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asmacdoasmacdo
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disable report
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‎.github/manifests/disk-usage-report-job.yaml

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@@ -12,7 +12,7 @@ spec:
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spec:
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containers:
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- name: disk-usage-report
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image: IMAGE_PLACEHOLDER
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image: dandiarchive/dandihub-report-generator:latest
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args:
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- "/home/"
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volumeMounts:

‎.github/workflows/report.yaml

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name: Generate Data Usage Report
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on:
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pull_request:
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branches:
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- main
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jobs:
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generate_data_usage_report:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout code
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uses: actions/checkout@v3
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- name: Log in to DockerHub
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uses: docker/login-action@v2
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with:
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username: ${{ secrets.DOCKERHUB_USERNAME }}
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password: ${{ secrets.DOCKERHUB_TOKEN }}
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- name: Build and push Docker image
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uses: docker/build-push-action@v3
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with:
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context: .
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file: images/Dockerfile.dandihub_report_generator
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push: true
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tags: ${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest
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- name: Configure AWS credentials
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uses: aws-actions/configure-aws-credentials@v3
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with:
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aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
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aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
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aws-region: us-east-2
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- name: Assume ProvisioningRole
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run: |
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CREDS=$(aws sts assume-role --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} --role-session-name "GitHubActionsSession")
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export AWS_ACCESS_KEY_ID=$(echo $CREDS | jq -r '.Credentials.AccessKeyId')
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export AWS_SECRET_ACCESS_KEY=$(echo $CREDS | jq -r '.Credentials.SecretAccessKey')
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export AWS_SESSION_TOKEN=$(echo $CREDS | jq -r '.Credentials.SessionToken')
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- name: Configure kubectl with AWS EKS
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run: |
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aws eks update-kubeconfig --name eks-dandihub --region us-east-2 --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }}
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# TODO remove
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- name: Sanity check
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run: |
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kubectl get pods -n jupyterhub
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# - name: Deploy Hello World Pod
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# run: |
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# kubectl apply -f .github/manifests/hello-world-pod.yaml
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#
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# - name: Wait for Hello World Pod to complete
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# run: |
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# kubectl wait --for=condition=Ready pod/hello-world-pod --timeout=300s # 5 minutes
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# continue-on-error: true # Allow the workflow to continue even if this step fails
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#
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# - name: Get Hello World Pod logs
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# run: |
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# kubectl logs hello-world-pod
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# if: ${{ success() }} # Only run this step if the previous step was successful
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#
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# - name: Delete Hello World Pod
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# run: |
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# kubectl delete pod hello-world-pod
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# if: ${{ always() }} # Always run this step, even if other steps fail
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#
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- name: Replace image placeholder in manifest
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run: |
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sed -i 's|IMAGE_PLACEHOLDER|'"${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest"'|' .github/manifests/disk-usage-report-job.yaml
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- name: Deploy Disk Usage Report Job
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run: |
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kubectl apply -f .github/manifests/disk-usage-report-job.yaml
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# TODO should timeout be longer?
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- name: Wait for Disk Usage Report Job to complete
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run: |
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kubectl wait --for=condition=complete job/disk-usage-report-job --timeout=360s -n jupyterhub
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continue-on-error: true
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# continue-on-error for previous steps so we delete the job
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- name: Delete Disk Usage Report Job
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run: |
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kubectl delete job disk-usage-report-job -n jupyterhub
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# - name: Clone dandi-hub-usage-reports repository
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# run: |
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# git clone https://github.com/dandi/dandi-hub-usage-reports.git
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#
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# - name: Copy report file to repository, commit and push report
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# run: |
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# cd dandi-hub-usage-reports
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# DATE=$(date +'%Y-%m-%d')
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# mv ../du_report.json $DATE_du_report.json
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# git config --global user.name "GitHub Actions"
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# git config --global user.email "[email protected]"
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# git add $DATE_du_report.json
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# git commit -m "Add disk usage report for $DATE"
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# git push https://${{ secrets.GITHUB_TOKEN }}@github.com/dandi/dandi-hub-usage-reports.git
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# name: Generate Data Usage Report
