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Update Readme and setup.py
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emilhaegglund committed Jun 27, 2017
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7 changes: 5 additions & 2 deletions README.md
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Schavott v0.3.0
Schavott v0.4
========
[![bioconda-badge](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat-square)](http://bioconda.github.io)
Applictions to monitor scaffolding or assembly of bacterial genomes in Real-time with MinION sequencing.
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Minimum read length to use. (Default: 5000)

`--min_quality`
Minimum read quality. (Default: 9)
Minimum read quality. (Default: 9)

`--skip SKIP, -j SKIP`
Skip the first reads of the sequencing run. (Default: 0)

`--contig_file CONTIG_FILE, -c CONTIG_FILE`
Path to contig file if scaffolding, fasta-format.
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4 changes: 2 additions & 2 deletions setup.py
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setup(name='schavott',
version='0.3',
version='0.4',
description='Scaffolding and assembly in real-time',
url='http://github.com/emilhaegglund/schavott',
author='Emil Haegglund',
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'watchdog',
'numpy'],
keywords = ['MinION-sequencing', 'Bioinformatics', 'Real-time'],
download_url = 'https://github.com/emilhaegglund/schavott/tarball/v0.3'
download_url = 'https://github.com/emilhaegglund/schavott/tarball/v0.4'
)

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