From 7788c7467a35509c49ea242ae1eab376335825ee Mon Sep 17 00:00:00 2001 From: rcannood Date: Thu, 19 Dec 2024 19:13:51 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20scverse/?= =?UTF-8?q?anndataR@820b7e8619ea9943dad38a69d0cc5c1f41adb3fe=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- 404.html | 4 +- LICENSE-text.html | 2 +- LICENSE.html | 2 +- articles/anndataR.html | 12 +- articles/design.html | 161 +- articles/index.html | 2 +- authors.html | 2 +- deps/data-deps.txt | 4 +- deps/font-awesome-6.5.2/css/all.css | 8028 +++++++++++++++++ deps/font-awesome-6.5.2/css/all.min.css | 9 + deps/font-awesome-6.5.2/css/v4-shims.css | 2194 +++++ deps/font-awesome-6.5.2/css/v4-shims.min.css | 6 + .../webfonts/fa-brands-400.ttf | Bin 0 -> 209128 bytes .../webfonts/fa-brands-400.woff2 | Bin 0 -> 117852 bytes .../webfonts/fa-regular-400.ttf | Bin 0 -> 67860 bytes .../webfonts/fa-regular-400.woff2 | Bin 0 -> 25392 bytes .../webfonts/fa-solid-900.ttf | Bin 0 -> 420332 bytes .../webfonts/fa-solid-900.woff2 | Bin 0 -> 156400 bytes .../webfonts/fa-v4compatibility.ttf | Bin 0 -> 10832 bytes .../webfonts/fa-v4compatibility.woff2 | Bin 0 -> 4792 bytes index.html | 4 +- news/index.html | 2 +- pkgdown.yml | 2 +- reference/AnnData.html | 2 +- reference/anndataR-package.html | 2 +- reference/from_Seurat.html | 24 +- reference/from_SingleCellExperiment.html | 3 +- reference/generate_dataset.html | 2 +- reference/index.html | 2 +- reference/read_h5ad.html | 2 +- reference/to_Seurat.html | 2 +- reference/write_h5ad.html | 2 +- search.json | 2 +- 33 files changed, 10410 insertions(+), 67 deletions(-) create mode 100644 deps/font-awesome-6.5.2/css/all.css create mode 100644 deps/font-awesome-6.5.2/css/all.min.css create mode 100644 deps/font-awesome-6.5.2/css/v4-shims.css create mode 100644 deps/font-awesome-6.5.2/css/v4-shims.min.css create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-brands-400.ttf create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-brands-400.woff2 create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-regular-400.ttf create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-regular-400.woff2 create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-solid-900.ttf create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-solid-900.woff2 create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.ttf create mode 100644 deps/font-awesome-6.5.2/webfonts/fa-v4compatibility.woff2 diff --git a/404.html b/404.html index 2f9087e..ff19883 100644 --- a/404.html +++ b/404.html @@ -8,8 +8,8 @@ Page not found (404) • anndataR - - + + diff --git a/LICENSE-text.html b/LICENSE-text.html index 7d973fb..300b448 100644 --- a/LICENSE-text.html +++ b/LICENSE-text.html @@ -1,5 +1,5 @@ -License • anndataR +License • anndataR Skip to contents diff --git a/LICENSE.html b/LICENSE.html index 7d6e6fe..1c57058 100644 --- a/LICENSE.html +++ b/LICENSE.html @@ -1,5 +1,5 @@ -MIT License • anndataR +MIT License • anndataR Skip to contents diff --git a/articles/anndataR.html b/articles/anndataR.html index 39dce68..75cee58 100644 --- a/articles/anndataR.html +++ b/articles/anndataR.html @@ -8,8 +8,8 @@ Using anndataR • anndataR - - + + @@ -210,7 +210,7 @@

Session info#> other attached packages: #> [1] SingleCellExperiment_1.28.1 SummarizedExperiment_1.36.0 #> [3] Biobase_2.66.0 GenomicRanges_1.58.0 -#> [5] GenomeInfoDb_1.42.0 IRanges_2.40.0 +#> [5] GenomeInfoDb_1.42.1 IRanges_2.40.1 #> [7] S4Vectors_0.44.0 BiocGenerics_0.52.0 #> [9] MatrixGenerics_1.18.0 matrixStats_1.4.1 #> [11] SeuratObject_5.0.2 sp_2.1-4 @@ -223,15 +223,15 @@

Session info#> [10] bookdown_0.41 fastmap_1.2.0 jsonlite_1.8.9 #> [13] Matrix_1.7-1 BiocManager_1.30.25 httr_1.4.7 #> [16] spam_2.11-0 UCSC.utils_1.2.0 codetools_0.2-20 -#> [19] textshaping_0.4.0 jquerylib_0.1.4 abind_1.4-8 +#> [19] textshaping_0.4.1 jquerylib_0.1.4 abind_1.4-8 #> [22] cli_3.6.3 crayon_1.5.3 rlang_1.1.4 -#> [25] XVector_0.46.0 parallelly_1.39.0 future.apply_1.11.3 +#> [25] XVector_0.46.0 parallelly_1.41.0 future.apply_1.11.3 #> [28] DelayedArray_0.32.0 cachem_1.1.0 yaml_2.3.10 #> [31] S4Arrays_1.6.0 tools_4.4.2 parallel_4.4.2 #> [34] GenomeInfoDbData_1.2.13 globals_0.16.3 R6_2.5.1 #> [37] lifecycle_1.0.4 zlibbioc_1.52.0 fs_1.6.5 #> [40] htmlwidgets_1.6.4 ragg_1.3.3 desc_1.4.3 -#> [43] progressr_0.15.0 pkgdown_2.1.1 bslib_0.8.0 +#> [43] progressr_0.15.1 pkgdown_2.1.1 bslib_0.8.0 #> [46] Rcpp_1.0.13-1 systemfonts_1.1.0 xfun_0.49 #> [49] knitr_1.49 htmltools_0.5.8.1 rmarkdown_2.29 #> [52] dotCall64_1.2 compiler_4.4.2 diff --git a/articles/design.html b/articles/design.html index abcd14b..033debb 100644 --- a/articles/design.html +++ b/articles/design.html @@ -8,8 +8,8 @@ Design • anndataR - - + + @@ -85,9 +85,9 @@

Design

Ideally, this package will be a complete replacement for all of these packages, and will be the go-to package for working with AnnData files in R.

-
-

Desired feature list -

+
+

Desired feature list +