Skip to content

Commit

Permalink
Merge pull request #107 from mvdbeek/update_schema_salad_version
Browse files Browse the repository at this point in the history
Upgrade schema-salad version and auto-generated documents
  • Loading branch information
mvdbeek authored Dec 2, 2024
2 parents ebc28c7 + c13768d commit 7afc066
Show file tree
Hide file tree
Showing 50 changed files with 174 additions and 174 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/maven.yml
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ jobs:
- name: Set up Python
uses: actions/setup-python@v1
with:
python-version: 3.7
python-version: 3.8
- name: Install Python dependencies
run: |
python -m pip install --upgrade pip
Expand Down
2 changes: 1 addition & 1 deletion .github/workflows/typescript.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ jobs:
- run: npm install
- run: npm test
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v2.1.0
uses: codecov/codecov-action@v5.0.7
with:
directory: ./typescript
fail_ci_if_error: true
Expand Down
2 changes: 1 addition & 1 deletion requirements.txt
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
bioblend
pyyaml
schema-salad >= 8.2
schema-salad <= 8.7.20241010092723
typing_extensions
6 changes: 3 additions & 3 deletions typescript/docs/classes/ArraySchema.html

Large diffs are not rendered by default.

6 changes: 3 additions & 3 deletions typescript/docs/classes/EnumSchema.html

Large diffs are not rendered by default.

26 changes: 13 additions & 13 deletions typescript/docs/classes/GalaxyWorkflow.html

Large diffs are not rendered by default.

8 changes: 4 additions & 4 deletions typescript/docs/classes/RecordField.html

Large diffs are not rendered by default.

6 changes: 3 additions & 3 deletions typescript/docs/classes/RecordSchema.html

Large diffs are not rendered by default.

4 changes: 2 additions & 2 deletions typescript/docs/classes/Report.html

Large diffs are not rendered by default.

6 changes: 3 additions & 3 deletions typescript/docs/classes/StepPosition.html

Large diffs are not rendered by default.

10 changes: 5 additions & 5 deletions typescript/docs/classes/ToolShedRepository.html

Large diffs are not rendered by default.

4 changes: 2 additions & 2 deletions typescript/docs/classes/ValidationException.html

Large diffs are not rendered by default.

18 changes: 9 additions & 9 deletions typescript/docs/classes/WorkflowInputParameter.html

Large diffs are not rendered by default.

12 changes: 6 additions & 6 deletions typescript/docs/classes/WorkflowOutputParameter.html

Large diffs are not rendered by default.

32 changes: 16 additions & 16 deletions typescript/docs/classes/WorkflowStep.html

Large diffs are not rendered by default.

10 changes: 5 additions & 5 deletions typescript/docs/classes/WorkflowStepInput.html

Large diffs are not rendered by default.

4 changes: 2 additions & 2 deletions typescript/docs/classes/WorkflowStepOutput.html

