From 385c1ac4644900b11fbee1f63cb6d62d982514b3 Mon Sep 17 00:00:00 2001 From: Daniel Svensson Date: Fri, 22 May 2020 15:00:55 +0200 Subject: [PATCH 1/3] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index ac1f27e..cb6efa5 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,6 @@ # StringMeUp -A post-processing tool to reclassify [Kraken 2] output based on the confidence score and/or minimizer hit groups. +A post-processing tool to reclassify [Kraken 2] output based on the confidence score and/or minimum minimizer hit groups. ## Usage From 9fa24f6253ea7d51e902bfd866e9b6d0a8b9a7f6 Mon Sep 17 00:00:00 2001 From: Daniel Svensson Date: Tue, 26 May 2020 12:18:00 +0200 Subject: [PATCH 2/3] Update README.md --- README.md | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/README.md b/README.md index cb6efa5..b21b015 100644 --- a/README.md +++ b/README.md @@ -2,6 +2,11 @@ A post-processing tool to reclassify [Kraken 2] output based on the confidence score and/or minimum minimizer hit groups. +## Installation +StringMeUP is available to install through conda. Simply run the following command to install it: + +`conda install -c bioconda stringmeup` + ## Usage A good start is to run `stringmeup --help`. From 4e6b5d7a68f0788e13a3b7b238c161bf088fde97 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Andreas=20Sj=C3=B6din?= Date: Thu, 28 May 2020 23:43:08 +0200 Subject: [PATCH 3/3] Update README.md Correct conda installation instructions --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index b21b015..dacdcf0 100644 --- a/README.md +++ b/README.md @@ -5,7 +5,7 @@ A post-processing tool to reclassify [Kraken 2] output based on the confidence s ## Installation StringMeUP is available to install through conda. Simply run the following command to install it: -`conda install -c bioconda stringmeup` +`conda install -c conda-forge -c bioconda stringmeup` ## Usage