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index.html
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<!doctype html>
<html lang="en">
<head>
<!-- Required meta tags -->
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1, shrink-to-fit=no">
<!-- CSS and JS libraries-->
<link rel="stylesheet" href="lib/css/bootstrap.min.css">
<link rel="stylesheet" href="lib/css/bootstrap-table.min.css">
<link rel="stylesheet" href="lib/css/tabulator_bootstrap4.min.css">
<link rel="stylesheet" href="lib/css/jquery.dataTables.min.css">
<script src="lib/js/jquery-3.3.1.slim.min.js"></script>
<script src="lib/js/bootstrap.min.js"></script>
<script src="lib/js/jquery.min.js"></script>
<script src="lib/js/d3.min.js"></script>
<script src="lib/js/markdown-it.min.js"></script>
<script src="lib/js/tabulator.min.js"></script>
<script src="lib/js/papaparse.min.js"></script>
<script src="lib/js/jquery.dataTables.min.js"></script>
<link rel="stylesheet" href="css/table.css">
<script src="js/load_sections.js"></script>
<script src="js/functions.js"></script>
<script src="js/populate.js"></script>
<script src="js/top_navbar.js"></script>
<title>Immune Repertoire | VisualizIRR</title>
</head>
<body>
<div id="top_navbar"></div>
<div class="container-fluid">
<div class="row">
<nav class="col-md-2 d-none d-md-block bg-light sidebar collapse bd-links">
<div class="sidebar-sticky sticky-top" style="padding-top: 1rem">
<ul class="nav flex-column">
<li class="nav-item" style='padding-top: 40px;'>
<a class="nav-link" href="#cohort-select" style="font-size: 1rem">Cohort Selection</a>
</li>
<li class="nav-item">
<a class="nav-link" href="#overview-figure" style="font-size: 1rem">VisualizIRR Overview Figure</a>
</li>
<li class="nav-item">
<a class="nav-link" href="#documentation" style="font-size: 1rem">VisualizIRR Documentation</a>
</li>
</ul>
</div>
</nav>
<main role="main" class="col-md-9 ml-sm-auto col-lg-10 px-4" style="margin-bottom: 6rem;margin-top: 1rem;">
<!-- Cohort/Sample information -->
<div class="d-flex justify-content-between flex-wrap flex-md-nowrap align-items-center pt-3 pb-2 mb-3">
<h1 class="h2">Home</h1>
</div>
<div name='cohort-select' id='cohort-select'></div>
<div class="content_row" id="cohort_table" style="display:none;">
<h2 class="h3">Cohort Selection Table</h2>
<h6 class="current-cohort-indicator" style="font-weight: bold;"></h6>
<table id="cohort-select-table" class="display"></table>
</div>
<div class="content_row static mb-3" id="cohort_select">
<h2 class="h3">Cohort Path Selection</h2>
<div class="input-group mb-2">
<input id="path_field" type="text" class="form-control" placeholder="Default: data/" aria-label="Enter path"
aria-describedby="basic-addon2">
<div class="input-group-append">
<button id="path_select" class="btn btn-secondary" type="button">Select</button>
</div>
</div>
</div>
<div name='overview-figure' id="overview-figure" style="display:none;">
<h2 class="h3">Overview Figure</h2>
<img class="rounded mx-auto d-block" src="img/overview.png">
</div>
<div name='documentation' class="content_row static" id="documentation">
<h2 class="h3">Documentation</h2>
<div id="markdown"></div>
</div>
</main>
</div>
</div>
<script type="text/javascript">
$(window).on("load", function () {
if (location.hash == '#documentation') {
setTimeout(function () {
document.getElementById('documentation').scrollIntoView({
behavior: 'auto'
});
}, 250);
}
});
</script>
</body>
</html>