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obsolete single steps under "inositol phosphate metabolic process" #24270

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ValWood opened this issue Oct 25, 2022 · 3 comments
Open

obsolete single steps under "inositol phosphate metabolic process" #24270

ValWood opened this issue Oct 25, 2022 · 3 comments

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@ValWood
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ValWood commented Oct 25, 2022

Please provide as much information as you can:

similar to
#24267

  • GO term ID and Label
    but we don't have so many of the intermediate steps instantiated

GO:0071543    diphosphoinositol polyphosphate metabolic process
(2 annotations)
1 PomBase (removed)
1 human UniProt

GO:0032957    inositol trisphosphate metabolic process
22 EXP annotations

  • Reason for deprecation

single steps

  • "Replace by" term (ID and label)
    If all annotations can safely be moved to that term

parent
inositol phosphate metabolic process

  • Are there annotations to this term?
  • How many EXP:
  • Are there mappings and cross references to this term? (InterPro, Keywords; check QuickGO cross-references section)

  • Is this term in a subset? (check the AmiGO page for that term)

  • Any other information

@ValWood
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ValWood commented Oct 25, 2022

This is basically the pathway

inositol

@ValWood
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ValWood commented Oct 25, 2022

It would also be more accurate to call
inositol phosphate metabolic process
inositol polyphosphate metabolic process (and align with #24267)

@ValWood ValWood self-assigned this Nov 21, 2022
@ValWood ValWood removed their assignment Nov 24, 2022
@ValWood
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ValWood commented Oct 25, 2024

IP2 and IP3 are end points not intermedaites

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