Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Transposing F matrix in spike deconvolution #187

Open
XuanweiLi opened this issue Nov 10, 2022 · 0 comments
Open

Transposing F matrix in spike deconvolution #187

XuanweiLi opened this issue Nov 10, 2022 · 0 comments

Comments

@XuanweiLi
Copy link

XuanweiLi commented Nov 10, 2022 •
edited
Loading

Hi developers, I noticed that in the spike deconvolution stage, specifically in GUI, the deconvolution seems to be weird, having multiple spikes even in the relaxing phase. If I do it manually, one should look like this down below.

original
Screenshot 2022-11-11 at 00 16 08

manual
Screenshot 2022-11-11 at 00 19 01

Screenshot 2022-11-11 at 00 20 16

I guess there is possibly a wrong transpose somewhere before the deconvolution. It seems like it is done across the ROI instead of across time points.

Please correct me if I am wrong.
@XuanweiLi XuanweiLi reopened this Nov 11, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@XuanweiLi