transcriptomic profiles, visualization interface, exploration",
"authors": {
"Sandra Dérozier": true,
"Pierre Nicolas": true,
"Ulrike Mäder": true,
"Cyprien Guérin": true
},
"categories": {
"visualization": true
},
"room": "poster_6",
"poster": "jobim2020_poster_6.pdf",
"thumbnail": "jobim2020_poster_6.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 7,
"title": "Benchmarking joint multi-omics dimensionality reduction approaches for cancer study",
"keywords": "Matrix factorization, Dimensionality reduction, Data integration, Multi-omics, Cancer, Single-Cell",
"authors": {
"Laura Cantini": true,
"Pooya Zakeri": true,
"Céline Hernandez": true,
"Aurelien Naldi": true,
"Denis Thieffry": true,
"Elisabeth Remy": true,
"Anais Baudot": true
},
"categories": {
"system": true
},
"room": "poster_7",
"poster": "jobim2020_poster_7.pdf",
"thumbnail": "jobim2020_poster_7.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 9,
"title": "Whole metagenome analysis with metagWGS",
"keywords": "metagenomics, Nextflow pipeline, workflow, whole genome shotgun sequencing data, Illumina short reads, mycotoxins",
"authors": {
"Joanna Fourquet": true,
"Céline Noirot": true,
"Christophe Klopp": true,
"Philippe Pinton": true,
"Sylvie Combes": true,
"Claire Hoede": true,
"Géraldine Pascal": true
},
"categories": {
"metagenomics": true
},
"room": "poster_9",
"poster": "jobim2020_poster_9.pdf",
"thumbnail": "jobim2020_poster_9.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 12,
"title": "RNA-seq Nextflow pipeline",
"keywords": "RnaSeq, Nextflow, pipeline, parallelization",
"authors": {
"Souhila Amanzougarene": true
},
"categories": {
"FAIR": true
},
"room": "poster_12",
"poster": "jobim2020_poster_12.pdf",
"thumbnail": "jobim2020_poster_12.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 13,
"title": "Exome and CNV Sequencing Analysis pipeline with Nextflow",
"keywords": "WES, Nextflow, CoDE-seq, Workflow, NGS",
"authors": {
"Alaa Badreddine": true
},
"categories": {
"FAIR": true
},
"room": "poster_13",
"poster": "jobim2020_poster_13.pdf",
"thumbnail": "jobim2020_poster_13.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 14,
"title": "HiC DOC: detecting and comparing genomic compartments",
"keywords": "hi-c, genomic compartments, bias correction, unsupervised learning, differential analysis",
"authors": {
"Cyril Kurylo": true,
"Sylvain Foissac": true,
"Matthias Zytnicki": true
},
"categories": {
"NGS": true
},
"room": "poster_14",
"poster": "jobim2020_poster_14.pdf",
"thumbnail": "jobim2020_poster_14.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 15,
"title": "Metage2Metabo: metabolic complementarity applied to genomes of large-scale microbiotas for the identification of keystone species",
"keywords": "systems biology, microbiota, metagenomics, metabolism, metabolic network, keystone species",
"authors": {
"Arnaud Belcour": true,
"Clémence Frioux": true,
"Méziane Aite": true,
"Anthony Bretaudeau": true,
"Falk Hildebrand": true,
"Anne Siegel": true
},
"categories": {
"system": true
},
"room": "poster_15",
"poster": "jobim2020_poster_15.pdf",
"thumbnail": "jobim2020_poster_15.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 16,
"title": "MetIDfyR, an open-source R script to decipher small-molecule drug metabolism through high resolution mass spectrometry: Application in doping control",
"keywords": "High-Resolution Mass Spectrometry, Drug testing, Small molecules, Bioinformatic, Cheminformatic, Metabolism, Data-mining, Untargeted analysis",
"authors": {
"Agnès Barnabé": true,
"Vivian Delcourt": true,
"Benoît Loup": true,
"Patrice Garcia": true,
"François André": true,
"Benjamin Chabot": true,
"Yves Moulard": true,
"Marie-Agnès Popot": true,
"Ludovic Bailly-Chouriberry": true
},
"categories": {
"FAIR": true
},
"room": "poster_16",
"poster": "jobim2020_poster_16.pdf",
"thumbnail": "jobim2020_poster_16.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 19,
