pybind11/eigen.h: No such file or directory

[KopiSoftware]

🐛 Bug

Compiling failed when run with python -m pip install -e src/home_robot. I solved it by removing relative dependency in src/home_robot/setup.py, as shown below. Then install these packages manually.

install_requires = [
    "numpy<1.24",
    "scipy==1.13.0",
    "hydra-core",
    "yacs",
    "h5py==3.11.0",
    "pybullet",
    "pygifsicle",
    "open3d",
    "numpy-quaternion",
    #"pybind11-global",          # commen this
    #"sophuspy==0.0.8",        # commen this
    "trimesh==3.23.5",
    "pin>=2.6.17",
    "torch_cluster",
    "torch_scatter",
    "pillow==9.5.0",  # For Detic compatibility
]

Then re-run python -m pip install -e src/home_robot, it will pass:

Installing collected packages: home-robot
  Attempting uninstall: home-robot
    Found existing installation: home-robot 0.1.0
    Uninstalling home-robot-0.1.0:
      Successfully uninstalled home-robot-0.1.0
  Running setup.py develop for home-robot
Successfully installed home-robot-0.1.0

Python 3.9.19 | packaged by conda-forge | (main, Mar 20 2024, 12:50:21) 
[GCC 12.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import home_robot
>>> 

Steps to Reproduce

Steps to reproduce the behavior:

(home-robot) kyle@kyle-ThinkPad:~/Programs/AI/home-robot$ python -m pip install -e src/home_robot

Expected behavior

Compile success

Additional context

-- Found pybind11: /opt/ros/noetic/include (found version "2.10.3")
      -- cmake python version: 3.9.19
      -- Configuring done (0.3s)
      -- Generating done (0.0s)
      -- Build files have been written to: /tmp/pip-install-ph4h1dkq/sophuspy_55f42457cf284e2ca8de813fd905c3e5/build/temp.linux-x86_64-cpython-39
      cmake --build . --config Release -- -j4
      [ 50%] Building CXX object CMakeFiles/sophuspy.dir/sophus/sophuspy.cpp.o
      /tmp/pip-install-ph4h1dkq/sophuspy_55f42457cf284e2ca8de813fd905c3e5/sophus/sophuspy.cpp:2:10: fatal error: pybind11/eigen.h: No such file or directory
          2 | #include <pybind11/eigen.h>
            |          ^~~~~~~~~~~~~~~~~~
      compilation terminated.
      make[2]: *** [CMakeFiles/sophuspy.dir/build.make:76: CMakeFiles/sophuspy.dir/sophus/sophuspy.cpp.o] Error 1
      make[1]: *** [CMakeFiles/Makefile2:83: CMakeFiles/sophuspy.dir/all] Error 2
      make: *** [Makefile:91: all] Error 2
      error: command '/home/kyle/anaconda3/envs/home-robot/bin/cmake' failed with exit code 2
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for sophuspy
  Running setup.py clean for sophuspy
Failed to build sophuspy