python-test.yml

name: Install and Test with Pip

on:
  pull_request:
  push:
    branches: [ "main", "master" ]
  workflow_dispatch:


jobs:
  build:

    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.9", "3.10", "3.11"]

    steps:
    - uses: actions/checkout@v3
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v3
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install dependencies
      run: |
        # sudo apt install -y xvfb x11-utils libxkbcommon-x11-0
        sudo apt-get -qq install libxcb-xinerama0 pyqt5-dev-tools
        python -m pip install --upgrade pip
        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
    - name: Install test dependencies
      run: |
        pip install -r requirements-dev.txt
        pip install git+https://github.com/cortex-lab/phy.git
    - name: Test with pytest utils
      env:
        QT_DEBUG_PLUGINS: 1
      run: |
        ulimit -c unlimited
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/utils

    - name: Test with pytest plot
      env:
        QT_DEBUG_PLUGINS: 1
      run: |
        ulimit -c unlimited
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/plot/tests

    - name: Test with pytest gui
      env:
        QT_DEBUG_PLUGINS: 1
      run: |
        ulimit -c unlimited
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/gui/tests/test_actions.py
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/gui/tests/test_gui.py
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/gui/tests/test_state.py

    - name: Test with pytest cluster
      env:
        QT_DEBUG_PLUGINS: 1
      run: |
        ulimit -c unlimited
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/cluster/tests/test_clustering.py
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/cluster/tests/test_history.py
        sudo xvfb-run --auto-servernum `which coverage` run -m pytest phy/cluster/tests/test_utils.py