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion typescript/docs/enums/Any.html
Original file line number Diff line number Diff line change
@@ -1 +1 @@
<!DOCTYPE html><html class="default"><head><meta charSet="utf-8"/><meta http-equiv="x-ua-compatible" content="IE=edge"/><title>Any | org.galaxyproject.gxformat2.v19_09</title><meta name="description" content="Documentation for org.galaxyproject.gxformat2.v19_09"/><meta name="viewport" content="width=device-width, initial-scale=1"/><link rel="stylesheet" href="../assets/style.css"/><link rel="stylesheet" href="../assets/highlight.css"/><script async src="../assets/search.js" id="search-script"></script></head><body><script>document.body.classList.add(localStorage.getItem("tsd-theme") || "os")</script><header><div class="tsd-page-toolbar"><div class="container"><div class="table-wrap"><div class="table-cell" id="tsd-search" data-base=".."><div class="field"><label for="tsd-search-field" class="tsd-widget search no-caption">Search</label><input type="text" id="tsd-search-field"/></div><ul class="results"><li class="state loading">Preparing search index...</li><li class="state failure">The search index is not available</li></ul><a href="../index.html" class="title">org.galaxyproject.gxformat2.v19_09</a></div><div class="table-cell" id="tsd-widgets"><div id="tsd-filter"><a href="#" class="tsd-widget options no-caption" data-toggle="options">Options</a><div class="tsd-filter-group"><div class="tsd-select" id="tsd-filter-visibility"><span class="tsd-select-label">All</span><ul class="tsd-select-list"><li data-value="public">Public</li><li data-value="protected">Public/Protected</li><li data-value="private" class="selected">All</li></ul></div> <input type="checkbox" id="tsd-filter-inherited" checked/><label class="tsd-widget" for="tsd-filter-inherited">Inherited</label><input type="checkbox" id="tsd-filter-externals" checked/><label class="tsd-widget" for="tsd-filter-externals">Externals</label></div></div><a href="#" class="tsd-widget menu no-caption" data-toggle="menu">Menu</a></div></div></div></div><div class="tsd-page-title"><div class="container"><ul class="tsd-breadcrumb"><li><a href="../modules.html">org.galaxyproject.gxformat2.v19_09</a></li><li><a href="Any.html">Any</a></li></ul><h1>Enumeration Any </h1></div></div></header><div class="container container-main"><div class="row"><div class="col-8 col-content"><section class="tsd-panel-group tsd-index-group"><h2>Index</h2><section class="tsd-panel tsd-index-panel"><div class="tsd-index-content"><section class="tsd-index-section "><h3>Enumeration members</h3><ul class="tsd-index-list"><li class="tsd-kind-enum-member tsd-parent-kind-enum"><a href="Any.html#ANY" class="tsd-kind-icon">ANY</a></li></ul></section></div></section></section><section class="tsd-panel-group tsd-member-group "><h2>Enumeration members</h2><section class="tsd-panel tsd-member tsd-kind-enum-member tsd-parent-kind-enum"><a id="ANY" class="tsd-anchor"></a><h3 class="tsd-anchor-link">ANY<a href="#ANY" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">ANY<span class="tsd-signature-symbol"> = &quot;Any&quot;</span></div><aside class="tsd-sources"><ul><li>Defined in <a href="https://github.com/jmchilton/gxformat2/blob/ee25b57/typescript/src/Any.ts#L3">src/Any.ts:3</a></li></ul></aside></section></section></div><div class="col-4 col-menu menu-sticky-wrap menu-highlight"><nav class="tsd-navigation primary"><ul><li class=""><a href="../modules.html">Exports</a></li></ul></nav><nav class="tsd-navigation secondary menu-sticky"><ul><li class="current tsd-kind-enum"><a href="Any.html" class="tsd-kind-icon">Any</a><ul><li class="tsd-kind-enum-member tsd-parent-kind-enum"><a href="Any.html#ANY" class="tsd-kind-icon">ANY</a></li></ul></li></ul></nav></div></div></div><footer class="with-border-bottom"><div class="container"><h2>Legend</h2><div class="tsd-legend-group"><ul class="tsd-legend"><li class="tsd-kind-constructor tsd-parent-kind-class"><span class="tsd-kind-icon">Constructor</span></li><li class="tsd-kind-property tsd-parent-kind-class"><span class="tsd-kind-icon">Property</span></li><li class="tsd-kind-method tsd-parent-kind-class"><span class="tsd-kind-icon">Method</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-class tsd-is-static"><span class="tsd-kind-icon">Static property</span></li><li class="tsd-kind-method tsd-parent-kind-class tsd-is-static"><span class="tsd-kind-icon">Static method</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-interface"><span class="tsd-kind-icon">Property</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-class tsd-is-inherited"><span class="tsd-kind-icon">Inherited property</span></li></ul></div><h2>Settings</h2><p>Theme <select id="theme"><option value="os">OS</option><option value="light">Light</option><option value="dark">Dark</option></select></p></div></footer><div class="container tsd-generator"><p>Generated using <a href="https://typedoc.org/" target="_blank">TypeDoc</a></p></div><div class="overlay"></div><script src="../assets/main.js"></script></body></html>