"title": "MEMHDX v2: implementation of new functionalities and redesign of MEMHDX - An interactive tool to expedite the statistical validation and visualization of large HDX-MS datasets.",
"keywords": "HDX-MS, Statistical modelling, Web application, UX design",
"authors": {
"Stevenn Volant": true,
"Rachel Torchet": true,
"Véronique Hourdel": true,
"Sébastien Brier": true
},
"categories": {},
"room": "poster_19",
"poster": "jobim2020_poster_19.pdf",
"thumbnail": "jobim2020_poster_19.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 20,
"title": "In silico characterization of the gene repertoires of immunoglobulins and T cell receptors of the various inbred laboratory strains of Mus musculus",
"keywords": "immunogenetics, immunoinformatics, inbred mice, characterization",
"authors": {
"Anna Tran": true,
"Géraldine Folch": true,
"Véronique Giudicelli": true,
"Sofia Kossida": true
},
"categories": {
"functional genomics": true
},
"room": "poster_20",
"poster": "jobim2020_poster_20.pdf",
"thumbnail": "jobim2020_poster_20.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 21,
"title": "VCFProcessor: a complete toolbox for improved VCF file analysis",
"keywords": "VCF, NGS, Variants",
"authors": {
"Thomas Ludwig": true,
"Gaelle Marenne": true,
"Emmanuelle Génin": true
},
"categories": {
"medicine": true
},
"room": "poster_21",
"poster": "jobim2020_poster_21.pdf",
"thumbnail": "jobim2020_poster_21.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 22,
"title": "The BIBS service (Bioinformatics and Biostatistics) at the Centre International de Recherche en Infectiologie (CIRI)",
"keywords": "Bioinformatics, Biostatistics, Infectiology, high-throughput sequencing",
"authors": {
"Marie Cariou": true,
"Omran Allatif": true,
"Antoine Corbin": true
},
"categories": {
"service": true
},
"room": "poster_22",
"poster": "jobim2020_poster_22.pdf",
"thumbnail": "jobim2020_poster_22.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 23,
"title": "A pipeline for quality control of target-enrichment DNA sequencing data",
"keywords": "NGS, Capture, Quality control, Pipeline",
"authors": {
"Chloé Beaumont": true,
"Sophie Gallina": true,
"Vincent Castric": true,
"Mathieu Genete": true
},
"categories": {
"NGS": true
},
"room": "poster_23",
"poster": "jobim2020_poster_23.pdf",
"thumbnail": "jobim2020_poster_23.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 24,
"title": "Exome sequencing allows detection of relevant pharmacogenetics variants in epileptic patients.",
"keywords": "Personalized medicine, Predictive medicine, Genomic",
"authors": {
"Simon Verdez": true,
"Philippine Garret": true,
"Emilie Tisserant": true,
"Céline Verstuyft": true,
"Antonio Vitobello": true,
"Frédéric Tran Mau-Them": true,
"Christophe Philippe": true,
"Marc Bardou": true,
"Maxime Luu": true,
"Juliette Albuisson": true,
"Abderrahmane Bourredjem": true,
"Patrick Callier": true,
"Christel Thauvin-Robinet": true,
"Laurence Faivre": true,
"Yannis Duffourd": true,
"Nicolas Picard": true
},
"categories": {
"medicine": true
},
"room": "poster_24",
"poster": "jobim2020_poster_24.pdf",
"thumbnail": "jobim2020_poster_24.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 25,
"title": "Pipeline for ribosome profiling analysis (RiboSeq)",
"keywords": "Bioinformatics analysis, Pipeline, Ribosome profiling, Quality control, Omics, Standardization",
"authors": {
"Pauline François": true,
"Stéphane Demais": true,
"Olivier Namy": true
},
"categories": {
"NGS": true
},
"room": "poster_25",
"poster": "jobim2020_poster_25.pdf",
"thumbnail": "jobim2020_poster_25.jpg",
"display": true,
"init_display": true,
"match_title": true,
"match_keywords": true,
"match_number": true
}, {
"number": 26,
"title": "Automated solutions for big genomic data treatment in the context of the medical diagnosis platform SeqOIA",
"keywords": "SeqOIA, Spice, GLeaves, Medical diagnosis pipelines, Docker, Snakemake",
"authors": {
"Adrien Legendre": true,
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