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Remove stats page from AmiGO #715

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ValWood opened this issue Feb 12, 2024 · 5 comments
Open

Remove stats page from AmiGO #715

ValWood opened this issue Feb 12, 2024 · 5 comments

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@ValWood
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ValWood commented Feb 12, 2024

GO has 2 pages with statistics with partially overlapping content:

Home page
https://www.geneontology.org/stats.html
See section changes in the GO resource over time
Number of annotations by evidence

Amigo
https://amigo.geneontology.org/amigo/base_statistics

Also, I question the label of
Experimental annotations by assigner
Because I know that Uniprot have not made 4M EXP annotations

And
Experimental annotation publications by assigner
This is not publication because PomBase does not have 26K publications

Can the labels be reviewed/corrected, the usefulness and content of the graphs be assessed, and ideally a single statistics page be presented. If this is not possible could the 2 disparate sources of statistics be clearly linked and the rationale for 2 different pages be explained somewhere (ideally all annotation status statistics would be collected together)

@pgaudet
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pgaudet commented Feb 13, 2024

Experimental annotations by assigner
Because I know that Uniprot have not made 4M EXP annotations

I think the labels are confusing because one 1 column out of 2 is labeled: the first bar is GO Central (IBAs)

ideally a single statistics page be presented

I agree

@ValWood
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ValWood commented Feb 13, 2024

I think the labels are confusing because one 1 column out of 2 is labeled: the first bar is GO Central (IBAs)

true, but the titles of all
Experimental annotation publications by assigner
Experimental annotations by assigned
Experimental annotations by species

are ALL incorrect because all 3 graphs include non-experimental annotations

@kltm
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kltm commented Feb 15, 2024

Personally, at this point, I think the AmiGO ones can go. Any reason not to head that way?

@pgaudet
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pgaudet commented Feb 15, 2024

I agree, lets remove the AmiGO stats pages

@kltm kltm changed the title Statisics pages, partitioning and content Remove stats page from AmiGO Feb 15, 2024
@kltm kltm transferred this issue from geneontology/go-site Feb 15, 2024
@kltm
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kltm commented Apr 8, 2024

Talking to @pgaudet , will hide first, clean up later. Will point to "new" stats.

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