<!DOCTYPE html><html class="default"><head><meta charSet="utf-8"/><meta http-equiv="x-ua-compatible" content="IE=edge"/><title>Any | org.galaxyproject.gxformat2.v19_09</title><meta name="description" content="Documentation for org.galaxyproject.gxformat2.v19_09"/><meta name="viewport" content="width=device-width, initial-scale=1"/><link rel="stylesheet" href="../assets/style.css"/><link rel="stylesheet" href="../assets/highlight.css"/><script async src="../assets/search.js" id="search-script"></script></head><body><script>document.body.classList.add(localStorage.getItem("tsd-theme") || "os")</script><header><div class="tsd-page-toolbar"><div class="container"><div class="table-wrap"><div class="table-cell" id="tsd-search" data-base=".."><div class="field"><label for="tsd-search-field" class="tsd-widget search no-caption">Search</label><input type="text" id="tsd-search-field"/></div><ul class="results"><li class="state loading">Preparing search index...</li><li class="state failure">The search index is not available</li></ul><a href="../index.html" class="title">org.galaxyproject.gxformat2.v19_09</a></div><div class="table-cell" id="tsd-widgets"><div id="tsd-filter"><a href="#" class="tsd-widget options no-caption" data-toggle="options">Options</a><div class="tsd-filter-group"><div class="tsd-select" id="tsd-filter-visibility"><span class="tsd-select-label">All</span><ul class="tsd-select-list"><li data-value="public">Public</li><li data-value="protected">Public/Protected</li><li data-value="private" class="selected">All</li></ul></div> <input type="checkbox" id="tsd-filter-inherited" checked/><label class="tsd-widget" for="tsd-filter-inherited">Inherited</label><input type="checkbox" id="tsd-filter-externals" checked/><label class="tsd-widget" for="tsd-filter-externals">Externals</label></div></div><a href="#" class="tsd-widget menu no-caption" data-toggle="menu">Menu</a></div></div></div></div><div class="tsd-page-title"><div class="container"><ul class="tsd-breadcrumb"><li><a href="../modules.html">org.galaxyproject.gxformat2.v19_09</a></li><li><a href="Any.html">Any</a></li></ul><h1>Enumeration Any </h1></div></div></header><div class="container container-main"><div class="row"><div class="col-8 col-content"><section class="tsd-panel-group tsd-index-group"><h2>Index</h2><section class="tsd-panel tsd-index-panel"><div class="tsd-index-content"><section class="tsd-index-section "><h3>Enumeration members</h3><ul class="tsd-index-list"><li class="tsd-kind-enum-member tsd-parent-kind-enum"><a href="Any.html#ANY" class="tsd-kind-icon">ANY</a></li></ul></section></div></section></section><section class="tsd-panel-group tsd-member-group "><h2>Enumeration members</h2><section class="tsd-panel tsd-member tsd-kind-enum-member tsd-parent-kind-enum"><a id="ANY" class="tsd-anchor"></a><h3 class="tsd-anchor-link">ANY<a href="#ANY" aria-label="Permalink" class="tsd-anchor-icon"><svg xmlns="http://www.w3.org/2000/svg" class="icon icon-tabler icon-tabler-link" viewBox="0 0 24 24" stroke-width="2" stroke="currentColor" fill="none" stroke-linecap="round" stroke-linejoin="round"><path stroke="none" d="M0 0h24v24H0z" fill="none"></path><path d="M10 14a3.5 3.5 0 0 0 5 0l4 -4a3.5 3.5 0 0 0 -5 -5l-.5 .5"></path><path d="M14 10a3.5 3.5 0 0 0 -5 0l-4 4a3.5 3.5 0 0 0 5 5l.5 -.5"></path></svg></a></h3><div class="tsd-signature tsd-kind-icon">ANY<span class="tsd-signature-symbol"> = &quot;Any&quot;</span></div><aside class="tsd-sources"><ul><li>Defined in src/Any.ts:3</li></ul></aside></section></section></div><div class="col-4 col-menu menu-sticky-wrap menu-highlight"><nav class="tsd-navigation primary"><ul><li class=""><a href="../modules.html">Exports</a></li></ul></nav><nav class="tsd-navigation secondary menu-sticky"><ul><li class="current tsd-kind-enum"><a href="Any.html" class="tsd-kind-icon">Any</a><ul><li class="tsd-kind-enum-member tsd-parent-kind-enum"><a href="Any.html#ANY" class="tsd-kind-icon">ANY</a></li></ul></li></ul></nav></div></div></div><footer class="with-border-bottom"><div class="container"><h2>Legend</h2><div class="tsd-legend-group"><ul class="tsd-legend"><li class="tsd-kind-constructor tsd-parent-kind-class"><span class="tsd-kind-icon">Constructor</span></li><li class="tsd-kind-property tsd-parent-kind-class"><span class="tsd-kind-icon">Property</span></li><li class="tsd-kind-method tsd-parent-kind-class"><span class="tsd-kind-icon">Method</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-class tsd-is-static"><span class="tsd-kind-icon">Static property</span></li><li class="tsd-kind-method tsd-parent-kind-class tsd-is-static"><span class="tsd-kind-icon">Static method</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-interface"><span class="tsd-kind-icon">Property</span></li></ul><ul class="tsd-legend"><li class="tsd-kind-property tsd-parent-kind-class tsd-is-inherited"><span class="tsd-kind-icon">Inherited property</span></li></ul></div><h2>Settings</h2><p>Theme <select id="theme"><option value="os">OS</option><option value="light">Light</option><option value="dark">Dark</option></select></p></div></footer><div class="container tsd-generator"><p>Generated using <a href="https://typedoc.org/" target="_blank">TypeDoc</a></p></div><div class="overlay"></div><script src="../assets/main.js"></script></body></html>
2 changes: 1 addition & 1 deletion typescript/docs/enums/GalaxyType.html

Large diffs are not rendered by default.

Loading

0 comments on commit 7afc066

Please sign in to comment.