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#
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# on:
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# pull_request:
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# branches:
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# - main
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#
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# jobs:
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# generate_data_usage_report:
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# runs-on: ubuntu-latest
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#
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# steps:
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# - name: Checkout code
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# uses: actions/checkout@v3
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#
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# - name: Log in to DockerHub
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# uses: docker/login-action@v2
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# with:
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# username: ${{ secrets.DOCKERHUB_USERNAME }}
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# password: ${{ secrets.DOCKERHUB_TOKEN }}
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#
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# - name: Build and push Docker image
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# uses: docker/build-push-action@v3
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# with:
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# context: .
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# file: images/Dockerfile.dandihub_report_generator
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# push: true
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# tags: ${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest
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#
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# - name: Configure AWS credentials
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# uses: aws-actions/configure-aws-credentials@v3
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# with:
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# aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
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# aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
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# aws-region: us-east-2
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#
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# - name: Assume ProvisioningRole
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# run: |
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# CREDS=$(aws sts assume-role --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} --role-session-name "GitHubActionsSession")
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# export AWS_ACCESS_KEY_ID=$(echo $CREDS | jq -r '.Credentials.AccessKeyId')
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# export AWS_SECRET_ACCESS_KEY=$(echo $CREDS | jq -r '.Credentials.SecretAccessKey')
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# export AWS_SESSION_TOKEN=$(echo $CREDS | jq -r '.Credentials.SessionToken')
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#
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# - name: Configure kubectl with AWS EKS
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# run: |
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# aws eks update-kubeconfig --name eks-dandihub --region us-east-2 --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }}
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#
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# # TODO remove
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# - name: Sanity check
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# run: |
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# kubectl get pods -n jupyterhub
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#
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# # - name: Deploy Hello World Pod
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# # run: |
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# # kubectl apply -f .github/manifests/hello-world-pod.yaml
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# #
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# # - name: Wait for Hello World Pod to complete
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# # run: |
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# # kubectl wait --for=condition=Ready pod/hello-world-pod --timeout=300s # 5 minutes
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# # continue-on-error: true # Allow the workflow to continue even if this step fails
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# #
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# # - name: Get Hello World Pod logs
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# # run: |
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# # kubectl logs hello-world-pod
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# # if: ${{ success() }} # Only run this step if the previous step was successful
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# #
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# # - name: Delete Hello World Pod
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# # run: |
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# # kubectl delete pod hello-world-pod
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# # if: ${{ always() }} # Always run this step, even if other steps fail
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# #
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# - name: Replace image placeholder in manifest
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# run: |
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# sed -i 's|IMAGE_PLACEHOLDER|'"${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest"'|' .github/manifests/disk-usage-report-job.yaml
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#
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# - name: Deploy Disk Usage Report Job
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# run: |
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# kubectl apply -f .github/manifests/disk-usage-report-job.yaml
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#
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# # TODO should timeout be longer?
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# - name: Wait for Disk Usage Report Job to complete
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# run: |
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# kubectl wait --for=condition=complete job/disk-usage-report-job --timeout=360s -n jupyterhub
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# continue-on-error: true
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#
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# # continue-on-error for previous steps so we delete the job
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# - name: Delete Disk Usage Report Job
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# run: |
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# kubectl delete job disk-usage-report-job -n jupyterhub
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#
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# # - name: Clone dandi-hub-usage-reports repository
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# # run: |
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# # git clone https://github.com/dandi/dandi-hub-usage-reports.git
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# #
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# # - name: Copy report file to repository, commit and push report
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# # run: |
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# # cd dandi-hub-usage-reports
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# # DATE=$(date +'%Y-%m-%d')
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# # mv ../du_report.json $DATE_du_report.json
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# # git config --global user.name "GitHub Actions"
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# # git config --global user.email "[email protected]"
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# # git add $DATE_du_report.json
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# # git commit -m "Add disk usage report for $DATE"
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# # git push https://${{ secrets.GITHUB_TOKEN }}@github.com/dandi/dandi-hub-usage-reports.git

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